GENSCAN 1.0	Date run:  3-Nov-116	Time: 06:21:44

Sequence gi568815595r:122810146_123061263 : 251118 bp : 44.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6594   6699  106  2  1  103   45    68 0.047   3.79
 1.02 Intr +  16747  16920  174  2  0   88   91    22 0.156   2.41
 1.03 Intr +  23172  23301  130  1  1  113   94   -35 0.007  -0.65
 1.04 Intr +  35618  35726  109  2  1   92  108    28 0.350   5.49
 1.05 Intr +  46162  46229   68  0  2  132  100    35 0.446   6.80
 1.06 Intr +  55009  55075   67  1  1   50   64    89 0.283   1.61
 1.07 Intr +  64477  64560   84  0  0   76   72    41 0.169   1.32
 1.08 Term +  81133  81186   54  0  0  107   48    94 0.302   4.86
 1.09 PlyA +  81990  81995    6                               1.05

 2.04 PlyA -  83081  83076    6                               1.05
 2.03 Term -  88461  88405   57  0  0   91   41    79 0.486   1.19
 2.02 Intr -  93501  93365  137  1  2   80  -23   114 0.464  -0.21
 2.01 Init -  95410  95251  160  1  1   40   72   113 0.562   4.89
 2.00 Prom -  97144  97105   40                              -3.96

 3.23 PlyA -  98599  98594    6                               1.05
 3.22 Term - 100156  99998  159  1  0  129   43   200 0.995  17.54
 3.21 Intr - 100900 100695  206  2  2  132   81   122 0.983  14.82
 3.20 Intr - 101390 101346   45  0  0   97   98    50 0.877   5.28
 3.19 Intr - 101924 101775  150  0  0   63   94    86 0.724   6.83
 3.18 Intr - 102916 102698  219  2  0   18   91   296 0.729  21.17
 3.17 Intr - 103279 103054  226  1  1   73   32   288 0.733  19.26
 3.16 Intr - 103536 103389  148  2  1   88   65   141 0.974  12.04
 3.15 Intr - 103856 103713  144  1  0   83   89   176 0.981  16.60
 3.14 Intr - 105476 105295  182  2  2   87   91   126 0.991  11.47
 3.13 Intr - 105745 105628  118  0  1   52   39   155 0.986   7.47
 3.12 Intr - 111977 111770  208  0  1   90   86   383 0.930  36.44
 3.11 Intr - 112302 112095  208  0  1   35  105   397 0.997  34.75
 3.10 Intr - 113607 113472  136  2  1  105   92   142 0.998  16.87
 3.09 Intr - 116532 116247  286  1  1  104   67   485 0.989  44.40
 3.08 Intr - 117858 117645  214  0  1   98   91   320 0.995  31.59
 3.07 Intr - 118470 118372   99  0  0  104   80   125 0.983  13.61
 3.06 Intr - 118913 118851   63  2  0  114   94    19 0.900   4.01
 3.05 Intr - 120522 120423  100  2  1   61  -37   113 0.387  -3.79
 3.04 Intr - 123109 123021   89  1  2   83  121    43 0.566   5.87
 3.03 Intr - 129325 129280   46  0  1   88   96    -5 0.506  -1.29
 3.02 Intr - 133390 133291  100  2  1   77   92   110 0.816   9.47
 3.01 Init - 138514 138361  154  1  1   74  116   252 0.999  24.74
 3.00 Prom - 138939 138900   40                              -3.26

 4.00 Prom + 141191 141230   40                              -6.16
 4.01 Init + 152189 152386  198  1  0   92   66   128 0.217   9.90
 4.02 Intr + 154090 154153   64  0  1  120   61     0 0.036  -1.21
 4.03 Intr + 171215 171307   93  0  0   50   91    50 0.278   1.44
 4.04 Intr + 178554 178725  172  1  1  103  107    -3 0.386   2.10
 4.05 Intr + 183656 183765  110  2  2  117   30    89 0.573   5.93
 4.06 Intr + 187535 187596   62  0  2  131   66     6 0.379   1.15
 4.07 Term + 189527 189658  132  1  0  121   48   146 0.989  11.99
 4.08 PlyA + 189770 189775    6                               1.05

 5.00 Prom + 190313 190352   40                              -3.96
 5.01 Init + 205767 205933  167  2  2   95   27    79 0.552   1.64
 5.02 Intr + 208655 208777  123  2  0   74   65    50 0.524   1.00
 5.03 Intr + 210757 210877  121  1  1  100  103     7 0.885   3.90
 5.04 Intr + 212276 212433  158  1  2   24   32   165 0.425   3.31
 5.05 Intr + 213335 213389   55  2  1   62   87     8 0.428  -2.92
 5.06 Intr + 213963 214061   99  2  0   64   61    82 0.823   3.41
 5.07 Term + 217000 217845  846  0  0  148   47   213 0.690  16.08
 5.08 PlyA + 218706 218711    6                               1.05

 6.00 Prom + 221156 221195   40                              -3.76
 6.01 Init + 230707 230789   83  0  2   80    4   101 0.130   1.34
 6.02 Term + 243586 243709  124  1  1   85   32   208 0.989  12.76
 6.03 PlyA + 244333 244338    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:122810146_123061263|GENSCAN_predicted_peptide_1|263_aa
GDDLDSIVNSQFISTVVTLHPQEEAEQGEQFCLHGDERATATAIASMLSYLGGACAFLVG
PLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPPSVA
AASQRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGWSGVLDLILTPAHVSQVDAGWIG
FWSIVGGCVVGIAMARQLKEEKVEYGLKEENGFVKNLNIQGVHVQDCYMGILHDNEVWDM
NDPITQSQVTLDASDSFEEGIKK

>gi568815595r:122810146_123061263|GENSCAN_predicted_CDS_1|792_bp
ggagatgaccttgacagtatagtcaacagccagttcatcagcacagtggtcacattgcac
ccacaggaagaagcagagcagggagaacagttctgtcttcatggagatgaaagggccaca
gccacagctattgcatcaatgctcagttatcttgggggagcatgtgcatttttagttgga
ccacttgttgttccagctcccaatgggacatcacctcttcttgctgcagagagcagcagg
gcgcatattaaagatcgcatagaggctgtgttatatgcagaatttggagttgtctgctta
atattttctgcaacactagcttatttcccaccccgacctcctcttcctcccagtgttgct
gcagctagccagcggctgagttatcggagaagcgtttgtagattattaagcaattttcga
tttttgatgattgctttagcatatgccataccacttggtgtatttgctggctggtctgga
gttctggacttaattttaacaccagcgcatgtcagccaagtagatgctggctggattgga
ttttggtccatagttggaggctgtgttgttggaatagctatggcaagacagctcaaggaa
gaaaaagtagaatatggattaaaagaagagaatggatttgtgaaaaatcttaatattcaa
ggagtacatgtgcaggattgttacatgggtatattgcatgacaatgaggtttgggacatg
aatgatcccatcacccagtcccaggtgacacttgatgcctctgactcctttgaagagggc
atcaagaagtga

>gi568815595r:122810146_123061263|GENSCAN_predicted_peptide_2|117_aa
MCIQKKGDLTQEGGEEGLKPGSSPSGQPIQIGIGGWYAPRRIQEKMELIGYVAGTCEYVF
LGQPTGRALPLRLAAFQKGIFQKRRDIPPFLPNDVSVTWRKEEFDTFVFAFLGHIQK

>gi568815595r:122810146_123061263|GENSCAN_predicted_CDS_2|354_bp
atgtgcatccagaagaaaggggacctaacacaggaagggggtgaagaggggctgaagcca
ggaagcagtcctagtgggcaaccaattcagattggtattggaggatggtatgcaccccgc
aggatccaggagaaaatggaactgataggttatgtggcaggaacctgtgaatatgtcttc
cttggacagccaactggacgagccttgcctctgagacttgcagcattccaaaaggggatc
ttccagaagaggagagacatcccgccatttctaccaaacgatgtgtcagtcacctggaga
aaagaggagtttgacacatttgtgtttgctttcctgggccacatccagaaataa

>gi568815595r:122810146_123061263|GENSCAN_predicted_peptide_3|1099_aa
MVLAGPLAVSLLLPSLTLLVSHLSSSQDVSSEPSSEQQLCALSKHPTVAFEDLQPWVSNF
TYPGARDFSQLALDPSGNQLIVGARNYLFRLSLANVSLLQEDTGDVFHQNKRINQERGKH
AIRKAGEERSPLFNGIKADPFGVLLCSETRGPFAHAVLAEPPTATEWASSEDTRRSCQSK
GKTEEECQNYVRVLIVAGRKVFMCGTNAFSPMCTSRQVGNLSRTIEKINGVARCPYDPRH
NSTAVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGL
FAYFFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFY
YNELQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNLSAISQAFNGPFRYQENPRAAWLP
IANPIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSVRFSHLV
VDLVQAKDTLYHVLYIGTESGTILKALSTASRSLHGCYLEELHVLPPGRREPLRSLRILH
SARALFVGLRDGVLRVPLERCAAYRSQGACLGARDPYCGWDGKQQRCSTLEDSSNMSLWT
QNITACPVRNVTRDGGFGPWSPWQPCEHLDGDNSGSCLCRARSCDSPRPRCGGLDCLGPA
IHIANCSRNGAWTPWSSWALCSTSCGIGFQVRQRSCSNPAPRHGGRICVGKSREERFCNE
NTPCPVPIFWASWGSWSKCSSNCGGGMQSRRRACENGNSCLGCGVEFKTCNPEGCPEVRR
NTPWTPWLPVNVTQGGARQEQRFRFTCRAPLADPHGLQFGRRRTETRTCPADGSGSCDTD
ALVEVLLRSGSTSPHTVSGGWAAWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGLPCVGD
AAEYQDCNPQACPEGWSPWSEWSKCTDDGAQSRSRHCEELLPGSSACAGNSSQSRPCPYS
EIPVILPASSMEEATDCAGFNLIHLVATGISCFLGSGLLTLAVYLSCQHCQRQSQESTLV
HPATPNHLHYKGGGTPKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYTTTYYPSPL
NKHSFRPEASPGQRCFPNS

>gi568815595r:122810146_123061263|GENSCAN_predicted_CDS_3|3300_bp
atggtgcttgcaggccccctggctgtctcgctgttgctgcccagcctcacactgctggtg
tcccacctctccagctcccaggatgtctccagtgagcccagcagtgagcagcagctgtgc
gcccttagcaagcaccccaccgtggcctttgaagacctgcagccgtgggtctctaacttc
acctaccctggagcccgggatttctcccagctggctttggacccctccgggaaccagctc
atcgtgggagccaggaactacctcttcagactcagccttgccaatgtctctcttcttcag
gaagatactggagatgtgttccaccaaaataagcgaataaatcaagaaagagggaaacat
gcgattcggaaagcaggagaggaaagaagccccctcttcaatggaatcaaggctgacccc
tttggtgtgctcctctgctcagagactcgaggaccctttgctcatgcggtcctcgcagag
ccgcccaccgccacagagtgggcctccagtgaggacacgcgccgctcctgccaaagcaaa
gggaagactgaggaggagtgtcagaactacgtgcgagtcctgatcgtcgccggccggaag
gtgttcatgtgtggaaccaatgccttttcccccatgtgcaccagcagacaggtggggaac
ctcagccggactattgagaagatcaatggtgtggcccgctgcccctatgacccacgccac
aactccacagctgtcatctcctcccagggggagctctatgcagccacggtcatcgacttc
tcaggtcgggaccctgccatctaccgcagcctgggcagtgggccaccgcttcgcactgcc
caatataactccaagtggcttaatgagccaaacttcgtggcagcctatgatattgggctg
tttgcatacttcttcctgcgggagaacgcagtggagcacgactgtggacgcaccgtgtac
tctcgcgtggcccgcgtgtgcaagaatgacgtggggggccgattcctgctggaggacaca
tggaccacattcatgaaggcccggctcaactgctcccgcccgggcgaggtccccttctac
tataacgagctgcagagtgccttccacttgccggagcaggacctcatctatggagttttc
acaaccaacgtaaacagcatcgcggcttctgctgtctgcgccttcaacctcagtgctatc
tcccaggctttcaatggcccatttcgctaccaggagaaccccagggctgcctggctcccc
atagccaaccccatccccaatttccagtgtggcaccctgcctgagaccggtcccaacgag
aacctgacggagcgcagcctgcaggacgcgcagcgcctcttcctgatgagcgaggccgtg
cagccggtgacacccgagccctgtgtcacccaggacagcgtgcgcttctcacacctcgtg
gtggacctggtgcaggctaaagacacgctctaccatgtactctacattggcaccgagtcg
ggcaccatcctgaaggcgctgtccacggcgagccgcagcctccacggctgctacctggag
gagctgcacgtgctgccccccgggcgccgcgagcccctgcgcagcctgcgcatcctgcac
agcgcccgcgcgctcttcgtggggctgagagacggcgtcctgcgggtcccactggagagg
tgcgccgcctaccgcagccagggggcatgcctgggggcccgggacccgtactgtggctgg
gacgggaagcagcaacgttgcagcacactcgaggacagctccaacatgagcctctggacc
cagaacatcaccgcctgtcctgtgcggaatgtgacacgggatgggggcttcggcccatgg
tcaccatggcaaccatgtgagcacttggatggggacaactcaggctcttgcctgtgtcga
gctcgatcctgtgattcccctcgaccccgctgtgggggccttgactgcctggggccagcc
atccacatcgccaactgctccaggaatggggcgtggaccccgtggtcatcgtgggcgctg
tgcagcacgtcctgtggcatcggcttccaggtccgccagcgaagttgcagcaaccctgct
ccccgccacgggggccgcatctgcgtgggcaagagccgggaggaacggttctgtaatgag
aacacgccttgcccggtgcccatcttctgggcttcctggggctcctggagcaagtgcagc
agcaactgtggagggggcatgcagtcgcggcgtcgggcctgcgagaacggcaactcctgc
ctgggctgcggcgtggagttcaagacgtgcaaccccgagggctgccccgaagtgcggcgc
aacaccccctggacgccgtggctgcccgtgaacgtgacgcagggcggggcacggcaggag
cagcggttccgcttcacctgccgcgcgccccttgcagacccgcacggcctgcagttcggc
aggagaaggaccgagacgaggacctgtcccgcggacggctccggctcctgcgacaccgac
gccctggtggaggtcctcctgcgcagcgggagcacctccccgcacacggtgagcgggggc
tgggccgcctggggcccgtggtcgtcctgctcccgggactgcgagctgggcttccgcgtc
cgcaagagaacgtgcactaacccggagccccgcaacgggggcctgccctgcgtgggcgat
gctgccgagtaccaggactgcaacccccaggcttgcccagaaggctggtcgccctggtct
gagtggagtaagtgcactgacgacggagcccagagccgaagccggcactgtgaggagctc
ctcccagggtccagcgcctgtgctggaaacagcagccagagccgcccctgcccctacagc
gagattcccgtcatcctgccagcctccagcatggaggaggccaccgactgtgcagggttc
aatctcatccacttggtggccacgggcatctcctgcttcttgggctctgggctcctgacc
ctagcagtgtacctgtcttgccagcactgccagcgtcagtcccaggagtccacactggtc
catcctgccacccccaaccatttgcactacaagggcggaggcaccccgaagaatgaaaag
tacacacccatggaattcaagaccctgaacaagaataacttgatccctgatgacagagcc
aacttctacccattgcagcagaccaatgtgtacacgactacttactacccaagccccctg
aacaaacacagcttccggcccgaggcctcacctggacaacggtgcttccccaacagctga

>gi568815595r:122810146_123061263|GENSCAN_predicted_peptide_4|276_aa
MATWSQGRRSYCWRNIGKPDMQARRVVEREEQRCGNDRHRKGEQGLSREKEDGHKMERGD
CGKNFQATHCRVLAPVPQWIPTPDGMAGLLHVPQGKDVTPALVHVWPGEFDSFLGKPTGL
GVGPGKLCWENGQKNQLISPHLGSHAREGYHTSISLVLLETGSSSKPETHHLALICCCCQ
QSAPPAEYSWGTTLEEAFHEIVSGIAPPFPSPAKMLHLCIMPVPCFTQKGKVKGGAVMQT
GPMEREAGSMKTASIWFHADTWSQLDILQHNLWSGA

>gi568815595r:122810146_123061263|GENSCAN_predicted_CDS_4|831_bp
atggccacatggtctcagggaagaaggagctactgctggaggaacatcgggaagcccgac
atgcaggcccggcgggtggtggagagggaggagcagagatgtggaaatgacaggcacagg
aaaggagaacagggtctgtcccgtgagaaagaggacggccacaaaatggaaaggggagat
tgcgggaagaacttccaggcaacccattgtcgagtcctggcacctgtacctcagtggatc
ccaaccccagatgggatggcagggctgctccatgttccacaagggaaagacgtgacccca
gccttggttcatgtgtggccaggcgaatttgacagcttcctgggaaaaccaacaggcctt
ggggtggggcctggaaagctctgctgggagaatggccagaaaaaccaattaatctcgcct
catctgggctctcatgcccgtgagggctaccacacctcaatcagccttgtcctcctcgag
actgggagctcctcgaagccagagacacatcacctagctctaatctgctgctgctgtcag
cagtcagctccccctgctgaatactcttggggaacaactttggaagaagcatttcacgaa
atagtcagcggcatcgcccctccttttcccagcccagcaaagatgctgcatctctgcata
atgcctgtgccctgtttcactcagaagggaaaagtcaagggaggagcagtcatgcagaca
ggaccaatggagcgggaggctggctccatgaagactgccagcatctggttccacgctgat
acttggtcccaactggacatcctgcagcacaatctctggagtggggcctaa

>gi568815595r:122810146_123061263|GENSCAN_predicted_peptide_5|522_aa
MRCLGLKTVHLWLRQIKLCADTGTHRPQKIRFGETQVHWREEPAHAHRIGSQEDEGLIFH
TGKVAPKFFQLAGEAVIGIRHNLDLLSCKACWNLGSWAQQESEESLTLEPGELLKGSMCP
KAPGLCRNITLSLGDIHNNEDSVMAGFSTYSIAFKAFMYSGKARWNPCPSISSQRVEENQ
QTNCQEESSRAPDAQISRSLALHLFTPQSSMKVVNWLAGNELLTQIIGYKRVTKTKHGSV
MAWVPGPHRRCSPDAPTTALAGPSATRTQAGWRRERSSDEGSQAEVAAGGAEARGPPVLP
PAASPTWLQLARARTPTSLPRYPPELLKFASCSPNPRRGSARGSRDSPPRGGCRCPVPRG
SRLPGGAERRELTRWAGGRSGNGAAAQERPPALSAPVQSPPGPAPAALGLPAAAGCAADP
PGSAELGSGTNPRAPTSSRPGARREQGGGDRGSRRREGAVGEELQAKGEKEGSGSEKEEG
AGADLPRRALHPPASRRAEEREGAPCIPRLLGRLPPRACRVW

>gi568815595r:122810146_123061263|GENSCAN_predicted_CDS_5|1569_bp
atgcgatgtctgggcctcaagactgttcatctatggcttcggcagattaaactgtgtgct
gacacagggactcataggcctcagaagatcaggtttggtgagacccaggtccactggagg
gaagaacctgctcatgctcacagaatagggtcccaggaggatgagggccttatattccat
actgggaaagtagcacccaaattcttccaactggctggagaagctgtaataggaatacgt
cataacttggacctgctcagctgcaaggcatgctggaatcttggcagctgggcccagcag
gaaagtgaggaaagtctcactctggaacctggagagctgttgaaagggagcatgtgcccc
aaggcacctggtctatgtagaaacattaccctcagccttggggacattcataacaatgag
gacagtgtcatggcgggattcagcacatacagcattgcctttaaagctttcatgtactca
gggaaagcccgatggaatccttgtccttctatttcaagtcagagagtggaggagaatcag
cagaccaactgccaagaagagagctcaagagctccagatgcccagatctccaggagcctg
gctttgcatctatttacaccacagtcatcaatgaaagtggtgaactggttggctggtaat
gagttgctaactcagatcattggatataagagggtgaccaagactaagcacgggagtgtt
atggcctgggtcccgggtccccatcgccgctgcagcccagatgcgccgaccacagccctg
gcagggcccagtgcaacccggacccaagctggctggcggcgggaacgcagcagcgatgag
ggctctcaagccgaggtggcagcgggaggcgcggaagccaggggaccccctgtcctcccg
cccgcagcctcacctacctggcttcaacttgccagagcccggacccctacctctctaccc
cgatacccacccgagttgctgaagtttgcaagttgcagccccaacccgcgcaggggaagc
gcccggggctcccgggactcacctcccagaggcgggtgcaggtgcccggttccccgcggc
tcccgactcccgggcggcgcggagcggcgggagctaaccagatgggctggcggccggtct
gggaatggggcggccgcgcaggaacggcctccagctctcagcgctccggtgcagtcccca
cccgggcccgcgcccgctgcgctcgggctcccagcagccgctggatgcgctgccgacccg
cccggctcggcggagctgggctctggcaccaacccccgcgctccaactagctcccgaccc
ggcgctcggagagagcagggaggaggagaccgcgggagcagaaggagggagggggcggtg
ggggaggagttgcaagcaaagggagagaaggaggggagcgggagcgaaaaagaggagggg
gctggagcagacctgccgcggcgggcgctgcacccgccagcctcgaggcgcgcggaggag
cgcgagggggcgccctgcatcccgcggctgctcggccgactcccgccccgggcctgccga
gtgtggtga

>gi568815595r:122810146_123061263|GENSCAN_predicted_peptide_6|68_aa
MKKKKDKEEVEKKRKRKGKERKEEEDTDMWFEKKLLFSSSPVVIVIDIVVTIIIIVNIII
IITNPYRA

>gi568815595r:122810146_123061263|GENSCAN_predicted_CDS_6|207_bp
atgaagaagaagaaggataaggaggaagtggaaaagaaaagaaaaaggaaaggaaaggaa
agaaaagaagaggaggacacagacatgtggttcgagaagaagttactcttttcctcctcc
cctgtggtcattgtcattgacattgttgtcaccatcatcatcatcgtcaacatcattatc
atcataactaacccatacagagcctaa