GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:51:08

Sequence gi568815589f:111427396_111643167 : 215772 bp : 42.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -    766    647  120  1  0   35   91    67 0.231   1.47
 1.07 Intr -   3233   3152   82  1  1   64   92    85 0.855   5.22
 1.06 Intr -   5977   5838  140  1  2  107   78   155 0.953  14.74
 1.05 Intr -   9713   9545  169  1  1   40   69   124 0.677   4.73
 1.04 Intr -  15029  14911  119  2  2   67   52   130 0.938   5.64
 1.03 Intr -  17099  16983  117  2  0  107   79    80 0.968   8.74
 1.02 Intr -  24160  24030  131  2  2   95  121   116 0.842  15.09
 1.01 Init -  56148  56109   40  0  1  102   80    54 0.002   4.58
 1.00 Prom -  59965  59926   40                              -2.75

 2.04 PlyA -  61783  61778    6                               1.05
 2.03 Term -  74330  73726  605  0  2   72   36   274 0.573  14.29
 2.02 Intr -  84150  84036  115  0  1   88   17    44 0.285  -3.60
 2.01 Init -  84613  84536   78  1  0   83   83    70 0.467   7.11
 2.00 Prom -  85992  85953   40                              -5.15

 3.03 PlyA -  89392  89387    6                               1.05
 3.02 Term -  97930  97696  235  0  1   48   44   314 0.923  17.81
 3.01 Init -  98046  97964   83  0  2   83   62    76 0.790   5.01
 3.00 Prom -  99297  99258   40                             -10.35

 4.00 Prom +  99838  99877   40                             -14.62
 4.01 Init + 100001 100412  412  1  1   67  100   283 0.408  24.12
 4.02 Intr + 105015 105281  267  1  0   44   85   143 0.721   6.18
 4.03 Term + 114262 115775 1514  2  2   69   36  1557 0.900 138.28
 4.04 PlyA + 119238 119243    6                               1.05

 5.02 PlyA - 119254 119249    6                               1.05
 5.01 Sngl - 129449 128646  804  2  0   94   32   279 0.911  18.46
 5.00 Prom - 133573 133534   40                              -7.05

 6.13 PlyA - 135205 135200    6                               1.05
 6.12 Term - 135836 135726  111  2  0   66   48   146 0.997   5.98
 6.11 Intr - 142814 142696  119  0  2  118   94   165 0.999  19.36
 6.10 Intr - 147447 147339  109  0  1   81   95    67 0.989   5.64
 6.09 Intr - 151556 151401  156  2  0  100  101   183 0.999  20.09
 6.08 Intr - 156194 156077  118  1  1   78  115   149 0.999  16.15
 6.07 Intr - 158770 158603  168  0  0   93   96    98 0.969   9.24
 6.06 Intr - 165587 165531   57  1  0  108   30    76 0.516   0.88
 6.05 Intr - 166914 166827   88  1  1   77   52    67 0.781   0.11
 6.04 Intr - 170037 169922  116  2  2   94  107    71 0.764   8.77
 6.03 Intr - 173113 173085   29  1  2   72  115    13 0.074  -1.60
 6.02 Intr - 179577 179499   79  2  1  106   99     6 0.859   2.13
 6.01 Init - 182070 181619  452  0  2   41   78   384 0.582  28.13
 6.00 Prom - 195678 195639   40                              -7.25

 7.00 Prom + 197812 197851   40                              -6.75
 7.01 Sngl + 204013 204552  540  0  0   65   38   557 0.827  42.23
 7.02 PlyA + 205170 205175    6                              -0.45

 8.03 PlyA - 205445 205440    6                               1.05
 8.02 Term - 206689 206493  197  2  2   88   39    76 0.306  -0.71
 8.01 Init - 210469 210397   73  1  1   73   49    81 0.385   3.98
 8.00 Prom - 212222 212183   40                              -0.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 122277 121984  294  0  0   37   54   208 0.968   7.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_1|306_aa
MAAAAASASQDELNQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVME
LLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAP
TLLTAMEGKPQPQQDSYVLNESQSRQNSSSAQGSSSNSGGGSGIPQPPPGMSFYAAKRVI
GDNPWTPEQLEQCKLGIVKFIEAEQVPELEAVLHLVIASSDTRHSVATAADLELKSKQSL
IDWNNPAIINKMYKVYLGDIPLKTKEGAVLKPELKRDPVSTRVKLKIVPHLLRSRQAAET
FPANIQ

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_1|918_bp
atggctgcggccgccgcctccgcctcccaggatgagctgaatcagcttgaacgggtcttt
ttacgacttggccatgctgaaacagatgaacaattacagaatattatatctaaattcctt
cctcctgttttgctcaaactctctagcacccaagaaggagtacgtaaaaaggtaatggaa
ctgctggtccatctgaataaacgtataaaaagccgccccaaaatacaacttccagtagag
acactgttggttcagtaccaggaccctgctgcagtttcctttgtcacaaattttactata
atttatgttaaaatgggctatcctcgcctaccagtggaaaaacaatgtgaactggcccct
acgcttcttactgccatggaagggaagcctcagccacagcaggatagttacgtgttaaat
gaatcccagagtcgccaaaattcatcttcagcacagggttcttcttcaaacagtggcgga
ggttctggaatcccacagcctcctccgggaatgagcttttatgcagccaaacgagttatt
ggtgataacccatggacacctgaacaattggaacagtgcaaattgggaatcgtgaaattc
atagaagctgaacaggtgcctgaacttgaagctgttctccacttggtgattgcctctagt
gatacacgccacagtgtggcaacggcagcagacctggaattgaaaagcaaacagagctta
attgactggaataatcctgccatcattaataagatgtacaaggtgtaccttggagatata
ccactgaagacaaaagagggtgcagttctgaagccagagttgaaaagggaccctgtcagt
acaagagtcaagttaaagattgtcccccatctcctccgctctagacaagctgctgaaacg
ttcccagccaacattcag

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_2|265_aa
MMATLSCKTGKFLLGILKGEGVYEQGAFCKKKNMAVFCPTPQAVRPYGYLPSFPENCCYS
VLFQGAYLLPTAINLPSTAPTVPRMFMQWDVCRPTLSCPKFSLSLPPMGAQSLEGVKAAG
GWHVSIASTCTRGQFATVPGLGLNFAPKSEQALGAQRGQAAEAGTSEPVGTGGFLDPQSA
GMPWSTVGLGGGRGTWEGATNSEGGGAPACSQYLCLLPASSTEDAAPTAPPSAAARRLHS
GRSGWAAAAITYKRAYEAMHSGSHV

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_2|798_bp
atgatggcaaccctgagctgcaaaaccggcaagtttttattagggattttaaaaggagag
ggggtgtacgaacagggagctttctgcaagaagaaaaatatggctgtattctgcccaacc
ccacaggcagtcagaccttatggttatcttccctcgttccctgaaaattgctgttattct
gttctttttcagggagcctatctgcttcctactgccatcaacttgccatccacagcaccc
actgtgcccaggatgttcatgcagtgggatgtctgcaggcccacgctgagctgccccaag
ttctccctcagcctccctcctatgggtgctcaaagtctggagggggtcaaggctgcagga
ggctggcatgtcagcattgcaagtacctgcacacgtggccagtttgcgacagtgcctggg
cttggcctcaactttgctccgaaatcggagcaggcgctgggagcacagagaggccaggca
gcggaagcaggtacttctgagcctgtggggacagggggcttcttggacccccagagtgca
gggatgccctggtccacagtggggctgggcggtggcagaggcacctgggaaggcgccacc
aactcagaagggggtggggctcccgcgtgttcccagtacctctgcctgctcccagccagc
tccacagaggatgcagcccccaccgcacctccctccgctgcagccaggcgtcttcacagt
ggccgctctgggtgggctgccgctgccatcacttataaaagagcctatgaggccatgcac
agtggctcacacgtgtaa

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_3|105_aa
MEGSQQPHPAAECAPPTEAAAAQRTARCAPSEPATRPRPRNSGPGTTSTCISIRKQHQRH
RKELPEACPAASARASLREPLRLRRGAEPDSPNALVQLSESPRFP

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_3|318_bp
atggagggaagccaacagccccatcccgcagcggagtgcgcacctcccacagaagcagca
gcagcgcagcgcacagcccgttgtgcgccctcggagccggcgacccggccacggccccga
aactcggggcccgggacgaccagtacctgcatcagcatccgcaaacagcaccaacgccac
cgcaaagagcttccagaagcttgtcccgcagcgagtgcgcgcgcaagcctgcgggaacca
ctgcgcctgcgcagaggcgctgaaccggactccccgaacgcgctcgtgcagctttccgaa
agtccgcgctttccatag

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_4|730_aa
MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY
SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS
EEVVTLIEDLTQMLEEKERQEEIENTKRRCCEELGRVWSDRAVRQGTVAATRSRKRQGTD
YPPEPLKGAQPCQHLDLRLLASRTVREQIPILSHQGYGNLLQLPEEDESALDKIIERCLR
DDDHGLMEESQQYCGSSEEDHGNQGNSKGRVAQNKTLGSGSRGKKFDPDKSPFGHNFKET
SDLIKHLRVYLRKKSRRYNESKKPFSFHSDLVLNRKEKTAGEKSRKSNDGGKVLSHSSAL
TEHQKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNES
GEKTHKCSKCGKAFGYSASLTKHRRIHTGEKPYMCNECGKAFSDSSSLTPHHRTHSGEKP
FKCDDCGKGFTLSAHLIKHQRIHTGEKPYKCKDCGRPFSDSSSLIQHQRIHTGEKPYTCS
NCGKSFSHSSSLSKHQRIHTGEKPYKCGECGKAFRQNSCLTRHQRIHTGEKPYLCNDCGM
TFSHFTSVIYHQRLHSGEKPYKCNQCEKAFPTHSLLSRHQRIHTGVKPYKCKECGKSFSQ
SSSLNEHHRIHTGEKPYECNYCGATFSRSSILVEHLKIHTGRREYECNECEKTFKSNSGL
IRHRGFHSAE

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_4|2193_bp
atgcaagctgtagtgcccttgaacaagatgacagccatctcaccagaacctcaaactctg
gcctcgactgaacaaaatgaggtcccaagagtggttacttctggggaacaagaagctatt
ttaagaggaaatgctgctgatgcagagtctttcagacagaggtttaggtggttttgttac
tcagaagtagctggacccaggaaagctctgagtcaactctgggagctctgcaatcagtgg
ctgagaccagacattcacacgaaagaacagattttagagcttctggtgtttgagcagttc
ctgaccattttgcctggggagatcaggatttgggtaaagtcacaacatcctgagagtagt
gaggaagtggtgaccctaatagaagatttgacccagatgcttgaagaaaaagagaggcag
gaggagattgaaaacacaaagagaaggtgttgtgaagagttaggcagagtttggagtgat
agggccgtaagacaaggaactgtggcagccaccagaagcaggaagaggcaaggaacagat
tatcccccagagcctctgaagggagcacagccctgccaacacctagatctcagacttctg
gcctccagaactgtgagagaacaaattcctattttgagtcaccaaggttatgggaatttg
ttacagctcccagaggaagatgaatcagctttagataaaataatagaaaggtgcctcagg
gatgatgatcatggcttgatggaagaatcccagcaatattgtggcagctcagaggaggat
cacggtaatcagggaaattcaaaaggaagagtcgcacaaaacaaaactcttgggagtggc
agtaggggtaagaaatttgacccagataaaagcccctttggacataatttcaaagaaact
tcagacttaattaaacatctgagagtctacttgaggaagaaatctcggaggtataatgaa
agcaagaaacccttcagttttcattcagaccttgttctgaaccgcaaggagaaaaccgcc
ggagaaaagtcacggaaatctaatgatggtgggaaagtcctgagtcactcttcagctctt
actgaacatcagaaacgtcagaagattcatttgggggataggtcccaaaaatgcagtaag
tgtgggataatctttattagaagatcaactctttctaggagaaaaacccctatgtgtgag
aaatgtcggaaagattcatgtcaagaagcagccttaaataaagatgagggaaatgagagt
ggagaaaaaactcataaatgtagtaagtgtggaaaagcctttggctatagcgcctcactc
accaaacatcggagaattcacactggagaaaaaccctatatgtgtaatgaatgtggaaaa
gcttttagtgatagttcatcgctcacaccacatcatagaactcatagtggagagaaaccc
ttcaaatgtgatgactgtgggaaaggtttcaccctaagtgctcacctcattaaacatcag
agaattcatactggagaaaaaccttataaatgtaaagactgtgggagaccctttagtgac
agttcatctcttattcaacatcagcgaattcatactggagaaaaaccctatacatgtagc
aattgtggaaaatccttcagtcatagctcatccctttccaaacatcagagaattcatact
ggagagaaaccctataaatgtggcgaatgtggaaaagcctttaggcagaattcatgcctt
acccggcatcagagaattcacactggagaaaaaccatatttgtgtaatgattgcggaatg
acttttagccattttacgtctgtgatttatcatcaaagacttcattcaggagaaaaaccc
tacaaatgtaaccagtgtgagaaagccttcccaacccattcactgctaagtcgtcatcag
agaattcatactggtgtaaaaccttataaatgtaaagaatgtgggaagtccttcagtcag
agttcatctcttaatgagcaccaccgaattcatacaggagagaaaccctatgagtgtaac
tattgtggtgcaacctttagtcgaagctcaatccttgtagaacacctaaaaattcatacc
ggaaggagagaatatgaatgtaacgaatgtgagaagacatttaaaagtaattcaggcctc
attagacatcggggatttcactctgcagagtaa

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_5|267_aa
MAGGPQETYNHGRRAKGKQAHLHMAAGESKKGEMLHTSKQPDLMRTHYHENNRREICHHD
PITSHQVPPAALDTNPKPWQFLCGVGLQVQRRQELRFGSLCLDFRECMEMPGCQGRSLLQ
EHSLCGEPLLRQCRGITWGWSPLHSGAVRRWPPSSIPQNGRSTNSLCHAPGKVTGTQQAL
RAAMGIVPCRVTGAEVPKTLEAHPLHQHALDVRHGVKDYYGAIRFNDCPTRFWTCMGPVA
PLSWSISPPWNGSIYPVSVPLFYLGSN

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_5|804_bp
atggctggggggcctcaggaaacttacaatcatggcagaagggcaaaggggaagcaagca
catcttcacatggcagcaggggagagcaaaaagggggaaatgctacacacttctaaacaa
ccagatctcatgagaactcactatcatgagaacaacaggagggaaatctgccaccatgat
cccatcacctcccaccaggtccctcccgcagcattggatacaaaccctaaaccttggcag
tttctatgtggtgttggcctgcaggtgcaaagaagacaagagttgaggtttgggagtctc
tgcctagatttcagagaatgtatggaaatgcctggatgtcaaggcagaagtctgctgcag
gagcacagcctttgtggagaacctctactacggcagtgcagagggataacatggggatgg
agccccctacacagtggagctgtgagaagatggccaccatcctccataccccagaatggt
agatccaccaacagcttgtgccatgcacctggaaaagtcacaggcactcaacaggccttg
agagcagccatgggaattgtaccctgcagagtaacaggggcagaggtgcccaagacctta
gaagcccaccctttgcatcagcatgccctagatgtgagacatggagtcaaagattattat
ggagctataagatttaatgactgccccaccaggttttggacttgcatggggcctgtagcc
cctttgtcttggtcaatctctcctccttggaatgggagcatttacccagtgtctgtaccc
ctgttctatcttggaagtaactaa

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_6|533_aa
MLLCQKAPSLKTTYNHPPAADSAGTALNLETTVKQTRETQLEYNNVGTDLSPEPKSFNYP
LLSSSGDQFEIQLNQQLWSLIPNNDVRRLVSHVIRTLKTDCTETHLQLACAKLISRTGLL
MKLLSEQQELRTVSMTAWKPRMNRKSRSRMRQSHFASHAGRWWHNHSTLQPQSPKLQMAE
LSEARRRSFRMVRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGGLEFLIAYGMLYFVE
VLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSI
SDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGS
VVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFD
NVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQ
GDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVKA

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_6|1602_bp
atgctactatgccagaaggcaccatctctgaaaacaacctacaatcatcctcctgcggca
gattccgctgggactgcattaaacttagagacgactgttaaacaaaccagggaaacacag
ttggaatacaacaacgtgggcactgacctgtcccccgaacccaaaagcttcaattaccca
ttgctctcatcctcaggtgaccagtttgaaattcagctaaaccagcagctatggtccctc
atccccaacaacgatgtgagaaggcttgtttctcatgttatccggaccttgaagacggac
tgcactgagacccatttgcaactggcctgtgccaagctcatctctaggacaggcctccta
atgaagcttctcagtgagcagcaagaattgagaactgtatcaatgacagcatggaagccc
agaatgaacagaaagagcagaagtcgaatgagacagtctcactttgccagccatgctgga
aggtggtggcacaatcatagcacactgcagccacaatctcccaagcttcagatggctgaa
ctgagtgaggcaaggagaaggagcttcaggatggttcgtactaagacatggaccctgaag
aagcactttgttggctatcctactaatagtgactttgagttgaagacagctgagctccca
cccttaaaaaatggaggccttgagtttctaattgcctatggaatgctttattttgtagag
gtcctgcttgaagctttgttcctcaccgtggatccctacatgagagtggcagccaaaaga
ttgaaggaaggtgatacaatgatggggcagcaagtggccaaagttgtggaaagtaaaaat
gtagccctaccaaaaggaactattgtactggcttctccaggctggacaacgcactccatt
tctgatgggaaagatctggaaaagctgctgacagagtggccagacacaataccactgtct
ttggctctggggacagttggcatgccaggcctgactgcctactttggcctacttgaaatc
tgtggtgtgaagggtggagaaacagtgatggttaatgcagcagctggagctgtgggctca
gtcgtggggcagattgcaaagctcaagggctgcaaagttgttggagcagtagggtctgat
gaaaaggttgcctaccttcaaaagcttggatttgatgtcgtctttaactacaagacggta
gagtctttggaagaaaccttgaagaaagcgtctcctgatggttatgattgttattttgat
aatgtaggtggagagttttcaaacactgttatcggccagatgaagaaatttggaaggatt
gccatatgtggagccatctctacatataacagaaccggcccacttcccccaggcccaccc
ccagagattgttatctatcaggagcttcgcatggaagcttttgtcgtctaccgctggcaa
ggagatgcccgccaaaaagctctgaaggacttgctgaaatgggtcttagagggtaaaatc
cagtacaaggaatatatcattgaaggatttgaaaacatgccagctgcatttatgggaatg
ctgaaaggagataatttggggaagacaatagtgaaagcatga

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_7|179_aa
MGAPLLSPGWGAGAAGRRWWMLLAPLLPALLLVRPAGALVEGLYCGTRDCYEVLGVSRSA
GKAEIARAYRQLARRYHPDRYRPQPGDEGPGRTPQSAEEAFLLVATAYETLKVRPAGVEG
LRRLAAGSPRRLPTPVRGAWASVTPKLSTATTATFKILTFPTWPCERAESAPRGLGGHS

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_7|540_bp
atgggggcgccgctgctctctcccggctggggagccggggctgccggccggcgctggtgg
atgctgctggcgcccctgctgccggcgctgctgctggtgcggcccgcgggggccctggtg
gaggggctctactgcggcacgcgggactgctacgaggtgctgggcgtgagccgctcggcg
ggcaaggcggagatcgcgcgggcctaccgccagctggcccggcgctaccaccctgaccgc
taccggccccagcccggagacgagggccccgggcggacgccgcagagcgccgaggaggct
ttcctgctggtggcaaccgcctacgagacactcaaggtgaggcctgcgggcgtggagggg
cttcgaagactggccgcgggaagcccacggcgccttccgaccccggtccgcggagcgtgg
gcctctgtgaccccgaaactgagcacagccaccaccgcgacctttaagatactcacgttt
cccacgtggccctgtgaaagagccgagtcggccccacggggccttggggggcacagctag

>gi568815589f:111427396_111643167|GENSCAN_predicted_peptide_8|89_aa
MARTGETDKDHVKEVREEHLKERNDNFHSKTVGVLGELQNTPLIPSSTSTTPLPLPCSKI
FVAITNPSESRVQVLPTPDILVFNCLNVP

>gi568815589f:111427396_111643167|GENSCAN_predicted_CDS_8|270_bp
atggcgaggacaggagaaacagacaaagatcacgtcaaggaagtcagggaagaacacctt
aaagaacgaaatgataatttccacagtaagacagtgggcgttctgggggagctacagaac
actcccctcattccctcctccaccagtacaactccacttccactcccctgttccaagata
tttgtagctatcacaaacccgtcagagtcaagagtacaagtgttacctactccagacata
ctggtctttaactgcctaaacgttccttga