GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:15:18

Sequence gi568815586r:122373500_122582088 : 208589 bp : 43.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   4461   3890  572  1  2   76   97   427 0.012  34.88
 1.01 Init -   6953   6869   85  2  1   50   50    82 0.577   1.58
 1.00 Prom -  56174  56135   40                              -4.06

 2.10 PlyA -  56971  56966    6                               1.05
 2.09 Term - 100776  99998  779  1  2   73   39   557 0.943  42.83
 2.08 Intr - 104459 104342  118  2  1   71   96   122 0.998  11.34
 2.07 Intr - 104793 104707   87  0  0   90   41    69 0.853   2.57
 2.06 Intr - 106812 106691  122  1  2   52  105    22 0.986   0.51
 2.05 Intr - 108165 108023  143  2  2   73   75    84 0.988   5.60
 2.04 Intr - 108588 108446  143  0  2    8   47   134 0.953   0.45
 2.03 Intr - 115964 115887   78  2  0   58   84   107 0.981   7.05
 2.02 Intr - 117068 116963  106  1  1  111   68    60 0.995   6.52
 2.01 Init - 127341 127109  233  0  2   95   41   504 0.967  44.13
 2.00 Prom - 131779 131740   40                              -3.36

 3.07 PlyA - 131834 131829    6                              -1.95
 3.06 Term - 132207 132028  180  0  0   58   48   155 0.979   6.11
 3.05 Intr - 133424 133335   90  2  0   62  113    22 0.830   2.29
 3.04 Intr - 134951 134719  233  0  2   49   98   133 0.366   7.89
 3.03 Intr - 137689 137610   80  0  2   71   91    51 0.775   2.89
 3.02 Intr - 145530 145340  191  0  2   40  115   122 0.521   8.48
 3.01 Init - 153243 153184   60  0  0   95   72    62 0.772   4.61
 3.00 Prom - 154193 154154   40                              -7.46

 4.00 Prom + 155334 155373   40                              -4.36
 4.01 Init + 156565 156693  129  0  0   70   67    98 0.962   6.05
 4.02 Intr + 166177 166255   79  0  1   31  115   130 0.956   9.12
 4.03 Intr + 170101 170135   35  2  2   75  116    30 0.971   2.44
 4.04 Intr + 172677 172770   94  2  1   83   93    32 0.799   2.74
 4.05 Intr + 178061 178197  137  0  2   57   74    44 0.407   0.19
 4.06 Intr + 183885 184010  126  2  0   70   91   117 0.992  11.08
 4.07 Intr + 184101 184190   90  2  0   57   73   126 0.866   8.19
 4.08 Intr + 188422 188475   54  0  0   74   76    37 0.489   0.28
 4.09 Intr + 196182 196325  144  2  0   71  109    46 0.918   5.48
 4.10 Intr + 199438 199557  120  0  0   63   98    39 0.892   3.09
 4.11 Intr + 199643 199786  144  1  0   71   78    85 0.987   6.28
 4.12 Intr + 200783 200881   99  1  0   99  105    23 0.977   5.41
 4.13 Intr + 202044 202147  104  2  2   65   71   147 0.735   9.67
 4.14 Intr + 202301 202400  100  2  1   41  115    21 0.599   0.21
 4.15 Intr + 203396 203534  139  1  1   58   78    72 0.203   3.24
 4.16 Term + 206406 206455   50  1  2   77   44    55 0.124  -2.53
 4.17 PlyA + 206813 206818    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:122373500_122582088|GENSCAN_predicted_peptide_1|219_aa
MSMLKPSGLKAPTKILKPGSTALKTPTAVVAPVEKTISSEKASSTPSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLTRKVQAEDEANGLQTTPASRATSPLCTSTASMVSSSPSTPSNIPQKPSQPAAKEPS
ATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVL

>gi568815586r:122373500_122582088|GENSCAN_predicted_CDS_1|657_bp
atgagtatgctaaagccaagtgggcttaaggcccccaccaagatcctgaagcctggaagc
acagctctgaagacacctacggctgttgtagctccagtagaaaaaaccatatccagtgaa
aaagcatcaagcactccatcatctgagactcaggaggaatttgtggatgactttcgagtt
ggggagcgagtttgggtgaatggaaataagcctggatttatccagtttcttggagaaacc
cagtttgcaccaggccagtgggctggaattgttttagatgaacccataggcaagaacgat
ggttcggtggcaggagttcggtatttccagtgtgaacctttaaagggcatatttacccga
ccttcaaagttaacaaggaaggtgcaagcagaagatgaagctaatggcctgcagacaacg
cccgcctcccgagctacttcaccgctgtgcacttctacggccagcatggtgtcttcctcc
ccctccaccccttcaaacatccctcagaaaccatcacagccagcagcaaaggaaccttca
gctacgcctccgatcagcaaccttacaaaaactgccagtgaatctatctccaacctttca
gaggctggctcaatcaagaaaggagaaagagagctcaaaatcggagacagagtattg

>gi568815586r:122373500_122582088|GENSCAN_predicted_peptide_2|602_aa
MAAEVYFGDLELFEPFDHPEESIPKPVHTRFKDDDGDEEDENGVGDAELRERLRQCEETI
EQLRAENILSSRWALSPGQYHQEIEEFVSNLVKRFEEQQKNDVEKTSFNLLPQPSSIVLE
EDHKVEESCAIKNNKEAFSPRNAARISEKRKEYMDACGEANNQNFQQRYHAEEVEERFGR
FKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAELENSGLALYDGKDGTDGE
TEVGEIQQNKSVTYDLSKLVNYPGFNISTPRGIPDEWRIFGSIPMQACQQKDVFANYLTS
NFQAPGVKSGNKRSSSHSSPGSPKKQKNESNSAGSPADMELDSDMEVPHGSQSSESFQFQ
PPLPPDTPPLPRGTPPPVFTPPLPKGTPPLTPSDSPQTRTASGAVDEDALTLEELEEQQR
RIWAALEQAESVNSDSDVPVDTPLTGNSVASSPCPNELDLPVPEGKTSEKQTLDEPEVPE
IFTKKSEAGHASSPDSEVTSLCQKEKAELAPVNTEGALLDNGSVVPNCDISNGGSQKLFP
ADTSPSTATKIHSPIPDMSKFATGITPFEFENMAESTGMYLRIRSLLKNSPRNQQKNKKA
SE

>gi568815586r:122373500_122582088|GENSCAN_predicted_CDS_2|1809_bp
atggccgcagaggtgtattttggcgatctagagctcttcgagccgttcgaccacccagag
gagtcgattccgaagcccgttcacactcgcttcaaggacgacgacggcgacgaggaggac
gaaaatggggtcggcgacgcggagctacgggagcggcttcggcagtgcgaggagaccatc
gagcagctccgcgccgagaatatcctttcctctcgctgggccctgtcacccgggcaatat
catcaagaaatagaggaatttgtatcaaatttagtaaaaagatttgaggaacagcagaaa
aatgatgtggaaaagacttcctttaatcttttgccccagccatccagtattgtgctagag
gaggaccacaaagtggaagagtcctgtgccattaaaaacaacaaggaagctttcagtcct
cggaatgctgctcgaataagtgaaaagagaaaagagtatatggatgcctgtggagaagca
aacaatcagaatttccagcagcgataccacgcagaagaagtagaagaaagatttggaaga
ttcaagccaggagttattagtgaggaacttcaagatgcactaggtgtgacagacaagagt
cttccaccttttatctatcggatgcgccagctagggtacccaccagggtggctcaaagag
gctgaattggagaattcggggcttgcactctatgatggaaaagatggcactgatggggaa
acagaagttggagaaatacaacagaataaaagtgtcacttacgatctctcaaaattggtc
aactatcctggttttaatatatctactcccagaggaattccagacgaatggaggatcttt
ggttccataccaatgcaggcatgtcagcagaaggatgtgtttgccaattaccttacttct
aacttccaagcgccaggtgtgaagtctggcaacaagaggtcttcatctcactctagccca
ggtagtccaaagaagcagaagaatgaaagcaactcagcgggatctcccgccgacatggag
ctcgattcagatatggaggtaccacatggttctcagagcagcgaaagttttcagtttcaa
ccaccattacctcctgacactcctccactcccccggggaactcctccacccgtcttcacc
cctccactcccaaagggcaccccgccgctgactcccagtgactcaccccagaccagaaca
gcatctggagctgtggatgaggacgcactgactctagaagaacttgaagaacagcagagg
cggatctgggcagctcttgagcaggccgagagcgtaaacagcgactccgacgttcctgtg
gacacacctttaactggcaattccgttgcctcatcaccttgtccaaatgagctagacctc
cctgtcccggagggaaaaacatctgaaaagcagacgctggatgagcctgaggtaccagag
atttttacaaagaaatcagaagctggacatgcctccagtccagactctgaggtgacatca
ctttgtcagaaggaaaaagcagagttggctccggtaaacactgaaggtgcccttcttgat
aatggcagtgtcgtaccaaactgtgacatcagcaatgggggcagccagaagctctttcct
gcagacaccagtccttcaacggccactaaaattcatagccctatacctgacatgagcaaa
tttgcaactggaatcacgccatttgaatttgagaatatggcagaatctactggaatgtac
ctcaggataagaagcttgttaaagaactcaccccgaaaccagcagaaaaacaaaaaggcc
tctgaataa

>gi568815586r:122373500_122582088|GENSCAN_predicted_peptide_3|277_aa
MAPRPSSAPAIMAACCREGEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGE
DRHKRKERKSSRGRSHSRSRSRERLERAKKLQEQREKEMVEKQKQQEIAAAAAATGGSVL
NVAALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKM
LWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDEAGCSSVDEESYKTLKQQE
EVFRNLDAQYEMARSQTHTQRGMGLGFTSSMRGMDAV

>gi568815586r:122373500_122582088|GENSCAN_predicted_CDS_3|834_bp
atggcgccgcggccttcttctgcgcccgccatcatggctgcctgctgtagggagggggaa
ggaagaagacatgaatccaaagataaatcctctaagaaacataagtctgaggaacataat
gacaaagaacattcttctgataaaggaagagagcgactaaattcatctgaaaatggtgag
gacaggcacaaacgcaaagaaagaaagtcatcaagaggcagaagtcactcaagatctagg
tctcgtgaaaggttggaaagggcaaagaaattacaagaacagcgagaaaaggaaatggtt
gaaaaacaaaaacaacaagaaatagctgcagcagctgcagctactggaggttctgttctc
aatgttgctgccctgttggcatcaggaacacaagtaacacctcagatagccatggcagct
cagatggcagccctgcaagctaaagctttggcagagacaggaatagctgttcctagctac
tataacccagccgctgttaatccaatgaaatttgctgaacaagagaaaaaaaggaaaatg
ctttggcagggcaagaaagaaggggacaaatcccaatctgctgaaatatgggaaaaattg
aattttggaaacaaggaccaaaatgtcaaatttaggaaattgatgggtattaagagtgaa
gatgaagctggatgtagctcagttgatgaagaaagttacaagactctgaagcagcaggaa
gaagtatttcgaaatttagatgctcagtatgaaatggcaagatcacaaacccacacacaa
agaggaatgggtttgggtttcacatcttcaatgcgaggaatggatgcagtttga

>gi568815586r:122373500_122582088|GENSCAN_predicted_peptide_4|547_aa
MWNDIELLTNDDTGSGYLSVGSRKEHGTALYQVDLLVKISSEKAFVQKANDENRRTYQNL
VIEKDGSNEAIENVDFSTAKKGTGNCAFSKWEPDSSKKGMTVKNLIDAEIIKVNNLNSLN
NKHLTKFLFQLNRLSRLLHKHRFAEAESFAIQFGLDVELVYKVKSNHILEKLALSSVDAS
EQTEWQQLVDDAKENLHKIQDDEFVVNYCLKAQWITYETTQEMLNYAKTRLLKKEDKTAL
IYSDGLKEANFESRFDVKMLESLLNSMSASVSLQKLCPWFKNDVIPFVRRTVPEGQKDYQ
NTEEVCQLRTLVNNLRELITLHRKYNCKLALSDFEKENTTTIVFRMFDKVLAPELIPSIL
EKFIRVYMREHDLQEEELLLLYIEDLLNRCSSKSTSLFETAWEAKAMAVIACLSDTDLIF
DAVLKIMYAAVVPWSAAVEQLVKQHLEMDHPKVKLLQESYKLMEMKKLLRGYGIREVNLL
NKEIMRVVRYILKQDVPSSLEDALKVAQAFMLSDDEIYSLRIIDLIDREQVWQGLENVCS
EDIRGHS

>gi568815586r:122373500_122582088|GENSCAN_predicted_CDS_4|1644_bp
atgtggaatgatattgagctgctaacaaatgatgataccggaagtgggtacctgagtgtc
ggttcaagaaaagaacatggaactgctttatatcaagtagatttgctagtgaagatctct
tctgaaaaggcatttgttcagaaagctaacgatgaaaatcggcggacttaccagaatctt
gtcattgagaaggatggttcaaatgaagcaattgagaatgtagacttcagtacagcaaaa
aagggaaccggtaattgtgcattctcaaaatgggaaccagattcttccaagaaaggaatg
acagttaagaaccttattgatgcagagattattaaagtgaataacttaaattccctgaat
aataagcatttaacaaaatttctcttccaacttaacagattgagtcggttacttcacaaa
cacagatttgctgaagctgagagttttgccattcagtttggactagatgttgagcttgtt
tacaaggtcaagtcaaatcatatattggagaaactggcattgagttctgtggatgccagt
gaacagaccgaatggcaacaacttgtagacgacgctaaggaaaatctacataagatccag
gatgatgaatttgtggtgaattactgcctgaaagctcagtggataacctatgaaaccact
caagagatgctgaattatgccaaaaccaggcttttgaagaaagaagataaaactgctctc
atttattctgatggcttgaaagaggcaaactttgaaagcagatttgatgtgaaaatgctg
gagagcttgctcaactcaatgtctgcatcagtctctttgcaaaagctgtgtccatggttt
aaaaatgatgtgattccatttgtaagaaggactgtgcctgaaggacagaaagattatcag
aacacagaggaagtatgtcagctaaggactttggtaaataacttgcgagagttgatcacg
ttgcataggaagtacaactgcaaattagccctctctgattttgagaaggaaaatacaacc
accatagtgttccgaatgtttgataaagtgctggccccagagcttattccctccatctta
gagaagtttataagagtttacatgagagaacatgacttgcaagaggaggaacttctcttg
ctgtacatagaggatttactgaatagatgcagctcaaagtccacatcactctttgaaaca
gcatgggaagcaaaggccatggcagtaatagcgtgtttatctgacacggacctcatattt
gatgccgtgctcaagatcatgtatgcggcagtggttccttggagtgcagctgtggagcaa
ctggtgaaacagcacctggaaatggaccatcccaaagtcaagttattacaggaaagttac
aaactaatggagatgaaaaaacttttacgaggctatggaataagagaggtaaatctctta
aacaaggaaataatgagagtggttagatacattctcaaacaagatgtcccatcttcttta
gaagatgctttaaaggtagcccaagcgtttatgttatctgatgatgagatctacagtcta
agaattattgacctgattgatagagaacaggtttggcaaggcctggagaatgtctgtagc
gaagacatccgtggacattcttaa