GENSCAN 1.0	Date run: 16-Jul-119	Time: 15:40:35

Sequence gi568815589f:121657023_121882401 : 225379 bp : 50.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  17207  17352  146  2  2  108   44    68 0.251   4.33
 1.02 Intr +  21656  21759  104  0  2  111   45    65 0.466   4.39
 1.03 Intr +  24486  24581   96  2  0   58   94    23 0.220   0.11
 1.04 Intr +  42303  42436  134  2  2  109   83   278 0.879  28.84
 1.05 Intr +  44825  44933  109  2  1   31  110    21 0.129  -1.11
 1.06 Intr +  52227  52365  139  2  1   57   86    88 0.499   5.54
 1.07 Intr +  53135  53158   24  0  0  109   83    16 0.628   1.20
 1.08 Term +  53639  53883  245  0  2   60   45   190 0.902   7.96
 1.09 PlyA +  54986  54991    6                               1.05

 2.08 PlyA -  58741  58736    6                               1.05
 2.07 Term -  61614  61487  128  1  2   97   44    51 0.030   0.04
 2.06 Intr -  68771  68634  138  0  0   94   40    39 0.136   0.14
 2.05 Intr -  72509  72436   74  1  2    7   94    92 0.070   0.75
 2.04 Intr -  79897  79811   87  0  0  111  119    -1 0.829   4.39
 2.03 Intr -  80311  80173  139  2  1   77   23    89 0.814   0.82
 2.02 Intr -  80707  80590  118  1  1  101   55    85 0.875   6.54
 2.01 Init -  84316  84188  129  1  0   80   42    14 0.191  -3.75
 2.00 Prom -  84656  84617   40                               0.74

 3.00 Prom +  86711  86750   40                              -8.06
 3.01 Init +  94873  94960   88  0  1   94  103    30 0.640   3.94
 3.02 Intr +  97447  97540   94  2  1  118   96    -3 0.722   2.52
 3.03 Intr +  99991 100144  154  1  1   92   90   189 0.988  19.57
 3.04 Intr + 101876 101974   99  1  0  153  121    56 0.999  15.71
 3.05 Intr + 102863 103417  555  1  0   83  100  1261 0.961 119.84
 3.06 Intr + 106483 106627  145  0  1  125   63   364 0.987  37.46
 3.07 Intr + 106713 106857  145  1  1  114   65   236 0.924  23.24
 3.08 Intr + 109472 109708  237  2  0   87   89   394 0.985  36.13
 3.09 Intr + 111410 111611  202  2  1   89   51   407 0.721  36.39
 3.10 Intr + 113524 113702  179  0  2   98   94   149 0.996  15.22
 3.11 Intr + 115585 116473  889  1  1  108   82   731 0.971  65.82
 3.12 Intr + 117238 117390  153  0  0   97   93   139 0.645  15.57
 3.13 Intr + 119176 119369  194  0  2   68   75   496 0.977  44.59
 3.14 Intr + 124442 124529   88  2  1  110   75   197 0.531  20.57
 3.15 Intr + 125249 125379  131  1  2   97   77   136 0.042  12.89
 3.16 Intr + 129596 129669   74  2  2   73   18   109 0.078   1.45
 3.17 Intr + 133529 133576   48  0  0   22  119    52 0.403   0.35
 3.18 Intr + 134240 134436  197  0  2  112   36    70 0.808   3.33
 3.19 Intr + 134955 135191  237  2  0  109   98    63 0.507   7.21
 3.20 Intr + 135788 135851   64  1  1  -10  110   123 0.384   2.99
 3.21 Intr + 137660 137808  149  0  2   54   70    40 0.138  -1.25
 3.22 Term + 146139 146249  111  2  0   38   42    86 0.082  -2.44
 3.23 PlyA + 146321 146326    6                               1.05

 4.05 PlyA - 147694 147689    6                               1.05
 4.04 Term - 154719 154513  207  0  0   37   55   142 0.292   3.14
 4.03 Intr - 165857 165718  140  0  2  107   70   163 0.573  16.58
 4.02 Intr - 181394 181302   93  0  0   67   75    59 0.835   2.44
 4.01 Init - 181963 181873   91  1  1   70   86   142 0.990  10.85
 4.00 Prom - 193144 193105   40                              -4.76

 5.05 PlyA - 193228 193223    6                               1.05
 5.04 Term - 194577 194492   86  1  2   73   42    90 0.411   0.72
 5.03 Intr - 203421 203315  107  2  2   76   68   215 0.842  18.16
 5.02 Intr - 213726 213475  252  2  0   71   86   328 0.991  27.45
 5.01 Init - 214672 214632   41  1  2   78  108    -6 0.933   0.20
 5.00 Prom - 217008 216969   40                              -3.46

 6.03 PlyA - 217355 217350    6                               1.05
 6.02 Term - 221797 221688  110  2  2   61   49    77 0.863  -0.23
 6.01 Init - 224597 224531   67  2  1   76  111    69 0.992   9.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:121657023_121882401|GENSCAN_predicted_peptide_1|332_aa
XVPLWPNHMEVEGLEAQIIKSIQASALEQKAVHRDVENGTRGHTGDTWEESPQERPGSRR
SLPGSLSEKSPSMEPSAATPFRVTGLQDGERVQGGRFAHFSWQPSRGGTISVPISQGFLS
RRLKGSIKRTKSQPKLDRNHSFRHILPGFRSAAAAAADNERLGGQDGLSLAWFSSKEGLC
PGSMGPPLAAMPLAGERVMKPLELLENGAIVAGRGTEMPFILLCSWQAASDAVIAPPTAP
PTAREEFEVPRGQKNIEVTSITTQEGEGKQGDDDGGQGLPHQPLLRICGKMGEAGAEIPS
HPRQYYSRLTKGVAYCAAGHTALVSPPSVDWM

>gi568815589f:121657023_121882401|GENSCAN_predicted_CDS_1|999_bp
nnggttcctctttggccaaaccacatggaagttgagggtctagaagctcagatcataaag
tctatacaggccagtgccctggagcagaaggcagtgcacagagacgtggagaatggaact
aggggccacacaggagatacctgggaagagtcgcctcaagaaaggccgggctctcggcgc
agcctgcctggcagcctttccgagaagagccccagcatggagccctcggccgccacgccg
ttccgggtcacgggtctgcaggatggagagcgtgttcaaggtggtcgttttgcccacttc
tcatggcaaccctctaggggaggcaccattagtgtgcccatttcacagggcttcctcagc
cgccgcctcaagggctccatcaagcgcaccaagagccagcccaagctggaccgcaaccac
agcttccgccacatcctgccggggttccggagcgccgccgccgccgccgcggacaatgag
aggctgggagggcaggatgggctgtctttggcttggtttagcagcaaggaagggttgtgt
cctggctccatgggacccccactggctgccatgcctctggctggggagagggtcatgaag
cccctggagctgctggagaatggagccatcgtagcggggcgggggacggagatgcctttc
atcctgctctgttcatggcaagctgcttctgatgctgtgatagccccacccactgcccca
cccactgcccgtgaggaatttgaggttccaagaggtcagaagaacatagaggtgacttcc
atcactacccaggagggtgaaggcaaacagggtgatgatgatggtggccagggactcccc
caccagcctctgctcaggatctgtgggaagatgggtgaagctggcgctgaaatccccagc
caccccaggcagtactacagcagactcaccaagggagttgcctattgtgctgcaggccac
actgccctggtgtcaccaccttctgtggactggatgtga

>gi568815589f:121657023_121882401|GENSCAN_predicted_peptide_2|270_aa
MACDPAELTLPMGSSASAIGPPYTPVAETASPKATGFAASIPKDFKQTFVVGAQASLLTW
FWALATPEALEPDLASEDGQVSRNKWKITVFHAGNHMAQPPGPRRRETLLKANYRFQPWQ
VALWGLWAGTTLKSSCLFLSFTYHENVRSTRTGTCTPRLDSFKTSEENMEELLPSIPYCR
KAGPTHSRPVPSDTQLPGMPKSPFPPSREPSPSPCGPTTNSVEPSLSAELAKFSKVTADK
RQSWNFNPAFACSVLWVKRGDQGLVAQGSG

>gi568815589f:121657023_121882401|GENSCAN_predicted_CDS_2|813_bp
atggcatgtgatccggctgagctcaccttacctatggggagttctgcatcagccataggg
ccaccctacacgcctgttgcagaaacagcctccccaaaagctacaggctttgccgcaagc
atccccaaggacttcaaacagacctttgtggtgggagcgcaggcctctctgctgacctgg
ttctgggcacttgcaacccccgaggctctggagccagatctggcttccgaagatggccag
gtctccagaaacaagtggaaaattaccgtcttccatgcaggtaaccacatggcacaacct
ccaggtccaagaagacgagaaacactcctgaaagcaaactatcgcttccagccatggcaa
gtcgccctctggggcctctgggcaggaactaccctgaagtcatcttgtttgtttctgtct
tttacctatcatgaaaatgtccggtccacgagaacagggacctgcacgccccggctggac
tccttcaagacttcagaggagaacatggaggagctgctgccctccatcccttactgcagg
aaggcaggcccaacacatagccgccccgtgcccagtgatacccaactacctggcatgccc
aaaagccctttccctccctcaagggaaccttcaccttcaccctgtggcccaaccaccaac
tcagtggagccttccttgagcgctgagttagctaagttctctaaagtcacagctgacaag
cggcagagctggaatttcaacccagcatttgcctgcagtgtcctgtgggtcaagagagga
gaccagggcctggtggctcaggggagtgggtga

>gi568815589f:121657023_121882401|GENSCAN_predicted_peptide_3|1410_aa
MALAVPCVTWMSWCHLLPGSSKDSMPWRTESLGCRDGCSLCFTSHPVEKLPGKRGGSWLP
RSHLMPRLKESRSHESLLSPSSAVEALDLSMEEEVVIKPVHSSILGQDYCFEVTTSSGSK
CFSCRSAAERDKWMENLRRAVHPNKDNSRRVEHILKLWVIEAKDLPAKKKYLCELCLDDV
LYARTTGKLKTDNVFWGEHFEFHNLPPLRTVTVHLYRETDKKKKKERNSYLGLVSLPAAS
VAGRQFVEKWYPVVTPNPKGGKGPGPMIRIKARYQTITILPMEMYKEFAEHITNHYLGLC
AALEPILSAKTKEEMASALVHILQSTGKVKDFLTDLMMSEVDRCGDNEHLIFRENTLATK
AIEEYLKLVGQKYLQDALGEFIKALYESDENCEVDPSKCSAADLPEHQGNLKMCCELAFC
KIINSYCVFPRELKEVFASWRQECSSRGRPDISERLISASLFLRFLCPAIMSPSLFNLLQ
EYPDDRTARTLTLIAKVTQNLANFAKFGSKEEYMSFMNQFLEHEWTNMQRFLLEISNPET
LSNTAGFEGYIDLGRELSSLHSLLWEAVSQLEQSIVSKLGPLPRILRDVHTALSTPGSGQ
LPGTNDLASTPGSGSSSISAGLQKMVIENDLSGLIDFTRLPSPTPENKDLFFVTRSSGVQ
PSPARSSSYSEANEPDLQMANGGKSLSMVDLQDARTLDGEAGSPAGPDVLPTDGQAAAAQ
LVAGWPARATPVNLAGLATVRRAGQTPTTPGTSEGAPGRPQLLAPLSFQNPVYQMAAGLP
LSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSFSTAAEELARRPGELARRQMSLTEKG
GQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPNLLSTLQYPRPSSGTLASASPDW
VGPSTRLRQQSSSSKGDSPELKPRAVHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEGLG
PDPPHRDRLRSKDELSQAEKDLAVLQDKLRISTKKLEEYETLFKCQEETTQKLVLEYQAR
LEEGEERLRRQQEDKDIQMKGIISRLMSVEEELKKDHAEMQAAVDSKQKIIDAQVYTALR
SLSHDPRSHPHCPQEKRIASLDAANARLMSALTQLKERKVSSVLLTAGTAAKPSLLILHI
STGPQTDQPKKHLTNFKSACVLKNLKPLQLTPDLKPKRLIFFCNTAWPQYKLDNGSKWPE
NGTFDFSILQDLNNFCRKMGKWSEMHRKEFFSLAQSHADNRRLHEPDLQEGIRAVPREDP
QWNYQANSPGIAKQDYMVSCVVEGLKKAAYKAINYDKLKELPKIASEAPWTITDAELRVT
LTVEDIIPQFGLPTSTQQSDNGPAFTSQITQAVPQALGIQWNLHIPYHPQSSGKECAARR
KERAENKNLEGKNVIADGGQQNVCAEKSNQ

>gi568815589f:121657023_121882401|GENSCAN_predicted_CDS_3|4233_bp
atggccttggctgtcccgtgtgtgacctggatgtcatggtgccacctccttcctgggagc
agtaaggattccatgccatggaggacagagagcttgggctgcagggatggatgcagcctc
tgctttacatcccaccccgtggagaagctcccagggaagcggggagggtcatggctgccc
aggtcccatctgatgccgaggctgaaggagtctcgctcccacgagtccctgctcagcccc
agcagtgcggtggaggcgctggacctcagcatggaggaagaggtggtcatcaagcccgtg
cacagcagcatccttggccaggactactgcttcgaggtgacgacgtcatcaggaagcaag
tgcttttcctgccggtctgcagctgagcgggataagtggatggagaacctccggcgagcg
gtgcatcccaacaaggacaacagccggcgtgtggagcacatcctgaagctgtgggtgatc
gaggccaaggacctgccagccaagaagaagtacctgtgcgagctgtgcctggacgatgtg
ctctatgcccgcaccacgggcaagctcaagacggacaatgttttctggggcgagcacttc
gagttccacaacttgccgcctctgcgcacggtcactgtccacctgtaccgggagaccgac
aagaagaagaagaaggagcgcaacagttacctgggcctggtgagcctacctgctgcctcg
gtggccgggcggcagttcgtggagaagtggtacccggtggtgacgcccaaccccaagggc
ggcaagggccctggacccatgatccgcatcaaggcgcgctaccaaaccatcaccatcctg
cccatggagatgtacaaagagttcgctgagcacatcaccaaccactacctggggctgtgt
gcagccctcgagcccatcctcagtgccaagaccaaggaggagatggcatctgccctggtg
cacatcctgcagagcacgggcaaggtgaaggacttcctgacagacctgatgatgtcagag
gtggaccgctgcggggacaacgagcacctcatcttccgggagaacacactggccaccaag
gccattgaggagtacctcaagctagtgggccagaagtacctgcaggacgccctaggtgag
ttcatcaaagcgctgtatgagtcagatgagaactgcgaagtggatcccagcaagtgctcg
gccgctgacctcccagagcaccagggcaacctcaagatgtgctgcgagctggccttctgc
aagatcatcaactcctactgtgtcttcccacgggagttgaaagaggtgtttgcctcgtgg
aggcaggagtgcagcagtcgcggccgcccggacatcagtgagcggctcatcagcgcctcc
ctcttcctgcgcttcctctgcccagccatcatgtcgccctcactcttcaacctgctgcag
gagtaccctgatgaccgcactgcccgcaccctcaccctcatcgccaaggtcacccagaac
ctggccaactttgccaaatttggcagcaaggaggaatacatgtccttcatgaaccagttc
ctagagcatgagtggaccaacatgcagcgcttcctgctggagatctccaaccccgagacc
ctctccaatacagccggcttcgagggctacatcgacctgggccgcgagctctccagcctg
cactcactgctctgggaggccgtcagccagctggagcagagcatagtatccaaactggga
cccctgcctcggatcctgagggacgtccacacagcactgagcaccccaggtagcgggcag
ctcccagggaccaatgacctggcctccacaccgggctctggcagcagcagcatctcagct
gggctgcagaagatggtgattgagaacgatctttccggtctgatagatttcacccggtta
ccgtctccaacccccgaaaacaaggacttgttttttgtcacaaggtcctccggggtccag
ccctcacctgcccgcagctcgagttactcggaagccaacgagcctgatcttcagatggcc
aacggtggcaagagcctctccatggtggacctccaggacgcccgcacgctggatggggag
gcaggctccccggcgggccccgacgtcctccccacagatgggcaggccgctgcagctcag
ctggtggccgggtggccggcccgggcaaccccagtgaacctggcagggctggccacggtg
cggcgggcaggccagacaccaaccacaccaggcacctccgagggcgcgccaggccggccc
cagctgttggcaccgctctccttccagaaccctgtgtaccagatggcggctggcctgccg
ctgtcaccccgtggccttggcgactcaggctctgagggccacagctccctgagctcacac
agcaacagcgaggagttggcggctgctgccaagctgggaagtttcagcactgccgcggag
gagctggctcggcggcccggtgagctggcacggcgacagatgtcactgactgaaaaaggc
gggcagcccacggtgccacggcagaacagtgctggcccccagaggaggatcgaccagcct
ccgcccccacccccgccgccacctcctgccccccgcggccggacgccccccaacctgctg
agcaccctgcagtacccaagaccctcaagcggaaccctggcgtcggcctcacctgattgg
gtgggccccagtacccgcctgaggcagcagtcctcttcctccaagggggacagcccagaa
ctgaagccacgggcagtgcacaagcagggcccttcacctgtgagccccaatgccctggac
cgcacagccgcttggctcttgaccatgaacgcgcagttgttagaagacgagggcctgggc
ccagaccccccccacagggataggctaaggagtaaggacgagctcagccaagcagaaaag
gacctggcggtgctgcaggacaagctgcgaatctccaccaagaagctggaggagtatgag
accctgttcaagtgccaggaggagacgacgcagaagctggtgctggagtaccaggcacgg
ctggaggagggcgaggagcggctgcggcggcagcaggaggacaaggacatccagatgaag
ggcatcatcagcaggttgatgtccgtggaggaagaactgaagaaggaccacgcagagatg
caagcggctgtggactccaaacagaagatcattgatgcccaggtatacacagccctaagg
agcctgtcccatgacccccgctcacatccccattgtccacaggagaagcgcattgcctcg
ttggatgccgccaatgcccgcctcatgagtgccctgacccagctgaaagagaggaaagtg
tcatccgtgctgctcacagcgggcacagctgccaagccttccctgctcatcctccacatc
agcactggtcctcagaccgaccagcccaagaaacatctcaccaatttcaaatccgcctgt
gtcctcaagaacttaaaacctcttcaactcacacctgacctaaaacctaaacgccttatt
ttcttctgcaacaccgcttggccccaatacaaactcgacaatggctctaaatggccagaa
aacggcactttcgatttctccatcctacaagacctaaataatttttgtcgaaaaatgggc
aaatggtctgagatgcacaggaaagagtttttttctctagcccaatctcatgctgataac
cgccggcttcatgagccagacctccaggaaggcattagagcagttccccgagaggatccc
caatggaactaccaggcaaattccccaggtatagctaagcaagattacatggtttcctgc
gtagttgaagggcttaaaaaagcagcttacaaagctattaattatgacaaacttaaagaa
ctacccaagatcgcctcggaagccccctggaccatcacggacgccgagcttcgggtaact
ctgacagtggaggacataattcctcagtttggccttcccacctctacacagcagtctgat
aacggaccagcctttactagccaaatcacccaagcagttcctcaggctcttggtattcag
tggaaccttcatattccttaccatcctcaatcttcaggaaaggagtgtgctgctaggaga
aaggaacgggctgaaaacaagaacttggaaggaaagaatgtcattgctgatggtggacaa
cagaatgtgtgtgctgaaaagtcaaatcagtga

>gi568815589f:121657023_121882401|GENSCAN_predicted_peptide_4|176_aa
MKARRVTGAGAWVTAAAGEAGLDPSEQGKKGHSGCCIERGNSGNRETSEEAVGASRDDSC
SGMCLQAFVEAFFFLAQRKFKMLPLHEQVASLIDLCEYHLSLLDEKRLQGDSRRDIESNT
EITEMASISGVNGPGNERGEACGEKGDRVLRTSFVPGASVTAAIMERQVALPPLYS

>gi568815589f:121657023_121882401|GENSCAN_predicted_CDS_4|531_bp
atgaaggcccgcagggtgacgggagcaggggcgtgggttacagcggcagctggagaggcg
gggctcgatccctcagagcagggcaagaaaggtcattctggatgctgtattgaaaggggc
aatagtggaaacagggagaccagcgaggaggctgtgggggcttcaagggacgacagctgc
tcagggatgtgtctgcaggccttcgtagaagctttctttttcctggctcagaggaagttc
aagatgctgccacttcatgagcaggtggcctcactgattgacctttgcgagtaccacctg
tccctgctggatgaaaaacgcctgcaaggtgacagcagaagggacatagagagcaacact
gagatcactgagatggcctccatctctggggtaaatgggccaggcaatgagcgaggggag
gcttgtggggaaaaaggtgaccgtgtgctgaggaccagcttcgtcccaggcgccagcgtc
accgcagccatcatggagaggcaggtggcattgccccccttatacagctga

>gi568815589f:121657023_121882401|GENSCAN_predicted_peptide_5|161_aa
MSSTDLGVLSGFSKSQQLEKPFAGKEDALDGELTSAPDCNANPEAHLPSICLKQVFPKYA
KQFNYLRLVDRMANLFIRFLGIKGTMKLGPTGFRTFIRSCKLSSSSLSMAAVDILYIDIT
RRWNSMTLDQRDSAGSLLMQLPVIDANTSYIYQAPNTGQVL

>gi568815589f:121657023_121882401|GENSCAN_predicted_CDS_5|486_bp
atgagcagtacagacttgggagtcctcagtggttttagcaagtctcagcagcttgaaaaa
ccattcgctggaaaggaagatgctttggacggcgagctgaccagtgctccagactgcaac
gccaaccccgaagcccacctgccttccatttgcctcaagcaggtgttccccaagtacgca
aaacagttcaactacctgcgcctggtggacaggatggcaaatttgtttatccggttcctg
ggcatcaaggggacaatgaagttggggccaacaggctttcgtaccttcataaggagctgc
aaactcagcagcagcagcctgtccatggctgccgtggacatcctctacattgacatcaca
cggaggtggaactccatgaccctggaccagcgggactcagcaggctctctcctaatgcaa
ctgccggtgattgacgccaacaccagctacatttatcaagcacctaacacaggccaggtg
ctgtaa

>gi568815589f:121657023_121882401|GENSCAN_predicted_peptide_6|58_aa
MLSEAGFVFNTCTAGIDRCASAGPVGKRDNGEDTRSMLRAGRAENPVGKEAYWEVFVK

>gi568815589f:121657023_121882401|GENSCAN_predicted_CDS_6|177_bp
atgctgagtgaagctggttttgtgttcaacacctgtaccgcgggaattgaccgatgtgcc
agcgcaggcccagtgggcaagagggacaatggcgaagacacgcgctccatgctcagggcc
ggcagggcagagaaccctgttggaaaagaagcttattgggaggtctttgtaaaatga