GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:27:16

Sequence gi568815575f:134277618_134525327 : 247710 bp : 39.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7921   8041  121  0  1   68   86    56 0.169   3.80
 1.02 Intr +  11057  11157  101  0  2   59   58   112 0.169   4.21
 1.03 Term +  17407  17565  159  0  0  128   38    70 0.324   2.96
 1.04 PlyA +  18380  18385    6                               1.05

 2.00 Prom +  21122  21161   40                              -5.55
 2.01 Init +  25539  25699  161  2  2   59   31   156 0.080   6.34
 2.02 Intr +  32164  32354  191  1  2    2   86   128 0.090   2.31
 2.03 Term +  38265  38383  119  1  2   45   32    90 0.154  -3.18
 2.04 PlyA +  39422  39427    6                               1.05

 3.00 Prom +  48788  48827   40                              -3.25
 3.01 Sngl +  50840  52006 1167  1  0   46   43   310 0.660  18.14
 3.02 PlyA +  52876  52881    6                               1.05

 4.00 Prom +  76094  76133   40                              -3.35
 4.01 Init +  87072  87171  100  2  1   55   34   106 0.623   2.37
 4.02 Intr +  90323  90476  154  0  1  124   38    91 0.019   5.91
 4.03 Intr +  95436  95692  257  0  2   32   77   160 0.009   5.46
 4.04 Term +  95831  95949  119  0  2  103   43    60 0.142   0.72
 4.05 PlyA +  96515  96520    6                               1.05

 5.00 Prom +  97792  97831   40                              -6.85
 5.01 Init + 100001 100138  138  1  0   46  115   101 0.982   8.79
 5.02 Intr + 100388 100489  102  1  0   64  119    47 0.952   4.85
 5.03 Intr + 115884 116017  134  2  2   82  -28    69 0.031  -6.78
 5.04 Intr + 116292 116335   44  0  2  103   83    40 0.092   1.97
 5.05 Intr + 126236 126529  294  0  0   39   86   192 0.680  10.16
 5.06 Intr + 135874 136040  167  2  2   27   92   151 0.554   8.16
 5.07 Intr + 136206 136349  144  2  0   89  103    87 0.999   9.86
 5.08 Intr + 137399 137503  105  1  0  108   26    94 0.962   4.69
 5.09 Intr + 139552 139685  134  0  2   88   71    68 0.900   3.62
 5.10 Term + 147584 147713  130  2  1   59   43   223 0.970  11.57
 5.11 PlyA + 149319 149324    6                               1.05

 6.00 Prom + 165105 165144   40                              -4.05
 6.01 Init + 171390 171392    3  2  0  113   81     0 0.336   1.85
 6.02 Intr + 173344 173509  166  0  1  -16   80   124 0.384  -0.19
 6.03 Intr + 174954 175095  142  1  1  125  -16    70 0.261  -1.21
 6.04 Intr + 176168 176282  115  2  1   54  111   136 0.826  12.03
 6.05 Intr + 182143 182222   80  0  2   53   72    21 0.008  -5.57
 6.06 Intr + 182550 182721  172  0  1   39   77   136 0.005   6.62
 6.07 Intr + 195742 195848  107  0  2   85  111    97 0.998   9.79
 6.08 Intr + 197564 197747  184  2  1   71   56   144 0.978   8.37
 6.09 Intr + 208848 208913   66  2  0   61   95    59 0.547   2.08
 6.10 Intr + 212571 212588   18  2  0  130  100     6 0.538   1.89
 6.11 Intr + 215891 215973   83  1  2   59   95    62 0.658   1.52
 6.12 Intr + 220773 220819   47  0  2   62   93    72 0.801   2.23
 6.13 Intr + 220991 221067   77  0  2   62  101    68 0.910   3.82
 6.14 Term + 227606 227668   63  1  0   61   41    75 0.247  -2.99
 6.15 PlyA + 231249 231254    6                               1.05

 7.03 PlyA - 232147 232142    6                               1.05
 7.02 Term - 234526 234420  107  2  2   96   42    71 0.844   0.89
 7.01 Init - 238291 238180  112  1  1   44   84    94 0.477   5.02

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  90323  90480  158  0  2  124   36   119 0.962   7.41
S.002 Term - 182367 182264  104  1  2   56   41   165 0.874   6.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_1|126_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHGVEVPTVEAACGTPDPTAAGSQH
LCQCLELPAPPQQLKCVETSINSNLNSPHTWVTVSVPGILRNYWTVFVADSNSYLSAVFL
LSKFLN

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_1|381_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacggggttgag
gtgcccacagtggaagctgcttgtggtacacctgatccaactgcagcagggagccagcac
ctgtgccagtgcctggagctgcctgccccaccacagcagctgaaatgtgttgaaacatct
ataaactccaacctgaacagcccacacacttgggtaacagtgtctgttcctggcatactc
agaaattactggacagtctttgtagcagattcaaattcctatctttctgcagtcttcctg
ctgtctaaatttcttaactga

>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_2|156_aa
MTDTAEIQRIISGYYKQLYASKLENLEEMDKFLDTYNIPKLNEEEIQNLNNNNNLRHNCF
KENKIPSNPTYKGCEGPLQGELQTTAQQNKRGHKQMEEHSMLMDRKNQYGENGHTAQEMW
SSIRAQLECPRAARQATTDVPVNRSHWSRPTQKSEQ

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_2|471_bp
atgactgatactgcagaaattcagaggatcattagtggctactataagcaactatatgcc
agtaaattggaaaatctagaggaaatggacaaattcctagacacatacaacataccaaaa
ctgaatgaggaagaaatccaaaacctgaacaataataacaacctccggcacaattgcttt
aaagagaataaaatacctagtaatccaacttacaaaggatgtgaaggacctcttcaagga
gaactacaaaccactgctcaacaaaataaaagaggacacaaacaaatggaagaacattcc
atgctcatggataggaagaatcagtatggtgaaaatggccatactgcccaagagatgtgg
tccagcatcagagcacagctagagtgccccagagcagcaaggcaagcaacaactgatgtg
cctgtgaaccgtagtcactggtcccgcccaacccagaaatctgaacagtaa

>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_3|388_aa
MHSSSAKAGSIPLENRHKTRMLSLTTPIQCSIGCPGQGNQAREINKRHPNRKRGSQTIPL
CRRHDPRINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENY
KPLLSEIKENTKKRKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPRTFFTELEKTTL
KFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRNIDQCNRTEPS
EITPHIYNYLIFDKPEKNKQWGKDSVFNKWCWENWLVICRNLKLDPFLTPYTKINSRLIK
DLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKET
TIRVNRQPTKWEKSFATYSSDKGLISRI

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_3|1167_bp
atgcattcatcctcggcaaaagctggaagtattccccttgaaaacaggcacaagacaagg
atgctctctctcaccactcctattcaatgtagtattggatgtcctggccagggcaatcag
gcaagagaaataaataaacggcatccaaataggaagagaggaagtcaaactatccctctt
tgcagacgacatgatcctagaatcaatgtacaaaaatcacaagcattcttatataccaat
aacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagaga
ataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactac
aaaccactgctcagtgaaataaaagagaatacaaagaaacggaagaacattccatgctca
tgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattc
aatgccatccccatcaagctaccaaggactttcttcacagaattggaaaaaactacttta
aagttcatatggaaccaaaaaagagcccgcattgccaagtcaatcctaagccaaaagaac
aaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaa
acagcatggtactggtaccaaaacagaaatatagatcaatgcaacagaacagagccctca
gaaataacaccgcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaa
tggggaaaggattccgtatttaataaatggtgctgggaaaactggctagtcatatgtaga
aacctgaaactggatcccttccttacaccttatacaaaaattaattcaagattaattaaa
gacttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccatt
caggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaact
accatcagagtgaacaggcaacctacaaaatgggagaaaagtttcgcaacctactcatct
gacaaaggactaatatccagaatctag

>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_4|209_aa
MINDEVEMNVGSEVEGSVKNNSLVFGLQNWVDRGPHFSRYLRRAYYEPGTEFYGLRIEQW
TRQNKAPAPIELHSSRETDNKHTNNDIFESLSLSPLILPPNTRRSGGAENRRSAREQEAG
PAAFSRTGGGFCTCAVAVRLQLPPLCGQSGPAARSGRINALWVVCVRGGRLRLWALPVSP
HGTLGPPILSPAGEDKEDGGGQAAAPARC

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_4|630_bp
atgattaatgatgaagtggagatgaatgtggggagtgaagtagagggcagtgtcaagaat
aactccctggtctttggcctgcagaactgggtggatagagggcctcacttcagtagatat
ttacgaagagcctactatgaaccaggcacagagttctatgggctgaggatagagcagtgg
acacgacaaaacaaagctcctgctccaatagagcttcattctagtcgagagacagataat
aaacacacgaacaacgatatctttgaatctctttctctatctcctctgatcctgccccca
aacactcggcggagcggcggagcggagaatagaaggtccgcgcgcgaacaggaggcgggg
cctgccgccttcagtcgtacagggggtggtttctgcacatgcgctgtggctgtgcggctt
cagctgccccctctctgcggccaatcagggcccgcggcgcgctcgggacgtatcaacgct
ctgtgggtcgtgtgcgtgcgaggggggcgactccgcctctgggccctgccggtgagtccc
cacggaaccctggggccccccattctctccccggcgggagaagacaaggaggatggcggt
ggccaggccgccgcccctgcccgttgttaa

>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_5|463_aa
MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
QGIYMVYCRKHKKTAHNSEAWFTEYFKPTLDTYCSEKKIPFKILLLIDNASGHPRALMEI
YKEMNVVFMHASTAFIPQFLEPVDQGVLWTFKSYYLRNTFHEAVAAIHSDFCDESGQADL
EESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHR
SSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGD
FDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIY
KLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQQLNGN

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_5|1392_bp
atgtcaagctcagttgaacagaaaaaagggcctacaagacagcgcaaatgtggcttttgt
aagtcaaatagagacaaggaatgtggacagttactaatatctgaaaaccagaaggtggca
gcgcaccataagtgcatgctcttttcatctgctttggtatcatcacactctgataatgaa
agtcttggtggattttctattgaagatgtccaaaaggaaattaaaagaggcacgaagctg
atgtgttctttgtgccattgtcctggagcaacaattggttgtgatgtgaaaacatgtcac
aggacataccactaccactgtgcattgcatgataaagctcaaatacgagagaaaccttca
caaggaatttacatggtctattgccgaaaacacaagaaaactgcacataactccgaagca
tggtttactgaatattttaagcccactcttgacacctactgctcagagaaaaagattcct
ttcaaaatattactgcttattgacaatgcatctggtcacccaagagctctgatggagatc
tacaaggagatgaatgttgtcttcatgcatgctagtacagcattcattccgcagttctta
gagcccgtggatcaaggagtactttggactttcaagtcttattatttaagaaatacattt
catgaggctgtagctgccatacatagtgatttctgtgatgaatctgggcaagctgattta
gaagaaagttttaatgaacatgaactggagccctcatcacctaaaagtaaaaagaaaagt
cgcaaaggaaggccaagaaaaactaattttaaagggctgtcagaagataccaggtccaca
tcctcccatggaacagatgaaatggaaagtagttcctatagagataggtctccacacaga
agcagccctagtgacaccaggcctaaatgtggattttgccatgtaggggaggaagaaaat
gaagcacgaggaaaactgcatatatttaatgccaagaaggcagctgcccattataagtgc
atgttgttttcttctggcacagtccagctcacaacaacatcaagagcagaatttggagac
tttgatattaaaactgtacttcaggagattaaacgaggaaaaagaatgaaatgtacactt
tgcagtcagcctggtgctactattggatgtgaaataaaagcctgtgttaagacttaccat
taccactgtggagtacaagacaaagctaaatacattgaaaatatgtcacgaggaatttac
aaactatactgtaaaaatcatagtggaaatgatgagagagatgaagaagatgaggaacga
gagagtaaaagccgaggaaaagtagaaattgatcagcaacaactaactcagcagcaactt
aatggaaactag

>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_6|440_aa
MKGQLYKAKKVSTGFGKKAVTQSMMSFANSFVQWWVQKTDHKEFEEKMENEELDRARRYG
LRLFRTLLVGITKGADRGFIQDRGGVFRAKLRSEPMNLYQSPWLWEVRGVFTIVRLAEYV
VYQPAVPMPKPARYRKLPGHQLDSRSQLLQPVKGLGKHWAKSQENGSHSFRRLRRALRRT
SRLSRAAPPLAAPPPPPLLRHRLPPPEQSARAPAGSVMATRSPGVVISDDEPGYDLDLFC
IPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIK
ALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTM
QTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLN
MRKLNPREHKKLVQSDISDA

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_6|1323_bp
atgaaaggacagttatataaggccaaaaaagtgtccactggatttggcaagaaagcagtc
acgcagtcaatgatgtcttttgccaacagttttgtacaatggtgggtgcagaagacagat
cacaaagagtttgaggagaaaatggaaaatgaggaattggatagagcaaggaggtatggc
cttagactattcagaacgttactggtgggaataacaaagggagctgaccgaggatttata
caggaccgtggaggggtgtttagagccaagttgagatctgagcccatgaatctgtaccag
tctccatggttgtgggaagtgagaggagtattcaccattgtgcgccttgctgaatatgtg
gtgtaccagccagctgtccccatgccaaagcctgcaagatacaggaagctgccaggccac
cagttggactctaggtctcaactgttacaaccagttaagggtttggggaagcactgggcc
aagagtcaggaaaatggaagccacagcttcaggcggctgcgacgagccctcaggcgaacc
tctcggctttcccgcgcggcgccgcctcttgctgcgcctccgcctcctcctctgctccgc
caccggcttcctcctcctgagcagtcagcccgcgcgccggccggctccgttatggcgacc
cgcagccctggcgtcgtgattagtgatgatgaaccaggttatgaccttgatttattttgc
atacctaatcattatgctgaggatttggaaagggtgtttattcctcatggactaattatg
gacaggactgaacgtcttgctcgagatgtgatgaaggagatgggaggccatcacattgta
gccctctgtgtgctcaaggggggctataaattctttgctgacctgctggattacatcaaa
gcactgaatagaaatagtgatagatccattcctatgactgtagattttatcagactgaag
agctattgtaatgaccagtcaacaggggacataaaagtaattggtggagatgatctctca
actttaactggaaagaatgtcttgattgtggaagatataattgacactggcaaaacaatg
cagactttgctttccttggtcaggcagtataatccaaagatggtcaaggtcgcaagcttg
ctggtgaaaaggaccccacgaagtgttggatataagccagactttgttggatttgaaatt
ccagacaagtttgttgtaggatatgcccttgactataatgaatacttcagggatttgaat
atgagaaagctgaatcccagagagcataagaagcttgtccagagtgacatctctgatgca
taa

>gi568815575f:134277618_134525327|GENSCAN_predicted_peptide_7|72_aa
MSLNLGLSDASPRTDSGYAFLEDYHRNYACSQSSIAGGHLIGGLLATVSKTAALATLCAL
SSILKPDNISLT

>gi568815575f:134277618_134525327|GENSCAN_predicted_CDS_7|219_bp
atgtccctcaatttgggtttatctgatgcctccccacgaacagactcaggttatgcattt
ttggaggactaccacagaaattatgcttgttctcagagcagcatagcaggaggtcacctc
atcggaggcctcctggccactgtatctaaaacagcagcccttgccactctctgcgccctt
tcctcaatcctcaaacctgacaatatatcgttaacctga