GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:37:05

Sequence gi568815592r:36395787_36640202 : 244416 bp : 43.66% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   4798   4668  131  2  2  100   78   101 0.140  10.71
 1.01 Init -  30179  30128   52  2  1   69  110    18 0.247   3.42
 1.00 Prom -  32833  32794   40                              -3.16

 2.00 Prom +  35391  35430   40                              -3.56
 2.01 Init +  46809  46924  116  2  2   62  102    78 0.398   6.28
 2.02 Intr +  53077  53228  152  1  2   66   73    60 0.211   2.11
 2.03 Intr +  79003  79276  274  2  1   78   88   155 0.655  11.10
 2.04 Intr +  83335  83437  103  1  1   44   70   162 0.915  10.18
 2.05 Intr +  83805  83925  121  2  1   94   80    64 0.999   6.27
 2.06 Intr +  85776  85973  198  1  0  111   19   269 0.988  21.62
 2.07 Intr +  88928  89038  111  0  0  111   93   103 0.999  13.45
 2.08 Term +  91097  91389  293  0  2   88   49   165 0.971   8.11
 2.09 PlyA +  95337  95342    6                               1.05

 3.19 PlyA -  98124  98119    6                               1.05
 3.18 Term - 100128  99998  131  1  2   79   38   146 0.954   7.04
 3.17 Intr - 101019 100925   95  2  2   51   92    89 0.809   5.21
 3.16 Intr - 102700 102577  124  2  1   75   52    39 0.746  -1.36
 3.15 Intr - 104204 104087  118  2  1   87  123   107 0.896  14.14
 3.14 Intr - 105514 105461   54  1  0   91   80    22 0.555   0.88
 3.13 Intr - 110858 110797   62  0  2   88   94    29 0.634   1.95
 3.12 Intr - 111816 111714  103  0  1  110   89   -23 0.230  -0.25
 3.11 Intr - 113277 113158  120  0  0   97   50    45 0.305   2.29
 3.10 Intr - 119706 119552  155  1  2   89   67    99 0.122   7.69
 3.09 Intr - 122054 121931  124  2  1   40   76    31 0.420  -2.74
 3.08 Intr - 126031 125948   84  1  0   79  103    30 0.595   3.62
 3.07 Intr - 128677 128555  123  1  0   48   83    68 0.838   3.08
 3.06 Intr - 129856 129805   52  0  1   99   76    79 0.975   6.71
 3.05 Intr - 144421 144286  136  2  1  117   88    39 0.849   6.43
 3.04 Intr - 150931 150838   94  1  1   34   99    55 0.628   0.74
 3.03 Intr - 151597 151404  194  2  2   96  105    47 0.741   6.41
 3.02 Intr - 153619 153508  112  1  1  -61   -7   276 0.298   3.15
 3.01 Init - 162437 162423   15  2  0   75   99    16 0.220   1.45
 3.00 Prom - 179059 179020   40                              -4.56

 4.00 Prom + 198542 198581   40                              -2.66
 4.01 Init + 200977 201182  206  0  2   62   55   168 0.947   9.22
 4.02 Intr + 203063 203197  135  2  0   94   80    61 0.946   5.58
 4.03 Intr + 204217 204437  221  1  2   55   23   138 0.888   1.95
 4.04 Intr + 205366 205404   39  2  0  127   99    12 0.889   4.40
 4.05 Intr + 217942 218057  116  2  2   66   61   133 0.654   8.57
 4.06 Intr + 222671 222869  199  1  1   55   45    64 0.314  -2.28
 4.07 Term + 226525 226730  206  2  2   37   47   215 0.706   9.83
 4.08 PlyA + 226821 226826    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:36395787_36640202|GENSCAN_predicted_peptide_1|61_aa
MTQLVSSQPVPAMSRNPDHNLLSQPKEHSIVQKHHQEEIIHKLAMQLRHIGDNIDHRMVR
E

>gi568815592r:36395787_36640202|GENSCAN_predicted_CDS_1|183_bp
atgacccaacttgtcagctcccagccagttccagccatgtcaaggaacccagatcataat
ctactttctcagcccaaggagcatagcattgttcagaagcatcaccaggaggaaataatt
cacaagttggccatgcagctgagacacattggggacaacattgatcataggatggttcga
gag

>gi568815592r:36395787_36640202|GENSCAN_predicted_peptide_2|455_aa
MYIQGSDFRANAFKQLQYSYYATSNLAPRMGRSGFHIFGGFVVLLTSGVKPQTFSVSVTA
LKGGVSGVVCSSRWVRGLADFRSEAADLCNLSLDYASQPANLQFPHIMPLAEDIKGSCFQ
SGNKRNHEPFIAPERFGNSSVGFGSNSHSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLG
RMFGPGREYNFTRPNEKGEYEIAEGISATVFRTVLDYYKTGIINCPDGISIPDLRDTCDY
LCINFDFNTIRCQDLSALLHELSNDGAHKQFDHYLEELILPIMVGCAKKGERECHIVVLT
DEDSVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGY
PTCKEKIKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVAAGDD
VLEDQEILMHHPPQVDELDRLNAPLSQMASNDFQD

>gi568815592r:36395787_36640202|GENSCAN_predicted_CDS_2|1368_bp
atgtatatccagggtagtgactttcgagcaaatgcgtttaagcaactccagtattcttac
tacgctacctccaacctcgctccacgcatggggagatcagggttccacattttcggtggg
ttcgtggtcttgctgacttcaggagtgaagccgcagaccttctcagtgagtgttacagct
cttaaaggtggcgtgtctggagttgtttgttcctcccggtgggttcgtggtcttgctgac
ttcaggagtgaagctgcagacctttgcaacctctcacttgactatgcctctcagccagca
aatcttcagttccctcacataatgccccttgctgaagacatcaaaggttcttgcttccaa
agtgggaataaacggaaccatgaaccttttattgctccagaaagatttggaaacagtagt
gtgggctttggcagtaattcccattcccaagcaccagagaaagtgacgcttcttgtagat
ggcacacgttttgttgtgaatccacagattttcactgctcatccggataccatgctggga
aggatgtttggaccaggaagagagtacaacttcactcggcccaatgagaagggagagtat
gagattgctgaaggcatcagtgcaactgtatttcgcacagtgctggattattacaaaacc
ggtatcatcaattgtcctgatggcatctctatcccagatcttagagatacttgtgattat
ctctgcattaattttgacttcaacactatccgatgtcaagatctgagtgctttactccat
gaactgtctaatgacggtgctcataagcagtttgatcactacctcgaagagctcatcttg
cccatcatggtgggctgtgccaagaaaggagaacgagagtgccacattgttgtgctgacg
gatgaggattctgtggactgggatgaagaccaccctccaccaatgggggaggaatattcc
caaattctttatagctccaagctctacagattcttcaaatatattgagaatagggatgtt
gcaaaaacagtgttaaaggaacggggcctaaaaaacattcgcattggaattgaaggttac
cctacctgtaaagaaaaaattaagagaaggcctggcggccggtctgaagtcatctataat
tatgtacaacgccccttcatccagatgtcatgggaaaaggaagaagggaagagtcgccat
gtggatttccagtgtgttcgaagcaaatccctcacgaatctggtagctgctggagatgat
gtcttggaggaccaggagatattaatgcatcacccaccccaagtggatgaacttgaccgg
ctaaatgccccactttctcagatggcttctaacgactttcaggattag

>gi568815592r:36395787_36640202|GENSCAN_predicted_peptide_3|631_aa
MQKKLKKEKEKEKEKKKKKKKKKKKKKKKKRKKKKKKRLAGHVGTLPVVLTRNRLLPPVS
ESLTRPLPSLARWLPPPGLRQPSSRDYWPKGRLRLSAVPSPASPWALDTGLQISFKSQEK
AGKILKKRVEKQQPEEKVAAMAMTGSTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEE
REMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAF
GEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL
NLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL
DSKATRRREERRPFQEPRLRGFLSQCCDTPFRALRFLASPSFQGHVKLSDFGLCTGLKKA
HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLSWYVRVEYWNAENVSLGQAFST
VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLT
FPPEVPISEKAKDLILRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYK
NKDWVFINYTYKRFEGLTARGAIPSYMKAAK

>gi568815592r:36395787_36640202|GENSCAN_predicted_CDS_3|1896_bp
atgcagaagaaactgaagaaggagaaggagaaggagaaggagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaggaagaagaagaagaagaaaagattagct
gggcatgttggaacgcttcctgttgtcctcacccgtaaccgcctgttgccccctgtctca
gagtccctcacgcgtcccctcccgtctttggctcgttggctgccgccgccggggcttcgc
cagccttcaagtcgagactactggccgaaggggcgtctgcggctctccgccgtccccagc
cctgcctctccctgggctctggatactgggcttcagataagcttcaaatcacaggaaaag
gcagggaaaattcttaagaagagagtggaaaagcaacagccagaggaaaaagtcgcagcc
atggcaatgacaggctcaacaccttgctcatccatgagtaaccacacaaaggaaagggtg
acaatgaccaaagtgacactggagaatttttatagcaaccttatcgctcaacatgaagaa
cgagaaatgagacaaaagaagttagaaaaggtgatggaagaagaaggcctaaaagatgag
gagaaacgactccggagatcagcacatgctcggaaggaaacagagtttcttcgtttgaag
agaacaagacttggattggaagattttgagtccttaaaagtaataggcagaggagcattt
ggtgaggtacggcttgttcagaagaaagatacgggacatgtgtatgcaatgaaaatactc
cgtaaagcagatatgcttgaaaaagagcaggttggccacattcgtgcggagcgtgacatt
ctagtggaggcagacagtttgtgggttgtgaaaatgttctatagttttcaggataagcta
aacctctacctaatcatggagttcctgcctggaggggacatgatgaccttgttgatgaaa
aaagacactctgacagaagaggagactcagttttatatagcagaaacagtattagccata
gactctattcaccaacttggattcatccacagagacatcaaaccagacaaccttcttttg
gacagcaaggcaacaagaaggagagaagagcggcggcccttccaggagcccagacttagg
ggcttcctgagccagtgctgtgacaccccctttagggctctgcggtttctggcatctcca
agcttccagggccatgtgaaactttctgactttggtctttgcacaggactgaaaaaagca
cataggacagaattttataggaatctgaaccacagcctccccagtgatttcactttccag
aacatgaattccaaaaggaaagcagaaacctggaaaagaaatagacgtcagctatcctgg
tatgttagagtagaatactggaatgcagaaaatgtttctcttggtcaggccttctccaca
gtaggcactcctgactacattgctcctgaggtgttcatgcagaccgggtacaacaagctc
tgtgattggtggtcgcttggggtgatcatgtatgagatgctcatcggctacccacctttc
tgttctgagacccctcaagagacatataagaaggtgatgaactggaaagaaactttgact
tttcctccagaagttcccatctctgagaaagccaaggatctaattttgagagagagacct
gctgcaatatctattgaaatcaaaagcattgatgatacctcaaacttcgatgagtttcca
gaatctgatattcttaagccaacagtggccacaagtaatcatcctgagactgactacaag
aacaaagactgggtcttcatcaattacacgtacaagcgctttgagggcctgactgcaagg
ggggcaataccttcctacatgaaagcagcaaaatag

>gi568815592r:36395787_36640202|GENSCAN_predicted_peptide_4|373_aa
MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAA
DAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRSLLSNLN
QIGSSHLDRPHIPGQSAQLFIYQMSSQQLQQQPSANKKAGKIHNTPFANQLNPTQHLAKP
FQQILPGHLQEGEASLAAGAEIATATPAFSDHNPDQSAAINTEGRPSTSKVMWLKAYMIN
PEQVPQEQVRGVSPVGKAFLRGSEAVSQERGEAPLSQSCSAHLAAAATHLYAPSWYITIT
TGSHDRNTEVGSSHKEVASSIIKKLIPAHVDGFEEFKTLVEEVMKDVVEIARELKLESGD
VTGSTFSSLAIPT

>gi568815592r:36395787_36640202|GENSCAN_predicted_CDS_4|1122_bp
atgcatcgtgattcctgtccattggactgtaaggtttatgtaggcaatcttggaaacaat
ggcaacaagacggaattggaacgggcttttggctactatggaccactccgaagtgtgtgg
gttgctagaaacccacccggctttgcttttgttgaatttgaagatccccgagatgcagct
gatgcagtccgagagctagatggaagaacactatgtggctgccgtgtaagagtggaactg
tcgaatggtgaaaaaagaagtagaaatcgtggcccacctccctcttggggtcgtcgccct
cgagatgattatcgtaggaggagtcctccacctcgtcgcagccttctctccaaccttaac
caaatcggcagcagccacctcgaccgcccacacattcctggccaatcagctcagctgttt
atttaccaaatgtcttcacaacaactacagcagcagccttcggctaacaaaaaagcagga
aaaatccacaacacccccttcgccaaccaactaaatccaacgcaacatctggcaaaacct
tttcagcaaattcttcctggccatctccaagaaggagaagcttctctcgcagccggagca
gaaattgccacagccactccagccttcagcgaccacaatcctgatcagtcagcagccatc
aacactgagggaagaccctccaccagcaaggttatgtggctgaaggcttatatgattaat
ccagagcaggtcccccaggagcaggttcgtggcgtatcaccagtggggaaggcttttctc
agaggctctgaggcagtgtctcaagaaaggggggaggctccgctttctcagagttgcagt
gctcaccttgctgctgctgccacacatctgtatgcgccttcctggtacatcaccatcacc
acaggctctcatgatagaaacacagaagttggttccagccacaaggaagtggcttcatcc
atcatcaagaagttgattccagcccacgtggatggctttgaggagttcaagactttagtg
gaggaagtgatgaaagatgtggtggaaatagcaagagaactaaaactggagtctggagat
gtgacaggctccactttcagttctcttgctattcccacatga