Result of FASTA (omim) for
pF1KSDA1792
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1792, 764 aa
1>>>pF1KSDA1792 764 - 764 aa - 764 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4071+/-0.000431; mu= 19.4330+/- 0.027
mean_var=70.5673+/-14.314, 0's: 0 Z-trim(109.8): 36 B-trim: 0 in 0/52
Lambda= 0.152677
statistics sampled from 18015 (18039) to 18015 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.212), width: 16
Scan time: 11.840
The best scores are: opt bits E(85289)
NP_068598 (OMIM: 614272) FAST kinase domain-contai ( 764) 5063 1125.2 0
XP_011514064 (OMIM: 606965) PREDICTED: fas-activat ( 462) 180 49.6 3.6e-05
XP_011514063 (OMIM: 606965) PREDICTED: fas-activat ( 494) 180 49.6 3.8e-05
XP_005249989 (OMIM: 606965) PREDICTED: fas-activat ( 515) 180 49.6 4e-05
XP_005249990 (OMIM: 606965) PREDICTED: fas-activat ( 515) 180 49.6 4e-05
NP_006703 (OMIM: 606965) fas-activated serine/thre ( 549) 180 49.6 4.2e-05
XP_016867194 (OMIM: 606965) PREDICTED: fas-activat ( 353) 177 48.8 4.6e-05
NP_148936 (OMIM: 606965) fas-activated serine/thre ( 408) 177 48.9 5.2e-05
XP_011514065 (OMIM: 606965) PREDICTED: fas-activat ( 381) 162 45.5 0.00048
XP_016867193 (OMIM: 606965) PREDICTED: fas-activat ( 488) 162 45.6 0.00059
NP_001245390 (OMIM: 606965) fas-activated serine/t ( 522) 162 45.6 0.00063
XP_016867195 (OMIM: 606965) PREDICTED: fas-activat ( 310) 155 44.0 0.0012
NP_004740 (OMIM: 611325) protein TBRG4 isoform 1 [ ( 631) 146 42.2 0.0084
NP_001248763 (OMIM: 611325) protein TBRG4 isoform ( 642) 146 42.2 0.0085
>>NP_068598 (OMIM: 614272) FAST kinase domain-containing (764 aa)
initn: 5063 init1: 5063 opt: 5063 Z-score: 6023.3 bits: 1125.2 E(85289): 0
Smith-Waterman score: 5063; 100.0% identity (100.0% similar) in 764 aa overlap (1-764:1-764)
10 20 30 40 50 60
pF1KSD MAATLKSLKLVRYRAFCSPSAFGAVRSVSYWNVSSTQHGGQDPPEHISLCHSAKKVKNIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MAATLKSLKLVRYRAFCSPSAFGAVRSVSYWNVSSTQHGGQDPPEHISLCHSAKKVKNIC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD STFSSRRILTTSSAHPGLEFSKTSSSKASTLQLGSPRATGVDEEDVEVFDSFENMRVFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 STFSSRRILTTSSAHPGLEFSKTSSSKASTLQLGSPRATGVDEEDVEVFDSFENMRVFLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LRPEYRVHSYNASETSQLLSVSEGELILHKVRVNQNNLQAQVIVDYLCKLSSLPAEQHPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LRPEYRVHSYNASETSQLLSVSEGELILHKVRVNQNNLQAQVIVDYLCKLSSLPAEQHPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD LLGSTSFALLCQLSVKKIQLFDTQDLINVLKAFVILGIPHSHSMLDVYETKCCHQVWEMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LLGSTSFALLCQLSVKKIQLFDTQDLINVLKAFVILGIPHSHSMLDVYETKCCHQVWEMN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD MDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIGENRQVSQDLMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIGENRQVSQDLMQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD KLESLILKYIDLINLEEVGTICLGFFKSSTNLSEFVMRKIGDLACANIQHLSSRSLVNIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 KLESLILKYIDLINLEEVGTICLGFFKSSTNLSEFVMRKIGDLACANIQHLSSRSLVNIV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD KMFRFTHVDHINFMKQIGEIAPQRIPSLGVQGVMHLTLYCSALRFLNEGVMNAVAASLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 KMFRFTHVDHINFMKQIGEIAPQRIPSLGVQGVMHLTLYCSALRFLNEGVMNAVAASLPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD RVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQYPEHLPTCLLGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQYPEHLPTCLLGLA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD FLEYFPVELIDFALSPGFVRLAQERTKFDLLKELYTLDGTVGIECPDYRGNRLSTHLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 FLEYFPVELIDFALSPGFVRLAQERTKFDLLKELYTLDGTVGIECPDYRGNRLSTHLQQE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD GSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD LPFNREATPAENVAKLRLEHVGVSLTDDLMNKLLKGKARGHFQGKTESEPGQQPMELENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LPFNREATPAENVAKLRLEHVGVSLTDDLMNKLLKGKARGHFQGKTESEPGQQPMELENK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD AAVPLGGFLCNVADKSGAMEMAGLCPAACMQTPRMKLAVQFTNRNQYCYGSRDLLGLHNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 AAVPLGGFLCNVADKSGAMEMAGLCPAACMQTPRMKLAVQFTNRNQYCYGSRDLLGLHNM
670 680 690 700 710 720
730 740 750 760
pF1KSD KRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHEKVFTSAL
::::::::::::::::::::::::::::::::::::::::::::
NP_068 KRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHEKVFTSAL
730 740 750 760
>>XP_011514064 (OMIM: 606965) PREDICTED: fas-activated s (462 aa)
initn: 144 init1: 64 opt: 180 Z-score: 213.8 bits: 49.6 E(85289): 3.6e-05
Smith-Waterman score: 180; 24.2% identity (53.2% similar) in 293 aa overlap (260-538:100-382)
230 240 250 260 270 280
pF1KSD TKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIG
:.:. : . : ...: .: .:.
XP_011 DRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRP
70 80 90 100 110 120
290 300 310 320 330
pF1KSD ENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGF-----FKSSTNL-----SEFVMRK
. : : .: : .::.. .... . .:: . : :. : .: .:
XP_011 RPPPVEQVTLQDLSQLIIRNCPSFDIHTIH-VCLHLAVLLGFPSDGPLVCALEQERRLR-
130 140 150 160 170 180
340 350 360 370 380 390
pF1KSD IGDLACANIQHL--SSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHL
. .: : ....: .. :: . . .......: :... : . : ..::
XP_011 LPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHL
190 200 210 220 230 240
400 410 420 430 440 450
pF1KSD TLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLIS
. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:. :
XP_011 ARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLER
250 260 270 280 290 300
460 470 480 490 500 510
pF1KSD EIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LY
. : : . : . :..: :. .: . . :..::::. . . .... :
XP_011 ILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLS
310 320 330 340 350
520 530 540 550 560 570
pF1KSD TLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQY
:: .: .: : ::: :: . :
XP_011 LLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYR
360 370 380 390 400 410
>>XP_011514063 (OMIM: 606965) PREDICTED: fas-activated s (494 aa)
initn: 144 init1: 64 opt: 180 Z-score: 213.3 bits: 49.6 E(85289): 3.8e-05
Smith-Waterman score: 180; 24.2% identity (53.2% similar) in 293 aa overlap (260-538:100-382)
230 240 250 260 270 280
pF1KSD TKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIG
:.:. : . : ...: .: .:.
XP_011 DRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRP
70 80 90 100 110 120
290 300 310 320 330
pF1KSD ENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGF-----FKSSTNL-----SEFVMRK
. : : .: : .::.. .... . .:: . : :. : .: .:
XP_011 RPPPVEQVTLQDLSQLIIRNCPSFDIHTIH-VCLHLAVLLGFPSDGPLVCALEQERRLR-
130 140 150 160 170 180
340 350 360 370 380 390
pF1KSD IGDLACANIQHL--SSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHL
. .: : ....: .. :: . . .......: :... : . : ..::
XP_011 LPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHL
190 200 210 220 230 240
400 410 420 430 440 450
pF1KSD TLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLIS
. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:. :
XP_011 ARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLER
250 260 270 280 290 300
460 470 480 490 500 510
pF1KSD EIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LY
. : : . : . :..: :. .: . . :..::::. . . .... :
XP_011 ILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLS
310 320 330 340 350
520 530 540 550 560 570
pF1KSD TLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQY
:: .: .: : ::: :: . :
XP_011 LLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYR
360 370 380 390 400 410
>>XP_005249989 (OMIM: 606965) PREDICTED: fas-activated s (515 aa)
initn: 144 init1: 64 opt: 180 Z-score: 213.1 bits: 49.6 E(85289): 4e-05
Smith-Waterman score: 180; 24.2% identity (53.2% similar) in 293 aa overlap (260-538:66-348)
230 240 250 260 270 280
pF1KSD TKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIG
:.:. : . : ...: .: .:.
XP_005 DRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRP
40 50 60 70 80 90
290 300 310 320 330
pF1KSD ENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGF-----FKSSTNL-----SEFVMRK
. : : .: : .::.. .... . .:: . : :. : .: .:
XP_005 RPPPVEQVTLQDLSQLIIRNCPSFDIHTIH-VCLHLAVLLGFPSDGPLVCALEQERRLR-
100 110 120 130 140 150
340 350 360 370 380 390
pF1KSD IGDLACANIQHL--SSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHL
. .: : ....: .. :: . . .......: :... : . : ..::
XP_005 LPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHL
160 170 180 190 200 210
400 410 420 430 440 450
pF1KSD TLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLIS
. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:. :
XP_005 ARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLER
220 230 240 250 260
460 470 480 490 500 510
pF1KSD EIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LY
. : : . : . :..: :. .: . . :..::::. . . .... :
XP_005 ILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLS
270 280 290 300 310 320
520 530 540 550 560 570
pF1KSD TLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQY
:: .: .: : ::: :: . :
XP_005 LLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYR
330 340 350 360 370 380
>>XP_005249990 (OMIM: 606965) PREDICTED: fas-activated s (515 aa)
initn: 144 init1: 64 opt: 180 Z-score: 213.1 bits: 49.6 E(85289): 4e-05
Smith-Waterman score: 180; 24.2% identity (53.2% similar) in 293 aa overlap (260-538:66-348)
230 240 250 260 270 280
pF1KSD TKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIG
:.:. : . : ...: .: .:.
XP_005 DRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRP
40 50 60 70 80 90
290 300 310 320 330
pF1KSD ENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGF-----FKSSTNL-----SEFVMRK
. : : .: : .::.. .... . .:: . : :. : .: .:
XP_005 RPPPVEQVTLQDLSQLIIRNCPSFDIHTIH-VCLHLAVLLGFPSDGPLVCALEQERRLR-
100 110 120 130 140 150
340 350 360 370 380 390
pF1KSD IGDLACANIQHL--SSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHL
. .: : ....: .. :: . . .......: :... : . : ..::
XP_005 LPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHL
160 170 180 190 200 210
400 410 420 430 440 450
pF1KSD TLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLIS
. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:. :
XP_005 ARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLER
220 230 240 250 260
460 470 480 490 500 510
pF1KSD EIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LY
. : : . : . :..: :. .: . . :..::::. . . .... :
XP_005 ILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLS
270 280 290 300 310 320
520 530 540 550 560 570
pF1KSD TLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQY
:: .: .: : ::: :: . :
XP_005 LLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYR
330 340 350 360 370 380
>>NP_006703 (OMIM: 606965) fas-activated serine/threonin (549 aa)
initn: 144 init1: 64 opt: 180 Z-score: 212.7 bits: 49.6 E(85289): 4.2e-05
Smith-Waterman score: 180; 24.2% identity (53.2% similar) in 293 aa overlap (260-538:100-382)
230 240 250 260 270 280
pF1KSD TKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIG
:.:. : . : ...: .: .:.
NP_006 DRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRP
70 80 90 100 110 120
290 300 310 320 330
pF1KSD ENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGF-----FKSSTNL-----SEFVMRK
. : : .: : .::.. .... . .:: . : :. : .: .:
NP_006 RPPPVEQVTLQDLSQLIIRNCPSFDIHTIH-VCLHLAVLLGFPSDGPLVCALEQERRLR-
130 140 150 160 170 180
340 350 360 370 380 390
pF1KSD IGDLACANIQHL--SSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHL
. .: : ....: .. :: . . .......: :... : . : ..::
NP_006 LPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHL
190 200 210 220 230 240
400 410 420 430 440 450
pF1KSD TLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLIS
. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:. :
NP_006 ARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLER
250 260 270 280 290 300
460 470 480 490 500 510
pF1KSD EIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LY
. : : . : . :..: :. .: . . :..::::. . . .... :
NP_006 ILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLS
310 320 330 340 350
520 530 540 550 560 570
pF1KSD TLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQY
:: .: .: : ::: :: . :
NP_006 LLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYR
360 370 380 390 400 410
>>XP_016867194 (OMIM: 606965) PREDICTED: fas-activated s (353 aa)
initn: 150 init1: 64 opt: 177 Z-score: 211.9 bits: 48.8 E(85289): 4.6e-05
Smith-Waterman score: 177; 27.1% identity (57.1% similar) in 177 aa overlap (364-538:73-241)
340 350 360 370 380 390
pF1KSD EFVMRKIGDLACANIQHLSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQG
:: . . .......: :... : . :
XP_016 RRLRLPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLL
50 60 70 80 90 100
400 410 420 430 440 450
pF1KSD VMHLTLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYS
..::. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:.
XP_016 AQHLARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMP
110 120 130 140 150
460 470 480 490 500 510
pF1KSD SLISEIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLK
: . : : . : . :..: :. .: . . :..::::. . . ...
XP_016 CLERILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVR
160 170 180 190 200 210
520 530 540 550 560 570
pF1KSD E-LYTLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLG
. : :: .: .: : ::: :: . :
XP_016 RYLSLLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGE
220 230 240 250 260 270
>>NP_148936 (OMIM: 606965) fas-activated serine/threonin (408 aa)
initn: 150 init1: 64 opt: 177 Z-score: 211.0 bits: 48.9 E(85289): 5.2e-05
Smith-Waterman score: 177; 27.1% identity (57.1% similar) in 177 aa overlap (364-538:73-241)
340 350 360 370 380 390
pF1KSD EFVMRKIGDLACANIQHLSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQG
:: . . .......: :... : . :
NP_148 RRLRLPPKPPPPLQPLLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLL
50 60 70 80 90 100
400 410 420 430 440 450
pF1KSD VMHLTLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYS
..::. . :. . ...:.: : . .. :: : :.. :: ::: : . ..:.
NP_148 AQHLARH----RLREPQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMP
110 120 130 140 150
460 470 480 490 500 510
pF1KSD SLISEIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLK
: . : : . : . :..: :. .: . . :..::::. . . ...
NP_148 CLERILAR---EAGVAPLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVR
160 170 180 190 200 210
520 530 540 550 560 570
pF1KSD E-LYTLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLG
. : :: .: .: : ::: :: . :
NP_148 RYLSLLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGE
220 230 240 250 260 270
>>XP_011514065 (OMIM: 606965) PREDICTED: fas-activated s (381 aa)
initn: 150 init1: 64 opt: 162 Z-score: 193.6 bits: 45.5 E(85289): 0.00048
Smith-Waterman score: 162; 28.4% identity (55.6% similar) in 162 aa overlap (379-538:61-214)
350 360 370 380 390 400
pF1KSD QHLSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHLTLYCSALRFLN
: :... : . : ..::. . :. .
XP_011 SDGPLVCALEQERRLRLPPKPPPPLQPLLREARPEELTPHVMVLLAQHLARH----RLRE
40 50 60 70 80
410 420 430 440 450 460
pF1KSD EGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQ
...:.: : . .. :: : :.. :: ::: : . ..:. : . : : .
XP_011 PQLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLERILAR---EAGV
90 100 110 120 130 140
470 480 490 500 510 520
pF1KSD YPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LYTLDGTVGIECP
: . :..: :. .: . . :..::::. . . .... : :: .: .: :
XP_011 APLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLSLLDTAVELELP
150 160 170 180 190 200
530 540 550 560 570 580
pF1KSD DYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTR
::: :: . :
XP_011 GYRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYRQDLTVPPGYCT
210 220 230 240 250 260
>>XP_016867193 (OMIM: 606965) PREDICTED: fas-activated s (488 aa)
initn: 185 init1: 64 opt: 162 Z-score: 192.0 bits: 45.6 E(85289): 0.00059
Smith-Waterman score: 169; 24.6% identity (51.2% similar) in 281 aa overlap (260-538:66-321)
230 240 250 260 270 280
pF1KSD TKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIG
:.:. : . : ...: .: .:.
XP_016 DRPVGGGPSAGPVQGLQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRP
40 50 60 70 80 90
290 300 310 320 330 340
pF1KSD ENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGFFKSSTNLSEFVMRKIGDLACANIQ
. : : .: : .::.. .... . .:: . . : : . : :.:: :
XP_016 RPPPVEQVTLQDLSQLIIRNCPSFDIHTIH-VCLHL----AVLLGF--PSDGPLVCALEQ
100 110 120 130 140
350 360 370 380 390 400
pF1KSD HLSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRI-PSLGVQGVMHLTLYCSALRFLNE
. . .:. .. . : :... : . : ..::. . :. .
XP_016 E----------RRLRLPPKPPPPLQPLLREARPEELTPHVMVLLAQHLARH----RLREP
150 160 170 180 190
410 420 430 440 450 460
pF1KSD GVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQY
...:.: : . .. :: : :.. :: ::: : . ..:. : . : : .
XP_016 QLLEAIAHFLVVQETQLSSKVVQKLVLPFGRLNYLPLE-QQFMPCLERILAR---EAGVA
200 210 220 230 240 250
470 480 490 500 510 520
pF1KSD PEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKE-LYTLDGTVGIECPD
: . :..: :. .: . . :..::::. . . .... : :: .: .: :
XP_016 PLATVNILMSLCQLRCLPFRALHFVFSPGFINYISGTPHALIVRRYLSLLDTAVELELPG
260 270 280 290 300 310
530 540 550 560 570 580
pF1KSD YRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTRS
::: :: . :
XP_016 YRGPRLPRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGEEKYRQDLTVPPGYCTD
320 330 340 350 360 370
764 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 07:21:42 2016 done: Thu Nov 3 07:21:44 2016
Total Scan time: 11.840 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]