GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:56:56

Sequence gi568815589f:126779400_126980911 : 201512 bp : 45.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -    781    680  102  2  0   93   77    47 0.007   4.25
 1.02 Intr -  25673  25573  101  1  2   56   57   108 0.019   4.25
 1.01 Init -  46188  46058  131  0  2   53   37   178 0.320   8.82
 1.00 Prom -  47387  47348   40                              -3.86

 2.00 Prom +  50557  50596   40                              -5.76
 2.01 Sngl +  53111  54514 1404  1  0   65   42  1427 0.939 131.81
 2.02 PlyA +  54549  54554    6                               1.05

 3.00 Prom +  66045  66084   40                              -6.16
 3.01 Init +  66986  67117  132  1  0   78  100    13 0.111   1.64
 3.02 Intr +  76001  76111  111  1  0   54   96    79 0.305   5.88
 3.03 Intr +  80991  81340  350  2  2   78   94    83 0.175   2.05
 3.04 Intr +  88953  89004   52  0  1   78   62    32 0.107  -1.49
 3.05 Intr +  97764  97831   68  2  2  102  100    12 0.060   1.50
 3.06 Term +  99991 101515 1525  1  1  103   44  1505 0.207 137.58
 3.07 PlyA + 101977 101982    6                               1.05

 4.03 PlyA - 102031 102026    6                               1.05
 4.02 Term - 103270 103190   81  1  0  123   44    31 0.143  -0.11
 4.01 Init - 107716 107642   75  1  0   65   32   129 0.283   6.09
 4.00 Prom - 113957 113918   40                              -4.36

 5.00 Prom + 118743 118782   40                              -1.86
 5.01 Init + 135156 135346  191  2  2   57   15   259 0.717  11.98
 5.02 Intr + 135453 135613  161  0  2   60   81   119 0.712   8.03
 5.03 Term + 171606 172327  722  1  2   51   42   415 0.892  26.85
 5.04 PlyA + 172442 172447    6                               1.05

 6.00 Prom + 174148 174187   40                              -5.36
 6.01 Init + 175473 175528   56  2  2  105   62   101 0.876   7.96
 6.02 Intr + 181331 181485  155  2  2   48   40    39 0.310  -5.18
 6.03 Intr + 182826 182947  122  1  2  128   84    33 0.800   7.11
 6.04 Intr + 186445 186552  108  0  0  114   87   237 0.703  26.68
 6.05 Intr + 200501 200575   75  1  0   78   91    33 0.019   2.31

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:126779400_126980911|GENSCAN_predicted_peptide_1|112_aa
MHNHEEKTLYGPSEKEAVCKLRKKATEEPKPANILITDCPLPELPVVASAAATDSACAFS
PRKRFPVPPPETDSASGDNQEDCKRGLRTGAQTKSTTFLFFVARFDFLKRGX

>gi568815589f:126779400_126980911|GENSCAN_predicted_CDS_1|336_bp
atgcacaaccacgaagaaaagactctgtatgggcccagtgagaaggaggctgtctgcaag
ctgaggaagaaggccacagaagaacccaaacctgctaacatcttgatcacagactgccca
cttccagaactgcctgttgtagcctcagctgccgcaacagattcagcctgtgccttcagc
ccccggaaacgcttcccggtcccgccccccgaaactgacagtgcttccggggacaaccaa
gaagattgcaaacgggggctcaggacaggagcccaaaccaaatcaaccacattcctgttt
tttgttgcacgtttcgacttcctgaagagaggtgnn

>gi568815589f:126779400_126980911|GENSCAN_predicted_peptide_2|467_aa
MEPGTNSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHIFRAHKAVLAASSPYFCD
QVLLKNSRRIVLPDVMNPRVFENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCT
EVLEGNPTVLCQKLNHGSDHQSPSSSSYNGLVESFELGSGGHTDFPKAQELRDGENEEES
TKDELSSQLTEHEYLPSNSSTEHDRLSTEMASQDGEEGASDSAEFHYTRPMYSKPSIMAH
KRWIHVKPERLEQACEGMDVHATYDEHQVTESINTVQTEHTVQPSGVEEDFHIGEKKVEA
EFDEQADESNYDEQVDFYGSSMEEFSGERSDGNLIGHRQEAALAAGYSENIEMVTGIKEE
ASHLGFSATDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK
IHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEAN

>gi568815589f:126779400_126980911|GENSCAN_predicted_CDS_2|1404_bp
atggagcctggaacaaactcttttcgggtagaatttcctgatttttccagcaccattcta
cagaaactgaaccagcagcgccagcaaggacaattatgtgacgtctccattgttgtccaa
ggccacattttccgggcacacaaagccgttcttgctgccagttcaccctacttttgtgac
caggtactcctgaaaaacagcaggagaattgttttgcctgatgtgatgaacccaagagtg
tttgagaacattctcctatctagttatacaggacgtctagtaatgcccgctccagaaatt
gttagttacttgacagcggcaagcttcctccagatgtggcatgtggtagacaaatgcact
gaagttttagagggaaaccctacagtcctttgtcagaagctaaatcatggcagtgaccac
cagtcaccaagcagcagtagttataatggcctggtagagagctttgagctgggctctggg
ggtcatactgattttcccaaagcccaagaactgagagatggtgaaaatgaagaggagagc
accaaagacgagctgtcatcccagctcaccgagcacgaatacctgcccagcaactcgtcc
acagagcatgaccgcctgagcacggaaatggcaagccaggatggggaggagggcgccagc
gacagcgccgagttccactacacccggcccatgtacagcaagcccagcatcatggctcac
aaacgctggatccacgtgaagcccgagcgcttagaacaggcttgcgagggcatggatgtg
cacgcgacctacgacgagcaccaggtcacagagtccatcaacaccgtgcagacagagcac
acggtgcagccttcgggagtggaggaggacttccacatcggggagaagaaagtggaagct
gagtttgatgaacaggctgatgaaagcaattatgatgagcaggtggatttctatggctct
tccatggaagagttttccggagagaggtcagatgggaatctaattgggcacagacaggag
gctgccctcgcagcaggttacagtgagaatattgaaatggtaacagggattaaagaagaa
gcttcccacttaggattctcagccactgacaagctgtatccttgtcagtgtgggaaaagt
ttcactcacaagagtcagagagatcggcacatgagcatgcacctcggtcttcggccttac
ggctgtggggtctgcggtaagaaattcaaaatgaagcaccatctcgtgggccacatgaaa
attcacacaggcataaagccgtatgagtgtaatatctgtgcaaagaggtttatgtggagg
gacagtttccaccggcatgtgacttcttgtactaagtcctacgaagctgcaaaggctgag
cagaatacaactgaggctaactaa

>gi568815589f:126779400_126980911|GENSCAN_predicted_peptide_3|745_aa
MAGILTLGNVDWSEEEAIHCQHQSMKKGTEVGKCGGSCGNTVGKYCECGYETLQLMALMK
IERQLHCVEKVGPVEGTLFDQQGAPRRARAEGRADAASRSRDSGVQTKAAASPRRGSGTT
TGRDSGPRALARGPPRNATTRVGACPEARASRGRGREALPGAGGAGWGGSRSGGDWPGAG
GGGGGAAGGRCERGALDSASMPAYFQSPRFGFGLQLFVVVVVFRNSQHFILKNLKQKRVR
FMSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSP
YFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVI
DKCTQILESIHSKISVGDVDSVTVGAEENPESRNGVKDSSFFANPVEISPPYCSQGRQPT
ASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEIQIEGDHEQGDLLVRESQITEVK
VKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHAYSYSQAASQPTNV
SEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSDLQGLVQGSDSEAMMNNPGYESS
PRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQL
EYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVAEVRSRIESPERTDVYVEQKL
ENDASASEMGLDSRMEIHTVSDAPD

>gi568815589f:126779400_126980911|GENSCAN_predicted_CDS_3|2238_bp
atggctggaattctgaccttgggaaatgtggattggagtgaagaagaggccatccactgc
caacaccaaagtatgaagaaaggtacggaggtgggaaagtgtggaggtagctgtggaaat
acagtaggaaagtactgtgagtgtggttatgaaactttgcaattgatggctctgatgaaa
attgagaggcaattgcactgtgttgaaaaagtgggtcctgttgaaggcacgctttttgac
cagcagggggcgccgaggagagcgcgggctgaaggcagagccgacgccgcttcccggagt
cgggactccggggtccagaccaaggctgccgctagcccgcggcgaggctctgggacgaca
accgggcgggactcaggaccccgggccctggctagaggtccgccgcgcaacgccaccacc
cgggttggcgcctgcccggaagcgcgggcgtccagggggcggggccgggaagcgcttccg
ggggcggggggcgcgggctggggcggcagccggagcggcggggactggcctggcgccggc
ggcggcggagggggcgccgcgggcgggcgatgtgagcgcggcgctctggacagcgcatcc
atgcctgcttatttccagagcccccgctttggctttggacttcagctttttgttgttgtt
gttgtttttcgaaactcccaacatttcattttgaaaaacctcaaacagaaaagagtacgc
ttcatgtcagtagaaatggacagcagcagttttattcagtttgatgtgcccgagtacagc
agcaccgttctgagccagctaaacgaactccgcctgcaggggaaactatgtgacatcatt
gtacacattcagggtcagccattccgagcccacaaagcagtccttgctgccagctcccca
tatttccgggaccattcagcgttaagtaccatgagtggcttgtcaatatcagtgattaaa
aatcccaatgtgtttgagcagttgctttctttttgttacactggaagaatgtccttgcag
ctgaaggatgttgtcagttttctgactgcagccagctttcttcagatgcagtgtgtcatt
gacaagtgcacgcagatcctagagagcatccattccaaaatcagcgttggagatgttgac
tctgttaccgtcggtgctgaagagaatcccgagagtcgaaacggagtgaaagacagcagc
ttctttgccaacccagtggagatctctcctccatattgctctcagggacggcagcccacc
gcaagcagtgacctccggatggagacgacccccagcaaagctttgcgcagccgcttacag
gaggaggggcactcagaccgcgggagcagtgggagcgtttctgaatatgagattcagata
gagggagaccatgagcaaggagacctattggtgagggagagccagatcaccgaggtgaaa
gtgaagatggagaagtccgaccggcccagctgttccgacagctcctccctgggtgacgat
gggtaccacaccgagatggttgatggggaacaagttgtggcagtgaatgtgggctcctat
ggttctgtgctccagcacgcatactcctattcccaagcagcctcacagccaaccaatgta
tcagaagcttttggaagtttgagtaattccagcccatccaggtccatgctgagctgtttc
cgaggagggcgtgcccgccagaagcgggctttgtctgtccacctgcacagtgacctgcag
ggcctggtgcagggctctgacagtgaagccatgatgaacaaccccgggtatgagagcagt
ccccgggagaggagtgcgagagggcattggtacccgtacaatgagaggttgatctgtatt
tactgtggaaagtccttcaaccagaaaggaagccttgataggcacatgcgactccatatg
ggaatcaccccctttgtgtgcaagttctgtgggaagaagtacacacggaaggaccaactg
gagtaccacatccggggccatacagatgataaaccattccgctgtgagatctgcgggaag
tgctttccattccaaggtaccctcaaccagcacttgcggaaaaaccacccaggcgttgct
gaagtcaggagtcgcattgagtcccccgagagaacagatgtgtacgtggaacagaaacta
gaaaatgacgcatcggcctcagagatgggcctagattcccggatggaaattcacacagtg
tctgatgctcccgattaa

>gi568815589f:126779400_126980911|GENSCAN_predicted_peptide_4|51_aa
MSQRLPMAFASNAVQCGLHNICSDSVAALFSYGGALVVRLRAQVLRQIPER

>gi568815589f:126779400_126980911|GENSCAN_predicted_CDS_4|156_bp
atgagccaacgactgccaatggcctttgccagcaatgctgttcagtgcggtctacacaac
atctgctccgactcagtggctgcactgttctcctatggaggtgcactggttgtgcgtctc
agagcccaggttctcaggcagataccagaacgctga

>gi568815589f:126779400_126980911|GENSCAN_predicted_peptide_5|357_aa
MGVAGGGPGVLAAQHPCGRGGRLQMSSEAEAREDRGCSGCALVRPAGRFACLRPYNELVG
GLFCCAWPGPGPARRGPGLQAKAPLPLGRSQGHEEAAAATAARVKVTGRDCGGGESGEIQ
ATIREYNKHLYANKLENLEEMDKFLDTYTLPSLNQEEVESLNRPITGAEIVAIINSLPTK
KSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASVILIPKPGRDTTKKE
NFRPISLMNIDAKILNKILANRIQQHIKKLIHRDQVGFIPGMQGWFNICKSINVIQHINR
TKDKNHMIISIDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIIRAIYDNPTAIVILNG

>gi568815589f:126779400_126980911|GENSCAN_predicted_CDS_5|1074_bp
atgggcgtggcgggcggcgggccgggtgtgctggcagcgcagcatccctgcgggcgggga
gggcgtctgcagatgagctcggaggccgaggcccgggaggaccgcggatgcagcggctgc
gcactggtacgaccagccggccgatttgcgtgtctccgcccctacaacgagctggttggg
gggctgttctgctgcgcctggcccggccccggcccggctcggcgtggccccggcctccaa
gcgaaggcgccgctgccgctgggccgctcccagggccatgaggaagcggcggcagccact
gcggcccgcgtcaaggtgaccggccgggactgcggcggcggggagagcggcgaaatacaa
gctaccatcagagaatacaacaaacacctctatgcaaataaactagaaaatctggaagaa
atggataaattcctcgacacatacactctcccaagtctaaaccaggaagaagttgaatct
ctgaatagaccaataacaggagctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcgtcatcctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacatcgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccgtgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatatgcaaatcaataaatgtaatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacgcttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaa
ataataagagctatttatgacaaccccacagccattgtcatactgaatgggtaa

>gi568815589f:126779400_126980911|GENSCAN_predicted_peptide_6|172_aa
MAYKAIHALAPACLSTASRIDFHIGITDSAFPKSNSSSFPQICYVTSVPSLKKDTPSFWY
LMPKTISSSAGLLQTGYVTCRGCPEAPCGLETMYKRNGLMASVLVTSATPQGSSSSDSLE
GQSCDYASKSYDAVVFDVLKVTPEEFATIESELKSLDGGLKPNQPYFVKVSQ

>gi568815589f:126779400_126980911|GENSCAN_predicted_CDS_6|516_bp
atggcctacaaggccattcatgccctggccccagcctgtctgtcgactgcttccaggatt
gattttcacataggcatcacagattcggcatttcccaaatcaaattcatcatccttcccc
caaatctgctatgtcacctctgttccttccttgaagaaggacacaccatccttctggtac
ctcatgccaaaaaccatctcatcctcagctggacttctccagacaggttatgttacctgc
agaggctgccctgaagctccctgtggcctggagactatgtacaagaggaatggtctgatg
gctagcgtgttggtcacctctgccactccacagggcagcagcagctcggactctctggag
ggccagagctgcgactatgccagcaagagctatgatgccgttgtcttcgatgtcttgaaa
gtgaccccagaggagtttgctaccattgaatctgaacttaaatctcttgatgggggtctg
aaacctaatcagccctattttgtaaaagtttcccag