GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:18:48

Sequence gi568815579f:34072643_34321738 : 249096 bp : 44.04% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   3193   3188    6                               1.05
 1.01 Sngl -  20701  19880  822  1  0   53   44   586 0.653  46.45
 1.00 Prom -  21147  21108   40                              -6.16

 2.00 Prom +  24452  24491   40                              -4.36
 2.01 Init +  30257  30316   60  1  0   70   64    53 0.212   2.35
 2.02 Intr +  38413  38482   70  0  1  123   78    21 0.418   3.35
 2.03 Intr +  54457  54605  149  2  2   58   67   153 0.047  10.15
 2.04 Intr +  70544  70606   63  1  0   64   86    41 0.015   0.41
 2.05 Intr +  92786  92902  117  1  0   66   31   118 0.171   4.56
 2.06 Term +  95480  95569   90  1  0   68   35    51 0.078  -4.48
 2.07 PlyA +  95589  95594    6                               1.05

 3.00 Prom +  96529  96568   40                              -7.26
 3.01 Init +  99784  99859   76  0  1   90   36   190 0.915  13.25
 3.02 Intr +  99978 100121  144  1  0   34  107   398 0.972  36.55
 3.03 Intr + 124002 124121  120  1  0   75   76    97 0.476   7.67
 3.04 Intr + 136376 136409   34  0  1   39  121    13 0.067  -3.02
 3.05 Intr + 142482 142658  177  0  0   60   60   120 0.088   5.43
 3.06 Intr + 146804 146931  128  2  2  -26  121    83 0.080   0.52
 3.07 Intr + 147064 147235  172  2  1   85   60   186 0.633  14.50
 3.08 Intr + 148865 149096  232  2  1   50  110    48 0.198   0.98
 3.09 Term + 153766 153789   24  0  0  113   42    26 0.221  -1.28
 3.10 PlyA + 154071 154076    6                               1.05

 4.04 PlyA - 154150 154145    6                               1.05
 4.03 Term - 164933 164863   71  0  2   95   48    75 0.121   2.30
 4.02 Intr - 182382 182228  155  2  2   46   36    96 0.211  -0.08
 4.01 Init - 182530 182466   65  1  2   56   91   147 0.460  10.43
 4.00 Prom - 219684 219645   40                              -2.86

 5.02 PlyA - 219723 219718    6                               1.05
 5.01 Sngl - 223972 223634  339  1  0   79   37   403 0.800  30.33
 5.00 Prom - 224799 224760   40                              -9.46

 6.00 Prom + 227193 227232   40                              -8.16
 6.01 Init + 227862 228374  513  2  0   62  115   526 0.577  47.60
 6.02 Intr + 247265 247474  210  1  0  107   76    87 0.010   8.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:34072643_34321738|GENSCAN_predicted_peptide_1|273_aa
MGGPLSVPITAVASGPKQHLKRVAAPQRWMLDKLTGVFAARPSTGPQKLRECLPHIFLRN
RLKYALTGDEVKKICMQWFIKVDGKVRTDITYPTGFMDVISIDKTGEGFRLIYGINCRFA
VHRVTPEEVKYKLCKMRKIFVCTKGTPHLVIHDAHTIRHPDSLIKVNDTIQIDLETGNIT
ALKFDTGNLCLVTGGANWGRIGVITNRERHPGSFDTIHVKDANSNSFSIIFVIDKGNKPC
ISLPRGKGIRFTIAEGRDKRLQPNRAVDEMVCG

>gi568815579f:34072643_34321738|GENSCAN_predicted_CDS_1|822_bp
atgggaggtcctctttctgtgcctattacagctgtggcttccggtcccaagcagcatctg
aagcgggtagcagctccacaacgttggatgctggataaattgactggtgtgtttgctgct
cgtccatccactggtccccaaaagctgagagagtgtctccctcatattttcctgaggaac
agacttaaatatgccctgacaggagatgaagtgaagaagatttgcatgcagtggttcatt
aaggtagatggcaaggttcgaactgatataacctaccctactggatttatggatgtcatc
agcattgacaagacgggagagggtttccgtctgatctatggcatcaattgtcgctttgct
gtacatcgtgttacacctgaggaagtcaagtacaagttatgcaaaatgagaaaaatcttt
gtgtgcacaaaaggaacccctcacctggtgattcacgatgctcacactatccgccaccct
gattccctcattaaagtgaacgacaccattcagattgatttggagactggcaacatcact
gctttgaagttcgacactggtaacctgtgtttggtgactggaggtgctaactggggaaga
attggtgtgatcaccaatagagagaggcaccctggatcttttgacacgattcacgtgaaa
gatgccaacagcaacagcttttccatcatttttgttattgacaagggcaacaaaccatgt
atttctcttccccgaggaaagggtatccgcttcaccattgctgaagggagagacaagaga
ctgcagccaaacagagcagtggatgaaatggtctgtgggtga

>gi568815579f:34072643_34321738|GENSCAN_predicted_peptide_2|182_aa
MSDQDSSNDKVIKNRDSITQISKAHSKGWLGPQSTLSLAENNAVGSPAAAPQQPGLRAQM
ATTAADVAVGSAVGHTLGHAVTGGFSGGSNAEPAPKLIAQDVTVLNTVGNCYTVKELIVL
FQEVKLANRIYFLFQSKATLLPDNPSQRQNTTGGHTNYEIDAIAWCPNRHFQLNKCKIIC
IY

>gi568815579f:34072643_34321738|GENSCAN_predicted_CDS_2|549_bp
atgtctgaccaggactcctcaaatgacaaagtcatcaaaaacagggacagtattactcag
atttctaaggcccactccaaaggctggcttggtcctcagtccacactctctcttgcagaa
aacaatgcagttggctctcctgctgctgctccccagcagccaggtctgagggcccagatg
gcaaccactgcagctgacgtggctgtgggctctgctgtggggcacacactgggccacgcc
gtcaccgggggcttcagtggaggaagtaatgctgagcctgcccctaaattaattgcacag
gatgttactgtactgaacactgtgggcaactgttacacagtaaaagaactaatcgtgctg
ttccaagaagtgaagttagccaacaggatctacttcctctttcaatccaaggccacgctc
ctcccagacaaccccagccaacgacagaacacaacagggggtcataccaattatgaaata
gacgcaattgcttggtgtcccaacaggcacttccagctcaacaagtgcaaaattatttgc
atctattag

>gi568815579f:34072643_34321738|GENSCAN_predicted_peptide_3|368_aa
MPRAAAAAAAAAAAAPRLEGGRLGEAGSGGGGAMSGGTPYIGSKISLISKAEIRYEGILY
TIDTENSTVALAKGSSTSSFQSMGSYGPFGRMPTYSQFSPSSLVGQQFGAVGVGYKISKN
TVISRSLKPSVRPFEKKPNHGTSSADRLSPLTCSSSCWEKESCINQAFAICQPKGRRESG
AQARGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGE
DKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAET
FGIPLRPNRGRGGYRGRGGLGFRGGRGRGGGRGGTFTAPRGFRGGFRGGRGGREFADFEY
RKTTAFGP

>gi568815579f:34072643_34321738|GENSCAN_predicted_CDS_3|1107_bp
atgccccgcgccgccgccgctgccgccgccgccgccgccgccgcgccgcggcttgagggc
gggaggctgggggaggctgggagcggcggcggcggcgccatgagcgggggcaccccttac
atcggcagcaagatcagcctcatctccaaggcggagatccgctacgagggcatcctctac
accatcgacaccgaaaactccaccgtagcccttgccaaaggctcatcgacttcttcattc
cagtccatgggttcttatggacctttcggcaggatgcccacatacagtcagttcagtccg
agttccttagttgggcagcagtttggtgctgttggtgttggatacaagatctctaaaaac
acagttatctcaaggtcgctcaagccctcagttagaccctttgagaaaaagcccaaccat
ggaacaagcagtgcagaccgcctcagcccacttacctgctccagcagctgttgggagaag
gagtcctgtatcaaccaggcctttgccatctgccagccaaaaggcaggagagaatcagga
gcacaggcgaggggaagatttggtattcggcgagatgggccaatgaaatttgagaaagac
tttgactttgaaagtgcaaatgcacaattcaacaaggaagagattgacagagagtttcat
aataaacttaaattaaaagaagataaacttgagaaacaggagaagcctgtaaatggtgaa
gataaaggagactcaggagttgatacccaaaacagtgaaggaaatgccgatgaagaagat
ccacttggacctaattgctattatgacaaaactaaatccttctttgataatatttcttgt
gatgacaatagagaacggagaccaacctgggctgaagaaagaagattaaatgctgaaaca
tttggaatcccacttcgtccaaaccgtggccgtgggggatacagaggcagaggaggtctt
ggtttccgtggtggcagagggcgtggtggtggcagaggtggtaccttcactgcccctcga
ggatttcgcggtggattcagaggaggtcgtgggggccgggagtttgcggattttgaatat
aggaaaaccacagcttttggaccctaa

>gi568815579f:34072643_34321738|GENSCAN_predicted_peptide_4|96_aa
MRQLAPQGRKSAFLGSLAPPGRPPSLRGLPGAGPGASATSRAPANRGSVPFPRLTGADPP
LRCRGRRVSDAPPGLNPLGEDIDNVDEWMLLGLKFL

>gi568815579f:34072643_34321738|GENSCAN_predicted_CDS_4|291_bp
atgcgccagctggctccgcagggccggaaaagcgcgttcctcggcagcctggcgccgccg
ggaaggccgccctccctccgcgggcttccgggagcgggtcctggcgccagcgcgacctcc
cgggccccggcgaaccgagggagcgtcccctttccccgcctgacgggcgccgacccgccc
ctgcggtgccgcggccgccgagtctccgacgcgcccccaggactcaaccccctgggtgaa
gacattgacaatgtggatgaatggatgcttttagggttgaagtttctctag

>gi568815579f:34072643_34321738|GENSCAN_predicted_peptide_5|112_aa
MHFAKKHKKGLKKMQANNAKAMSARAEAIKALVKPKEVKPKIPKGVSHKLDRLAYIAHPK
LGKCARARTAKGLRLCRLKAKAKDQISAQTAAPASVPAQAPKGAQAPTKASE

>gi568815579f:34072643_34321738|GENSCAN_predicted_CDS_5|339_bp
atgcactttgccaagaagcacaagaagggcctcaagaagatgcaggccaacaatgccaag
gccatgagtgcacgtgccgaggctatcaaggccctcgtaaagcccaaggaggttaagccc
aagatcccaaagggtgtcagccacaagctcgatcgacttgcctacattgcccaccccaag
cttgggaagtgtgctcgtgcccgcactgccaagggactcaggctgtgccggctaaaggcc
aaggccaaggatcaaatcagcgcccagactgcagctccagcttcagttccagctcaagct
cccaaaggtgcccaggcccctacaaaggcttcagagtag

>gi568815579f:34072643_34321738|GENSCAN_predicted_peptide_6|241_aa
MDYKRRFLLGGSKQKVQQHQQYPMPELGRALSAPLASTATTAPLGSLTAAGSCHHAMPHT
TPIADIQQGISKYLDALNVFCRASTFLTDLFSTVFRNSHYSKAATQLKDVQEHVMEAASR
LTSAIKPEIAKMLMELSAGAANFTDQKEFSLQDIEVEYLLCHTCVGKYTTKVLGRCFLTV
VQVHFQFLTHALQKVQPVAHSCFAEVIVPEKKNSGSGGGLSGMGHTPEVEEAVRSWRGAA
E

>gi568815579f:34072643_34321738|GENSCAN_predicted_CDS_6|723_bp
atggactacaagcggcgcttcctgcttggcgggtccaagcagaaggtgcagcagcaccag
caatacccgatgcctgagctgggccgagcactgagtgctcccctggcatccacggccacc
actgcccccctgggcagtctgaccgctgcaggcagctgccaccatgccatgccccacact
actcctatcgccgacatccagcagggcatctccaagtatctggatgccctgaacgtcttc
tgccgtgccagtactttcctcacagatctcttcagcactgtgttcaggaactctcactac
tcaaaggcagccacacagctcaaagatgtgcaggagcatgtcatggaagcagccagtcgg
ctgacctcggccataaagcctgagatcgccaagatgctaatggaacttagtgctggggct
gcaaattttacggatcagaaggaattcagtctccaggacattgaggtagagtatcttttg
tgtcatacttgtgtaggaaaatatactacaaaggtgttggggcgatgtttcctgactgtg
gtgcaagtccatttccagtttttgactcatgcgttacagaaggtccagccggtggctcac
tcttgctttgctgaggtcatcgtgccagaaaaaaagaacagcggcagtggcggcggctta
tctggcatgggccacacacctgaagtagaggaagctgtgcggtcctggcggggggctgct
gag