GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:11:05

Sequence gi568815593r:147294038_147553587 : 259550 bp : 39.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1990   2071   82  1  1  128   71    41 0.197   5.12
 1.02 Intr +   4960   5036   77  0  2   64   61    70 0.051  -0.71
 1.03 Intr +  29861  30065  205  2  1   79   44   273 0.045  20.28
 1.04 Intr +  32238  32303   66  2  0   59   86    54 0.036   0.48
 1.05 Term +  33787  34017  231  0  0   22   32   176 0.121   0.89
 1.06 PlyA +  34610  34615    6                               1.05

 2.00 Prom +  35115  35154   40                              -7.45
 2.01 Init +  37668  37765   98  2  2   55   72   122 0.873   7.13
 2.02 Intr +  48969  49006   38  0  2  101  115    30 0.486   3.99
 2.03 Intr +  57028  57117   90  2  0  137   47    91 0.930   8.95
 2.04 Intr +  67480  67577   98  2  2   63   51    88 0.334   1.41
 2.05 Intr +  76617  76733  117  2  0   64  116   104 0.913  10.54
 2.06 Intr +  79132  79257  126  0  0   63   82    84 0.967   5.26
 2.07 Intr +  79720  79816   97  0  1  109   99    17 0.262   3.56
 2.08 Intr +  97282  97423  142  2  1   82   31   204 0.753  12.59
 2.09 Term +  97764  98052  289  0  1   59   38   155 0.647   1.46
 2.10 PlyA +  98911  98916    6                               1.05

 3.17 PlyA -  99354  99349    6                              -1.95
 3.16 Term - 100086  99998   89  1  2   33   47    98 0.418  -2.96
 3.15 Intr - 101684 101522  163  2  1   95  109   155 0.795  16.93
 3.14 Intr - 102656 102369  288  2  0   16   67   162 0.910   3.42
 3.13 Intr - 103808 103629  180  2  0   83   93   181 0.985  17.24
 3.12 Intr - 105215 105045  171  2  0   28   56   253 0.602  15.32
 3.11 Intr - 106796 106655  142  1  1   64   79   162 0.928  12.33
 3.10 Intr - 107659 107503  157  2  1  127   77   114 0.999  12.35
 3.09 Intr - 111764 111573  192  0  0   53   55    89 0.209   0.64
 3.08 Intr - 114759 114691   69  1  0   79  107    23 0.271   1.54
 3.07 Intr - 118651 118210  442  1  1   52   75   223 0.268   9.50
 3.06 Intr - 119620 119559   62  2  2  124   77    13 0.401   1.33
 3.05 Intr - 121836 121672  165  1  0   59  105   178 0.998  15.61
 3.04 Intr - 124594 124410  185  0  2   68   89   237 0.975  20.31
 3.03 Intr - 130926 130838   89  0  2  124   53    62 0.316   4.15
 3.02 Intr - 133189 133095   95  2  2   39   60    75 0.196  -1.44
 3.01 Init - 135264 135192   73  0  1   45   82    42 0.153  -0.83
 3.00 Prom - 135891 135852   40                              -7.05

 4.00 Prom + 137478 137517   40                              -3.85
 4.01 Init + 139246 139350  105  0  0   88  106    28 0.470   3.69
 4.02 Intr + 149994 150031   38  2  2   93  100    52 0.047   3.04
 4.03 Intr + 152067 152230  164  0  2  130   38    62 0.279   4.10
 4.04 Intr + 158178 158300  123  1  0   34  103   111 0.430   6.84
 4.05 Term + 170216 170334  119  0  2   52   39   123 0.137   1.52
 4.06 PlyA + 171164 171169    6                               1.05

 5.00 Prom + 188595 188634   40                              -4.45
 5.01 Init + 201773 202716  944  1  2   86   53   194 0.370   8.86
 5.02 Intr + 210165 210399  235  0  1  -29  115   124 0.167   0.17
 5.03 Term + 210669 210776  108  2  0   77   44    73 0.571  -0.67
 5.04 PlyA + 210789 210794    6                               1.05

 6.03 PlyA - 211518 211513    6                               1.05
 6.02 Term - 214550 214464   87  2  0   83   38    69 0.767  -1.92
 6.01 Init - 215821 215441  381  1  0   96  116   347 0.988  35.22
 6.00 Prom - 221032 220993   40                              -4.95

 7.03 PlyA - 221242 221237    6                               1.05
 7.02 Term - 221642 221501  142  1  1   94   36   110 0.049   2.82
 7.01 Init - 244578 244535   44  0  2   78   77    72 0.344   5.04
 7.00 Prom - 256145 256106   40                              -3.15


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_1|220_aa
XCTEAETLTNGDFLYQCKFQYSQLNASKESSPDPYPKRGFLDLTQERIQGKFAEYSFQDE
EDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRSVKSKEMA
MNLLLSARSQKGLFVLKCLLTMVKMLSMAAALRGARDTYAWPPASGTHRRKWYMWNGQTE
NSLKLEAKLCEKDKYFREDSVESQNKFHESSYRKQPKTRS

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_1|663_bp
nngtgcacagaggcagaaacccttacaaatggagatttcctttatcaatgtaaatttcaa
tatagccagctaaatgccagcaaggaaagcagtcctgatccataccccaagagagggttc
ttggatctcacgcaagaaagaattcagggcaagtttgcagagtattccttccaagatgag
gaagacatgttcatggtggtggacctcctgctgggtggagacctgcgttatcacctgcaa
cagaacgtccacttcaaggaagaaacagtgaagctcttcatctgtgagctggtcatggcc
ctggactacctgcagaaccagcgcatcattcacaggtcagtcaagtccaaggagatggcc
atgaacttattacttagtgcccgttctcagaagggcctttttgtactgaaatgtctcctc
accatggtaaagatgctcagcatggctgcagctctgaggggagcacgggacacctatgca
tggccacctgcctcaggcacccacagacgaaagtggtacatgtggaacggacagacagag
aacagcctaaaattggaagctaaattgtgtgagaaagacaagtacttcagagaagatagt
gtggagtcgcaaaataagtttcatgagagctcatacagaaaacagcctaaaactagaagc
taa

>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_2|364_aa
MTGVLMKRGTLDTEEHTKSEDDVDVERHREDDRDMKPDNILLDEHGHVHITDFNIAAMLP
RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK
EIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQK
RLIPGFIPNGFIFVRTDNQRHIIPIGWIAKPMDFCGLLHYAENLEVQEIALLRVTDLTIS
QTPFPLPKPVALRENRDGLPSGFRGNMRRAFGGCSQSKEILCRIKGSGGMVHFGSPKGSA
DDRFGHGRLIFMAQRGCAEMSQTQGLSNSRAESAEVDAQKRVYVCLFLYLLAVAGTATYP
KVTA

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_2|1095_bp
atgactggtgtccttatgaaaagaggaactttggacacagaggaacatacaaagagtgaa
gatgatgtggatgtagagagacacagggaggatgacagggatatgaagcctgacaatatt
ttacttgacgaacatgggcacgtgcacatcacagatttcaacattgctgcgatgctgccc
agggagacacagattaccaccatggctggcaccaagccttacatggcacctgagatgttc
agctccagaaaaggagcaggctattcctttgctgttgactggtggtccctgggagtgacg
gcatatgaactgctgagaggccggagaccgtatcatattcgctccagtacttccagcaag
gaaattgtacacacgtttgagacgactgttgtaacttacccttctgcctggtcacaggaa
atggtgtcacttcttaaaaagctactcgaacctaatccagaccaacgattttctcagtta
tctgatgtccagaacttcccgtatatgaatgatataaactgggatgcagtttttcagaag
aggctcattccaggtttcattcctaatggatttatatttgtaaggactgataaccaaaga
catataattcccattggatggatagccaaaccaatggacttctgtggtctactgcattat
gctgaaaacttagaagtacaagaaatagctctactacgggtaactgatttaacaatttcc
caaacaccctttccactacccaagcccgtggccctcagagagaaccgggatggattgcca
tctgggttcagaggcaatatgaggagggcatttgggggttgttcccagagcaaggaaatc
ttgtgcagaatcaaaggttctggtggaatggttcacttcggaagtcccaagggcagtgcg
gatgaccgatttggccatggaagacttatcttcatggcacagagaggttgtgcagagatg
agtcagactcaggggctgagtaacagcagagcagagagtgcagaagtggacgctcagaag
cgagtttatgtgtgtcttttcctctatctgctggctgtggctggtactgcaacctatccc
aaagtaacagcctag

>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_3|853_aa
MPRTLLGCKTVTHVALGSCAGPKAVGAGEICWKVRSHIVEEKPFGALTKEMTARCQSDRL
LIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHFQ
MPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCCDYAL
HVDITHWNDSVKQEVQNLIKDKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQV
HAENGDIIAQVTPCSSLERALGLHSIFFFISSVLLELSICARHHHKYLAKDRTCSKVPHN
LGGRNRGECRQAMKLEDEVKQKEGWPLLENQKRHPGRGGFQIGTFNGRAFADSLLKMCQS
YKTFSVIKKDRANPHVGNGDNWPRRPCTEQARRVRGGGSHQFERFMFLLTPGDFFLQLEA
EAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSK
NWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPE
GTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRISVGSDSDLVIWD
PDAVKIVSAKNHQSAAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGAGRFIPCSP
FSDYVYKRIKARRKGSVDDVEFLVLGSTDTVITSLESLASAHLMGSASVLAFESLTGKEA
LTGLLVMIHPARSGSSGSASSLPPLWPKLRNGWRLCAAAMGGLAVFVQLTMADLHAVPRG
MYDGPVFDLTTTPKGGTPAGSARGSPTRPNPPVRNLHQSGFSLSGTQVDEGVRSASKRIV
APPGGRSNITSLS

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_3|2562_bp
atgcctagaaccctgctgggctgcaagacagtgacacacgtagctcttggtagctgtgca
gggcctaaggcagtgggagcaggtgaaatttgctggaaggtcaggtcacacatcgtggag
gaaaagccctttggagccttgacaaaggagatgactgctagatgccagagtgaccgtctc
cttatcaagggaggcagaatcgtcaatgatgatcagtccttttatgctgatatttacatg
gaagatggcttaataaaacaaattggagacaatctgattgttcctggaggagtgaagacc
attgaagccaatgggaagatggtgatccctggaggcatcgatgtccatactcacttccag
atgccatataagggaatgaccacagtagatgacttcttccaagggacaaaggcggcctta
gcaggtggcaccaccatgatcattgaccatgtggtgcctgagcctgagtccagcctgact
gaggcctatgagaaatggagagagtgggctgatgggaagagttgctgtgactatgccctg
catgtggacatcacccactggaatgacagcgtcaagcaggaagtgcagaacctcatcaag
gacaaaggggttaactccttcatggtttatatggcttataaggatttgtatcaagtatct
aacacagagctctatgagatcttcacctgcctgggagagctgggggccattgctcaagtt
catgctgagaatggggatatcattgcccaggtaacaccgtgcagctccctggagcgtgct
ttgggtctgcattccattttcttcttcatttcttcagtgctgcttgagctctcaatatgt
gcaaggcaccatcataagtaccttgctaaagacagaacctgctccaaggtacctcacaat
ttaggtggaagaaacagaggggaatgtagacaagcaatgaaactagaagatgaggtaaaa
cagaaagagggctggccattgttggagaatcagaaaaggcatcctggaagaggaggattt
caaattggaacatttaatgggagagcatttgctgattctcttctgaaaatgtgtcaaagc
tacaagacattctctgtcataaagaaagaccgagcaaacccgcatgttggaaatggggat
aactggcccagaaggccatgtactgagcaggccagaagagttcgtggaggtgggagccac
cagtttgagaggttcatgtttctattgactcctggagactttttcttgcagctggaagct
gaggctgtgttccgtgccatcaccattgccagccaaaccaattgccctctctacgtcaca
aaggtcatgagcaagagtgcagctgacctcatctcacaagccaggaaaaaaggaaatgta
gtctttggtgagcccatcactgccagcctcggcatagatggaacccattattggagcaag
aactgggccaaggcggctgcatttgtgacatccccacccctgagccctgacccaactact
ccggactacatcaactccttgctggccagcggggatctgcagctatctgggagtgcccac
tgcaccttcagcactgcccagaaagcaattgggaaggacaacttcacagccattcctgag
ggcaccaatggtgtggaggagcggatgtctgtcatctgggacaaggctgtggccacaggg
aaaatggacgaaaaccagttcgtggctgtgacaagcacaaacgctgccaagatcttcaac
ctgtatccccgcaagggaagaatatctgtgggttctgacagcgacctcgtcatctgggat
ccagatgctgtgaagatcgtctctgccaagaaccaccagtctgcggcagagtacaacatc
tttgaagggatggagctgcgcggggctcctctggttgtcatctgccagggcaagatcatg
ctggaagatggcaacctgcacgtgacccagggggctggccgcttcataccctgcagcccg
ttctccgactatgtctacaagcgcattaaagcacggaggaagggaagtgttgatgatgta
gagttcttggttttggggagtacagatacagtcatcacatcactagaatcattagcatct
gcacatttgatgggctcggcttctgtgctggcatttgagtcactaacagggaaggaggct
ctgacaggacttcttgtgatgatccatcctgcacggtcaggctcctctggcagcgcgtcc
tcattgcctcccctctggccaaagttaagaaatgggtggaggttgtgtgccgctgccatg
ggtggtcttgcagtgtttgtccagttgactatggcagacctgcatgccgtcccaaggggc
atgtacgatgggcctgtgtttgacctgaccaccacccccaaaggtggcacccccgcaggc
tctgctcggggctctcctactcggccgaacccacctgtgaggaatcttcatcagtcggga
tttagcctgtcaggcacccaagtggatgagggggttcgctcagccagcaagcgcatcgtg
gcgcccccaggcggccgttctaatatcacatctctgagttaa

>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_4|182_aa
MLWVRSLGGWGKRQGGVGSGVGTKMPYQKTGNQIWETGAEKDLPLDLKKALELLSVNLEQ
SEEGLAHRVICTGRDLKDHLVQCPHFTDAESERDNKGLPKVTKGKVLHLNRKRTGCSKPK
GTSANRLMPTTKPGGPCKSTTVAGRIHECKNQGEEAGVIPFTFTPRDPTRNTRFPLLRFW
VI

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_4|549_bp
atgctctgggtccgaagcttgggtggatggggaaagaggcagggtggggtagggtcaggt
gtaggaacaaagatgccttatcagaaaacaggaaaccagatatgggaaacaggtgcagag
aaggacttacccctggacttgaagaaggccttagaactcctctctgtgaatttggaacaa
agtgaggaggggctggctcacagggtcatttgcactggcagggacctcaaggatcatctg
gttcaatgccctcattttactgatgcagaatctgagagggataataagggtttgcccaaa
gtgacaaaggggaaggttctgcatctcaatcgcaaacgcacaggatgttccaagcctaag
ggaacaagtgcaaacagactcatgcccacaacaaaacctggcggaccctgcaaatcaact
actgtggcaggaagaatacatgaatgcaagaaccaaggggaagaagcaggagtgatccct
tttaccttcactcccagggacccaactcgaaatacacgctttccacttctgcggttctgg
gttatttag

>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_5|428_aa
MAILPKVIYRFNGILIKLSMTFFTELEKTTFKFIWNQKRARIAKSIRRQKNKAGGIMLPD
FKLYYKATVTKIAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTSYTKINSRWIKDLHVRPKTIKALEENLHNTIQDIRMGKDF
MSKTPKAMATKDKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIY
NELKQIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSSSLAIRKMQIKTTMRYHL
TPVRMAIIKKSGNNRDSVLAALNITYKSCQQNPVSRDHYFEGTLPIAALLRRRIFYVPQM
PTVKLNQSSERSQTLPSLGKETYSQIQVWPEGQIVPSAPRALANFMKETSCTKEAHMGRR
KLEMTQDS

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_5|1287_bp
atggccatactgcccaaggtaatttatagattcaatggcatcctcatcaagctatcaatg
actttcttcacagaattggaaaaaactactttcaagttcatatggaaccaaaaaagagcc
cgcattgccaagtcaatccgaagacaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaatagcatggtactggtaccaaaacaga
gatatagaccaatggaacagaacagagccctcagaaataatgccacatatctacaactat
ctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
tcttatacaaaaattaattcaagatggattaaagacttacatgttagacctaaaaccata
aaagccctagaagaaaacctacacaataccattcaggacatacgcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagacaaaatagacaaatgggatctaatt
aaactaaagagcttctgcactgcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaag
gatatgaacagacatttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcatcatcactggccatcagaaaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcgatcattaaaaagtcaggaaacaacagagacagtgttctggct
gccttaaacattacttacaagagctgtcagcaaaaccctgtctccagggaccattacttt
gagggaactctgccaatcgcagcattattgagaaggcgtattttttatgttcctcaaatg
cctactgtcaaactaaaccaaagttctgaaaggtcacaaacacttccaagtttggggaag
gaaacctactcccagattcaagtgtggcctgaaggccagattgttccctctgcacccaga
gcccttgccaacttcatgaaggaaacatcttgcacaaaagaggcccacatgggaagaagg
aaactagaaatgacccaagactcctga

>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_6|155_aa
MASGRRGWDSSHEDDLPVYLARPGTTDQVPRQKYGGMFCNVEGAFESKTLDFDALSVGQR
GAKTPRSGQGSDRGSGSRPGIEGDTPRRGQGREESREPAPASPAPAGVEIRSATGKEVLQ
NLGPKDKRLRDVVQKMQGLAGLETSEFKLKLSVGE

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_6|468_bp
atggcctcgggccggaggggctgggacagctcccacgaagacgatctgcccgtgtacctg
gccaggccgggcaccacggaccaggtcccgcggcagaaatacggcggcatgttctgcaac
gtggagggcgccttcgagagcaagacgctggatttcgatgccctcagcgtggggcagcgg
ggcgcgaagactcctcggagcggccagggcagcgaccgaggatcggggagtcggcccggg
atcgagggggacaccccgcgcaggggccaaggccgggaagagagcagggagcccgcgccc
gcctcccccgcccccgccggggtagagatccggagcgccaccggcaaagaggtgttgcag
aacctcggccccaaggacaagagactcagagatgtagttcagaaaatgcagggcctggca
gggctggagacttcagagttcaaactgaagctttcagttggggaataa

>gi568815593r:147294038_147553587|GENSCAN_predicted_peptide_7|61_aa
MEVIDDMIEAASMEWAKENSVFGTGFRTFENVKIKERCSVCKIGKETPTTPHQEGDYVMS
Y

>gi568815593r:147294038_147553587|GENSCAN_predicted_CDS_7|186_bp
atggaggtcattgatgacatgatcgaagcagcttcaatggagtgggccaaagaaaattct
gtttttggaactggctttcgaacatttgagaatgttaaaatcaaagagagatgctcagtg
tgtaaaattgggaaggaaaccccaacaactccccaccaggaaggtgattatgtcatgtcc
tattaa