GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:16:49

Sequence gi568815585r:76785174_76986091 : 200918 bp : 40.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4761   4900  140  1  2   97   38   116 0.224   4.64
 1.02 PlyA +   5049   5054    6                               1.05

 2.03 PlyA -   5619   5614    6                               1.05
 2.02 Term -  11904  11815   90  0  0   94   44   113 0.939   4.24
 2.01 Init -  13540  13460   81  1  0   60   89    26 0.529   0.92
 2.00 Prom -  19158  19119   40                              -4.65

 3.00 Prom +  26158  26197   40                              -2.65
 3.01 Init +  30074  30126   53  1  2   76   79    18 0.295   0.38
 3.02 Term +  31064  31373  310  2  1   64   43   237 0.631  10.35
 3.03 PlyA +  31734  31739    6                               1.05

 4.07 PlyA -  32018  32013    6                               1.05
 4.06 Term -  34006  33928   79  0  1   87   49    86 0.556   0.86
 4.05 Intr -  36885  36794   92  0  2    9  110   114 0.698   3.57
 4.04 Intr -  41687  41603   85  1  1   77   99    47 0.128   3.60
 4.03 Intr -  45683  45540  144  1  0   77   39   134 0.563   5.88
 4.02 Intr -  45971  45831  141  1  0   54   53   115 0.212   3.15
 4.01 Init -  52083  52004   80  0  2   78   80    54 0.914   4.18
 4.00 Prom -  60192  60153   40                              -5.25

 5.03 PlyA -  60478  60473    6                               1.05
 5.02 Term -  66324  66220  105  0  0   55   55   113 0.090   2.13
 5.01 Init -  68724  68620  105  0  0   60   89    59 0.075   3.47
 5.00 Prom -  96414  96375   40                              -3.95

 6.02 PlyA -  98278  98273    6                               1.05
 6.01 Sngl - 100975  99998  978  1  0   69   49  1390 0.954 129.73
 6.00 Prom - 109286 109247   40                              -7.35

 7.00 Prom + 111351 111390   40                              -0.75
 7.01 Init + 114192 114241   50  2  2   83  103    63 0.647   7.77
 7.02 Intr + 122481 122575   95  0  2  109   78    16 0.075   1.39
 7.03 Intr + 136022 136135  114  0  0   56   68   104 0.701   4.70
 7.04 Intr + 138752 138874  123  0  0   38   80   124 0.821   6.24
 7.05 Intr + 142888 142979   92  2  2   69   32   123 0.589   3.59
 7.06 Term + 143328 143528  201  2  0   24   42   192 0.433   4.61
 7.07 PlyA + 143763 143768    6                               1.05

 8.00 Prom + 144400 144439   40                              -5.75
 8.01 Init + 149537 149587   51  1  0   89  105    15 0.343   4.51
 8.02 Intr + 150609 150724  116  2  2   23   99    31 0.290  -3.97
 8.03 Intr + 152638 152778  141  1  0   19  113    95 0.466   3.65
 8.04 Intr + 156454 156618  165  1  0  -30   76   159 0.478   1.05
 8.05 Intr + 164177 164496  320  2  2   54   32   186 0.261   4.28
 8.06 Intr + 167326 167477  152  2  2   50  116   104 0.660   8.36
 8.07 Intr + 168427 168516   90  0  0   77   59    58 0.660   1.07
 8.08 Intr + 170146 170351  206  0  2   70   64   203 0.892  13.18
 8.09 Intr + 171837 172761  925  0  1  107   55   773 0.305  66.20
 8.10 Term + 174502 174609  108  0  0   87   48    68 0.187   0.23
 8.11 PlyA + 176486 176491    6                               1.05

 9.00 Prom + 178514 178553   40                              -3.45
 9.01 Init + 179915 179963   49  1  1   86   58    63 0.798   2.26
 9.02 Term + 189202 189410  209  2  2   56   37   146 0.083   2.82
 9.03 PlyA + 189893 189898    6                               1.05

10.04 PlyA - 190236 190231    6                               1.05
10.03 Term - 191513 191376  138  2  0   73   43   141 0.962   5.08
10.02 Intr - 195251 195048  204  2  0   90   63   191 0.854  15.27
10.01 Init - 196524 196363  162  0  0   82    3   191 0.865   9.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_1|46_aa
XSAGGPPADVARVSEYHQSIPQMKDTVPKLRSPTGAINQPRASIKI

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_1|141_bp
naatctgcaggtggccctcctgcagatgtggccagagtatcagagtaccaccaatcgatt
ccacaaatgaaggataccgtgcctaaattaagatctcccactggcgctatcaatcagcca
agagcctcaattaaaatttga

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_2|56_aa
MAKQRLENCSVLSYLKKALDIHVINPRYFTISHDAASPDEAEIEMSHRQDQLDVVE

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_2|171_bp
atggcaaagcagagattagaaaattgttctgtgcttagttacctaaaaaaggctcttgat
attcatgtgattaatcccagatattttaccatctcacatgacgctgcttctccagatgaa
gccgagattgaaatgtcacaccggcaggatcaattagatgttgtagaatag

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_3|120_aa
MNKGVCVSSWWNNLLSSGEDDADDNVDDGDGNGDNNGWIMACRALSYKSIQSALLKMFMK
IDQQAAVENLVDMSGRVSRYWFSLVVYRRVYCLLTPTALNDMAEEAQKLQEATASGRSTC

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_3|363_bp
atgaacaaaggagtgtgcgtgtcttcttggtggaacaatttactttcctctggtgaagat
gatgctgatgacaatgttgatgatggtgacggtaatggcgataataatggttggataatg
gcctgcagggctctttcctataaaagcatccagagtgctttactgaaaatgttcatgaag
attgaccaacaagctgcagtagagaacttagtagacatgagtggcagagtctctaggtac
tggttttctctggtagtgtatagacgtgtttactgcctcctcactcccactgcactgaat
gacatggcagaagaggctcagaagctgcaggaggcaactgcttcaggaagaagcacctgt
tag

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_4|206_aa
MNVPTPGDTEKESCDVCVGVFSSTSNRYCGLDRSETVGLVGAESQSVILEAESPGPAFKR
FWEEAANRRRWYRRLSLFLQHRVLELPSGEGSSEPKSPLKWTGFGGYRSKDCDQKATRNW
SLKAVKGMLPAPPGRETRATIQCQGPTWDLCLKQSGKRERSRDQGWEARAGAEREVGITD
SLILDPITLQGVSPSKTSAHRILSAS

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_4|621_bp
atgaatgtccctactcctggtgacactgaaaaggaatcttgtgatgtttgtgttggggta
tttagtagcaccagtaacagatactgtgggcttgacaggagtgaaactgtgggtttggtt
ggtgctgagagtcagtctgtgatcctggaggcagaatcaccgggacccgctttcaagagg
ttctgggaggaagctgcaaaccgacggaggtggtatcggagactgagcttgttcttgcag
cacagggtcttagaactgccgtccggggaaggcagttcagagcccaagagccctttgaaa
tggacaggctttggtggctaccgaagcaaggactgtgaccagaaggcaacacgaaactgg
agtctcaaagcagttaaaggaatgcttccagctccaccagggagagaaacgagggccaca
attcagtgccaggggcctacttgggacttgtgcctgaagcagagtggaaagcgagaaagg
tcccgtgatcaaggatgggaagcaagagcaggagcagagagggaagtgggaatcacagac
agcttaatccttgatcccataacccttcaaggtgtttctcccagtaaaacttctgcacat
cgaatcctgtctgcttcttga

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_5|69_aa
MDRKKTVLNKIGTKIEFEKYREVKKRHKNGVALKMGSSQPRELKLKDCSEKSHGVVLGHE
GHNRPNETF

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_5|210_bp
atggacaggaagaagactgtgctaaacaaaattggcactaaaattgaatttgagaagtac
agagaggttaaaaaaaggcataaaaatggagtagctttgaaaatgggaagcagccagcca
cgagagctgaagctgaaagattgctcagagaaaagccatggagtagttttaggccatgag
ggtcacaacagaccaaatgaaactttctga

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_6|325_aa
MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF
ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE
LASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCG
KTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTC
AFASSTDQSEDKIWTSYTEYVFCRE

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_6|978_bp
atggctctggcggacagcacacgtggattacccaacgggggcggcggcgggggcggcagt
ggctcctcgtcgtcctccgcggagccaccgctcttccccgacatcgtggagctgaacgtg
gggggccaggtgtacgtgacccggcgctgcacggtggtgtcggtgcccgactcgctgctc
tggcgcatgttcacgcagcagcagccgcaggagctggcccgggacagcaaaggccgcttc
tttctggaccgggacggcttcctcttccgctacatcctggattacctgcgggacttgcag
ctcgtgctgcccgactacttccccgagcgcagccggctgcagcgcgaggccgagtacttc
gagctgccagagctcgtgcgccgcctcggggcgccccagcagcccggcccggggccgccg
ccctcgcggcgcggggtgcacaaggagggctcgctgggtgacgagctgctgccgcttggc
tactcggagcccgaacagcaggagggcgcctctgccggggcgccgtcgcccacgctggag
ctggctagccgcagtccgtccgggggcgcggcgggcccgctgctcacgccgtcccagtcg
ctggacggcagccggcgctcgggctacatcaccatcggctaccgcggctcctacaccatc
gggcgggacgcgcaggcggacgccaagttccggcgagtggcgcgcatcaccgtttgcgga
aagacgtcgctggccaaggaggtgtttggggacaccctgaacgaaagccgggaccccgac
cgtcccccggagcgctacacctcgcgctattacctcaagttcaacttcctggagcaggcc
ttcgacaagctgtccgagtcgggcttccacatggtggcgtgcagctccacgggcacctgc
gcctttgccagcagcaccgaccagagcgaggacaagatctggaccagctacaccgagtac
gtcttctgcagggagtga

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_7|224_aa
MAEGKEEQVTSYMDGSRISHSGSLCHSKMSLGCSPDSPFQRPLKTKSVKIATVTSTFNSH
HPDQSAAIDTVASPSTRKNITLTEGPGPYSQSSFSRRKCDNSDGGDPFLLLTSADLDQVF
TLPPDEPDKMKETIMNQKLTKRQAEVHTGRKGTAHRKKKLGVNNIPGIEEVNMFTHQGTV
IHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSIDHKPVLQMV

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_7|675_bp
atggcagaaggcaaggaggagcaagtcacatcttacatggatggcagcagaatctctcac
agtgggtcgctgtgtcattcaaaaatgtcactggggtgctcgccagattcaccctttcag
aggcccctaaagactaagtctgtaaaaattgccacagtcacctcaaccttcaacagccac
caccctgatcagtcagcagccatcgacactgtggcaagtccctccaccagaaaaaatatt
acacttactgaaggtccaggtccatacagtcaaagcagcttttcaagaaggaagtgtgac
aactctgacggtggtgacccttttctcctgctaaccagtgctgatttagaccaagtgttc
actcttccacctgatgagccagataagatgaaagaaacaatcatgaaccaaaaactcacc
aaacggcaagcagaagtgcacactggtcggaaaggaactgctcacaggaaaaagaaatta
ggggtaaacaatatccctggtattgaagaggtgaatatgtttacacaccaaggaacagtg
attcactttaacaaccctgaagttcaggcatcgctggcagcaaacactttcaccatgaca
ggccatgctgagacaaagcagctgacagaaatgctactcagcatcgatcataaaccagtg
ctgcagatggtctga

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_8|757_aa
MAKLTAGKEHLTNLPTLASEFQNLLKVSLLVSRVECLASFKFVSIDPGSCDGPNCSTKAG
SSHGHAADDMKAFSQEGHLASLNSPSLLPDSNWSHPRFHPILRAKPNNAWHATVPSENEV
TTEVPRDSSSPDHSRLDPQQTRNILTFSVIQNEMTEAGDANAMRRSSRSEDILEIDERKD
HRQLSSCVFIPLTFRSFRGQGQPCVLWHTGCCSGLPEDSRAPPSCITSSTVSYGWMVQVP
PGLHVTTPPPPLLPSLTFLHKTPLESFATAIHGLKVGHLTDRVIQRSKRMILDTLGAGFL
GTTTEVFHIASQYSKIYSSNISSTVWGQPDIRLPPTYAAFVNGVAIHSMDFDDTWHPATH
PSGAVLPVLTALAEALPRSPKFSGLDLLLAFNVGIEVQGRLLHFAKEANDMPKRFHPPSV
VGTLGSAAAASKFLGLSSTKCREALAIAVSHAGAPMANAATQTKPLHIGNAAKHGIEAAF
LAMLGLQGNKQVLDLEAGFGAFYANYSPKVLPSIASYSWLLDQQDVAFKRFPAHLSTHWV
ADAAASVRKHLVAERALLPTDYIKRIVLRIPNVQYVNRPFPVSEHEARHSFQYVACAMLL
DGGITVPSFHECQINRPQVRELLSKVELEYPPDNLPSFNILYCEISVTLKDGATFTDRSD
TFYGHWRKPLSQEDLEEKFRANASKMLSWDTVESLIKIVKNLEDLEDCSVLTTLLKGPSP
PEAGIECPQLFQAHIASRRWIYHSGVWRTVALFSQLH

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_8|2274_bp
atggctaagttaactgcaggaaaggagcacttaacaaatctgcccacactggcatcagag
ttccaaaatctcctcaaagtgagtttattagtgtccagggttgagtgtcttgcatctttt
aagtttgtcagcattgatcctggaagttgtgatgggcccaactgcagtactaaagctgga
tccagccatggacatgcagctgacgacatgaaggcattttcccaagaaggccacctggcc
tctctaaactccccctcattactccctgatagcaactggtcccaccccaggtttcatcct
atcctaagagccaagcccaataatgcgtggcatgccaccgtcccctctgaaaacgaagtg
accacggaagtcccacgagactccagcagccctgaccacagccgattggacccacagcag
acacggaatattctaacgtttagtgtaatccaaaatgagatgacagaggcaggagatgca
aatgccatgagaaggtcaagcagatcagaagatattttggaaatagatgaacgcaaggac
cacagacagctgagcagctgtgtgtttattcccctcacgtttcgttccttcaggggccag
ggacagccatgtgttctttggcacacagggtgctgttcaggacttccagaggattccagg
gctccaccttcctgtatcaccagcagcacggtctcatatggatggatggtgcaagtacct
ccagggctccatgtcaccaccccacctcccccactgctccccagtctcacattcctccat
aagacacccctggaaagctttgccacagcaatccatggcttgaaagtgggacacctgaca
gatcgtgttattcagaggagcaagaggatgattctagacactctgggtgctgggttcctg
ggaaccactacggaagtgtttcacatagccagccaatatagcaagatctacagttccaac
atatccagcactgtttggggtcagccagacatcaggctcccgcccacatatgctgctttt
gtgaacggtgtggctattcactccatggattttgatgacacgtggcaccctgccacccac
ccttctggggctgtccttcctgtcctcacagctttagcagaagccctgccaaggagtcca
aagttttctggccttgacctgctgctggctttcaatgttggtattgaagtgcaaggccga
ttactgcatttcgccaaggaggccaatgacatgccaaagagattccatcccccttccgtg
gtaggaacgttgggtagtgctgctgctgcatccaagtttttaggacttagctcgacaaag
tgccgagaagctctggccattgctgtttcccatgctggggcacccatggccaatgctgcc
acccagaccaagcccctccacattggcaatgctgccaagcatgggatagaagctgcattt
ttggcaatgttgggtctccaaggaaacaagcaggtcttggacttggaggcaggatttggg
gccttttatgccaactattccccaaaagtccttccaagcatagcttcctacagttggctg
ctggaccagcaggacgtggcctttaagcgttttcctgcacatttatctacccactgggtg
gcagacgcagctgcatctgtgagaaagcaccttgtagcagagagagccctgcttccaact
gactacattaagagaattgtgctcaggataccaaatgtccagtatgtaaacaggcccttt
ccagtttcggagcatgaagcccgtcattcattccagtatgtggcctgtgccatgctgctt
gatggtggcatcactgtcccctcattccatgaatgccagatcaacaggccacaggtgaga
gagctgctcagtaaggtggagctggagtaccctccggacaacttgccaagcttcaacata
ctgtactgtgaaataagtgtcaccctcaaggatggagccaccttcacagatcgctctgat
accttctatgggcactggagaaaaccactgagccaggaggacctagaggaaaagttcaga
gccaatgcctccaagatgctgtcctgggacacagtggaaagccttataaagatagtcaaa
aatctagaagacctagaagactgttctgtgttaactacacttctcaaaggaccctctcca
ccagaggctggcattgagtgtccacagcttttccaggcacatattgcaagccgtcggtgg
atctaccattctggagtctggaggacagtggccctcttctcacagctccactag

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_9|85_aa
MGFRHVGQAGLELLTSESLFWGMPNSHGKSLTTLRPTSYAEAQDCHREWSHGCMASLQLF
SHPSPGTRHESEDTVVDIQPSQAFR

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_9|258_bp
atggggtttcgccatgttggccaggctggtctcgaactcctgacctcagaatccttgttc
tggggaatgccaaattcgcatggaaaaagcctaaccaccctgaggcctacgagttatgcg
gaagcccaggattgccacagggaatggtcacatggctgcatggccagccttcagctcttc
agccatcctagcccaggcaccagacatgagagtgaagacactgttgtggatatccagcca
agccaagcctttagatag

>gi568815585r:76785174_76986091|GENSCAN_predicted_peptide_10|167_aa
MASKAGNFYVPAEPKLAFVIRIRGISGVSPKVRKVLQLLRLRQIFSGNFVKLNKKGQNLC
SLRRGRDAQVQRTDLSPTWDPIANAPALQWGYAPERNPPQGGARVQPEVGASGSARSFGG
AGVKVFAPNVEQMLIVNHLKGSPTERREMCWRKVPGEPGGTSKTWQT

>gi568815585r:76785174_76986091|GENSCAN_predicted_CDS_10|504_bp
atggcaagcaaagccggcaacttctatgtacctgcagaacccaaattggcatttgtcatc
aggatcagaggtatcagtggtgtgagcccaaaggtccgaaaggtgttgcagcttcttcgc
cttcgtcaaatcttcagtggaaactttgtgaagcttaacaagaaagggcagaatctctgc
agcctccgcaggggccgggatgcgcaggttcagcggacagatctctctcccacctgggac
cccatcgccaacgcgccagcgctccagtggggctatgcgccagagcggaatccgccgcaa
gggggcgcgcgggtgcagccggaggtgggagcgagcggctctgcacgcagcttcggaggt
gctggggtgaaggtatttgcgcctaatgtcgagcagatgctcatcgttaatcacttgaaa
gggagcccaacagaaagaagagaaatgtgctggaggaaagtgccaggagagcccggaggg
acgtccaagacttggcagacctga