GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:12:05

Sequence gi568815585f:79381486_79651117 : 269632 bp : 37.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  11947  12036   90  2  0   38   92    91 0.339   3.55
 1.02 Intr +  15861  15941   81  1  0   95   71    34 0.144   1.09
 1.03 Intr +  24136  24332  197  2  2   97   24    96 0.720   2.31
 1.04 Term +  24568  24756  189  0  0  100   35   271 0.871  19.47
 1.05 PlyA +  25467  25472    6                               1.05

 2.03 PlyA -  26362  26357    6                               1.05
 2.02 Term -  40851  40474  378  0  0   30   41   208 0.941   4.10
 2.01 Init -  47696  47631   66  2  0   66   89    55 0.816   4.52
 2.00 Prom -  48258  48219   40                              -2.85

 3.00 Prom +  49351  49390   40                              -7.45
 3.01 Init +  50388  50542  155  2  2   60   42   166 0.702   8.70
 3.02 Intr +  51271  51528  258  1  0   85   38   102 0.307   0.56
 3.03 Intr +  52613  52665   53  2  2   56   52   100 0.246   0.83
 3.04 Intr +  71330  71471  142  0  1   66   77    66 0.053   1.79
 3.05 Intr +  78532  78682  151  1  1  104   65    76 0.020   6.14
 3.06 Term +  94245  94349  105  2  0   97   44    81 0.166   2.03
 3.07 PlyA +  94818  94823    6                               1.05

 4.00 Prom +  95857  95896   40                              -7.15
 4.01 Init +  99719 100039  321  1  0   52   89   312 0.750  23.08
 4.02 Intr + 105548 105730  183  1  0   78   62    52 0.199   0.66
 4.03 Intr + 115934 116041  108  1  0   59   68    66 0.012   1.26
 4.04 Intr + 139325 139490  166  1  1   90   80   166 0.985  14.61
 4.05 Intr + 151838 151971  134  0  2   76   52   195 0.254  14.14
 4.06 Intr + 158197 158290   94  0  1   46   89    88 0.181   3.32
 4.07 Intr + 162073 162197  125  2  2   54   96    40 0.055   0.78
 4.08 Intr + 178527 178665  139  2  1   78   50   106 0.095   4.92
 4.09 Term + 183425 183552  128  0  2   86   49    78 0.395   1.16
 4.10 PlyA + 183927 183932    6                               1.05

 5.00 Prom + 184687 184726   40                              -5.75
 5.01 Init + 187945 188033   89  0  2   72   75   103 0.895   7.56
 5.02 Intr + 191004 191041   38  0  2   99   97    30 0.891   1.99
 5.03 Term + 191251 191492  242  2  2   33   43   199 0.950   5.10
 5.04 PlyA + 191999 192004    6                               1.05

 6.02 PlyA - 192902 192897    6                               1.05
 6.01 Sngl - 199217 199041  177  2  0   77   41   179 0.553   6.80
 6.00 Prom - 213847 213808   40                              -3.45

 7.00 Prom + 215448 215487   40                              -3.55
 7.01 Init + 217880 217982  103  1  1   60   68    91 0.779   4.77
 7.02 Intr + 218009 218133  125  0  2   43  113    77 0.642   5.08
 7.03 Intr + 218578 218863  286  0  1  -34   68   317 0.346  13.49
 7.04 Intr + 220335 220437  103  1  1   20   81    67 0.068  -2.49
 7.05 Intr + 220587 220887  301  0  1   38   36   152 0.027   0.81
 7.06 Intr + 220977 221083  107  2  2   41   74   110 0.067   2.99
 7.07 Intr + 225445 225574  130  1  1   89   52    75 0.083   3.78
 7.08 Intr + 230268 230429  162  2  0   66   78    43 0.130   0.35
 7.09 Intr + 231152 231288  137  1  2   93   40    80 0.170   2.15
 7.10 Intr + 237473 237554   82  2  1   70  103    50 0.171   3.42
 7.11 Term + 247135 247206   72  0  0   97   48    52 0.050  -0.97
 7.12 PlyA + 247681 247686    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  86975  86913   63  2  0   84  121    38 0.802   7.90
S.002 Init - 119218 119142   77  1  2   72   91    86 0.801   7.91
S.003 Term - 220800 220576  225  0  0   36   49   261 0.879  12.80
S.004 Init - 221965 221951   15  1  0   85   92     1 0.856   0.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_1|185_aa
XSPSALCLLGRILSSETRSEVAADPYGFAADWKQDMDVHSYYFNIVLLLLASMIRNEGTW
GNCTDLWVRLSPTAIPAKRYPPDTHMGSRVLLSQDLSASKFSMIILETIHSGPKARHTPP
PAQQIYPDRKRDTRLDPSLLSASGPGACWLRRKGKSKESEGEGQLNGNDSGGLPGSQHPQ
EDGCR

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_1|558_bp
ntttctccttctgccttatgtctcctcggtcgaattctttcttctgagacaagaagtgag
gttgctgcagatccatatggatttgcagcagactggaaacaagacatggacgtccactct
tactacttcaacattgtactattgcttctagccagcatgataagaaatgaaggcacttgg
ggaaactgcacagatctctgggtccgcctatctcccactgccatccctgcaaagagatat
cccccggatactcacatgggctcgagagtcttgctgagccaggacttgagtgcctcgaag
ttttcaatgatcattttagaaaccatccacagcggccctaaggcccgtcacactcctccg
cccgcccagcaaatctacccagaccggaagcgcgacacgcgcttagacccgagccttctc
tcagcctcgggaccaggtgcttgttggctacgtcgaaaaggcaaaagtaaagaaagcgaa
ggcgaagggcagctcaatgggaacgattcagggggtcttcccggctcccagcacccccaa
gaagatggctgccggtaa

>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_2|147_aa
MEGWYFIEGKVDIGYIAFVSQRTGPDFPPHECELYLTTNECGGSNRVRLLRLIHKRQCGL
CLTLFWTAYFGESQWPCHEDTRTSMKRSHMVWIRTPATAILDLDSPAPDRASNDWGPSRH
LDCNFTGDSGARTSQLSSSCNHNTQKL

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_2|444_bp
atggaaggatggtattttatcgagggtaaagtggatattggatacattgcatttgtgtca
cagagaacaggccctgattttcctccccatgaatgtgagctgtacctaacgactaatgaa
tgtggtggaagtaaccgtgttagacttctaaggctaattcataaaagacagtgtgggctc
tgtcttaccctcttttggactgcttactttggggaaagccagtggccatgccatgaggac
actcgaacatctatgaagaggtcccacatggtgtggataaggactcctgcaacggccatt
ttggacctagattctcctgccccagacagggcttcaaatgactggggtcccagcagacat
cttgactgcaacttcacaggagactctggagccagaacctctcagctaagcagctcctgc
aatcataacacacagaaactgtga

>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_3|287_aa
MATGIATDDSGGPSGGATAMMLAAAGEAQPGLHAPQSGQELATGRSPSELAEICILNSSW
RWDKNSGPANGGIKRAITQTELKHAPALAMLRAMRKEERRRKELWPFGDPRPRGSPSQGY
DPTPSLGFCGSWRLQASRTCAALIGRICFTDPISLAQPKNLQGWRGAIFLSPAKLSELFL
NLRNPAARKLEDKLKSNWIVWYWFYLYNVKAASTWKTFSPPLNPSPPYPLRHRNYSYACL
PLLPTVSSLRTDKILSDLYPEGGNQATFLYSDLIVVSEYVANGEAVY

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_3|864_bp
atggccactggaattgcaactgatgacagtggtggcccatctggaggggccactgccatg
atgctggccgcagcaggggaggctcagccagggctgcatgctccacagagcggacaagag
ctggcaacaggcagaagcccttctgagttggcagaaatctgcatacttaattcttcctgg
aggtgggacaaaaactctggacccgctaatggcgggattaaaagagctataacacaaaca
gagctgaaacatgcccctgcactcgccatgttacgggcaatgaggaaagaagagagaaga
agaaaagagctgtggccctttggggatcccagacctaggggctccccgagccagggctat
gaccccaccccctctttgggtttctgtggttcctggcgtctccaagcttccaggacatgt
gctgctttgattggtcggatctgcttcacggaccccatctccctggcccagccaaagaac
ctacaaggatggaggggagccatttttctctcccctgcaaagctgtctgaattatttctg
aacttaaggaatcctgcagccagaaaattggaagacaaactgaaatctaactggatcgtt
tggtattggttttacttgtacaacgtcaaagctgcttctacttggaaaacctttagtcca
cctcttaaccccagtcctccttatcctctaagacacaggaattactcatatgcctgtctg
cctttactaccaacagtgagctccttgagaacagacaagatattgagtgacctttatcct
gagggcggaaatcaggcaactttcttatatagtgaccttattgttgtatcagaatatgtt
gctaatggtgaagcagtgtactga

>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_4|465_aa
MARRRSQRVCASGPSMLNSARGAPELLRGTATNAEVSAAAAGATGSEELPPGDRGCRNGG
GRGPAATTSSTGVAVGAEHGEDSLSRKPDPEPGRMDHHQPGTGRYQVALTSNNITLAIRV
STYTFWRDTNIQFVPLPFTDKFNDLIQNITITLESSLIILTRSIHTPQNKAAKRKGNLPG
AGYFYKFQLPATSLPVFFNIQNAQLLNEEDNSESSAIEQPPTSNPAPQIVQAASSAPALE
TDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAAE
TSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYG
AICGFGLSLIKWILIVRLATQYFPVASREWLSENVSSHDFNNYLKGHSELSTLTTNKTLP
REAERKYLGSQLTREVKDLYKVNYKPLLKEIRDDTNKWKNIPCHG

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_4|1398_bp
atggcacgccggcggagccagcgagtctgcgcgagcggtccgagcatgctcaatagcgcg
cgcggcgccccggagcttctccgcggaaccgcgaccaacgcggaggtctcggcggccgct
gcgggagccacaggaagtgaagagcttccgccgggagaccgcggctgcaggaacggaggc
ggaaggggccctgcggcgacgacgtcgtcgacgggggtggccgtgggagctgagcacgga
gaagactccctctctcggaagccggatcccgagccgggcaggatggatcaccaccagccg
gggactgggcgctaccaggtggctctaacttcaaataacatcactctggcgattagggtt
tcaacatatacattttggagagacacaaacattcagtttgtaccactgccctttacagat
aaatttaatgacctgatacagaatattaccatcaccctagaaagttcccttattatcctt
actagatcaattcataccccccagaataaagctgcaaaaagaaaaggaaacttacctggt
gcaggttacttttacaagtttcagcttcctgctacatccctgcctgtcttttttaatatt
cagaatgcccagcttcttaatgaagaggataactcagaatcatcggctatagagcagcca
cctacttcaaacccagcaccgcagattgtgcaggctgcgtcttcagcaccagcacttgaa
actgactcttcccctccaccatatagtagtattactgtggaagtacctacaacttcagat
acagaagtttacggtgagttttatcccgtgccacctccctatagcgttgctacctctctt
cctacatacgatgaagctgagaaggctaaagctgctgcaatggcagctgcagcagcagaa
acatctcaaagaattcaggaggaagagtgtccaccaagagatgacttcagtgatgcagac
cagctcagagtggggaatgatggcattttcatgctggcatttttcatggcatttattttc
aactggcttggattttgtttatccttctgtatcaccaataccatagctggaaggtatggt
gctatctgcggatttggcctttccttgatcaaatggatccttattgtcaggttggcaacc
cagtacttcccagtcgcttctagagaatggcttagtgaaaatgtcagcagccatgatttc
aacaactatctcaaaggtcattccgagctgtccacattgaccaccaacaaaactttgcca
agggaagcagaaagaaaatacctaggaagtcagttaacaagggaagtgaaggacctctac
aaggtgaactacaaaccactgctcaaagaaatcagagatgacacaaacaaatggaaaaac
attccatgccatggatag

>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_5|122_aa
MNTGRHQKVERRQYIGWEPYDMRNNTGEVPPLTTRTVIVIYSVVNRGLYDTGWNMMSVLS
TVARRMKILIMALGQLKGSDSQAEFHGRFDSSFIAASCVRSLNRLNYRTRGGPGIAQPFV
DI

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_5|369_bp
atgaacactggaagacatcaaaaggtggagagaaggcagtacattggctgggagccttat
gatatgagaaacaacacaggtgaagttccgcccttgaccacacgcacagttattgttatt
tattcagtggtaaatcgtggcctgtacgacactggatggaatatgatgtcagtgctttca
acagtagccagaagaatgaagattctaatcatggctcttggtcagctcaagggctctgat
agtcaagctgaatttcacgggaggtttgattcatctttcattgctgcctcctgtgttagg
tctcttaacagattgaattatagaactagaggaggcccaggaatagcccaaccatttgtg
gacatttag

>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_6|58_aa
MGTTTKILYEKINPKTHNHQILQGRNQEKMLRAVREKGQVTYKGKPIRLTVDLSAETL

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_6|177_bp
atggggaccaccactaagatactctatgagaagatcaaccccaagacacataatcatcag
attctccaaggtcgaaatcaggaaaaaatgttaagggcagtcagagagaaaggccaggtc
acctacaaagggaagcccatcagactaacagtggacctttcagcagaaaccctataa

>gi568815585f:79381486_79651117|GENSCAN_predicted_peptide_7|535_aa
MKPQTLAVSVTVLKGGVSEFAPSDVQMCLEFLPSGVKLQTFAVSVTALKVAQLELFVPPG
GLVISLASGVKLQTFTAPPDSGAQLASPSRSRTGAAGGAACQSRAMRLHSSAVGLSMGLG
AVEQGMALVEEARAAQEPTERVGGSGMAGCSSRALPRGKAAKAQREIERSAVIQLVKGGR
DCYGLNVVSPPKFMLKPNHQGDGIGRGSSIRVLCWTPANFSRDGTRFKRLKKRPRASKQD
IESYWDGPVVAGPIHHTGTVQWWQDRSTIQERSSGGRLDRRPTTTCKKHAVDTAPSLRTL
PSNLHVVHLPYTRHHLESGDLALTKQLNLLAPRSWNYPSSELSRRCKRWAPTTLGSSAPV
ALQGTAPSWLLAQAGVECLAFQVHGVFFEVLVFGSFSSLARQGKTSQSVQVVIKFNWRFS
SPCGLSPVPLEAILKDACEAQHHMEAAKAWGLYPLKSWPEWYLVPFSMDGAAGTQGTNSL
GCTQCEGYLFLQASRSHPTNAFGLSPWILANVCIFLIGFGFCQSVSHGTSGFIPT

>gi568815585f:79381486_79651117|GENSCAN_predicted_CDS_7|1608_bp
atgaagccgcagaccctggcagtgagtgttacagttcttaaaggcggcgtgtcggagttt
gctccttctgatgttcagatgtgtttggagtttcttccttctggagtgaagctgcagacc
ttcgcggtgagtgttacagctcttaaggtggcgcaactggagttgttcgttcctcccggt
gggctcgtgatctcgctggcttcaggagtgaagctgcagaccttcacggccccaccagac
tcaggagcccagctggcttcacccagtagatcccgcactggggctgcaggtggagctgcc
tgccagtcccgtgccatgcgcctgcactcctcagccgttgggttgtcgatgggactgggc
gcagtggagcaggggatggcgctcgtcgaggaggctcgggccgcacaggagcccacggag
agggtgggaggctcaggcatggcgggctgcagttcccgagccctgccccgtgggaaagca
gctaaggcccagcgagaaattgagcgcagcgccgtcatacaactggtaaagggtggcaga
gactgctatggtttgaatgtggtgtcccccccaaaattcatgttgaaacctaaccatcaa
ggtgatggtattggaagaggaagcagcatcagggtgttgtgttggacccctgcaaacttc
agtagggatggcaccaggttcaagaggctgaagaagagacccagagccagcaaacaagac
atagagtcttactgggacggtccagtggtggcaggaccgatccaccatacaggaacggtc
cagtggtggcaggaccgatccaccatacaggaacggtccagtggtggcaggctagacagg
agacccacaaccacttgcaaaaagcatgcagttgatacagcaccttcactcagaaccctc
cccagcaacctccatgtggtgcatctaccatacacaaggcaccatcttgagagtggagac
ttggccctcaccaaacaattgaacctgctggcacctagatcttggaactacccgtcttca
gaactgtcacgccgatgtaagaggtgggctcccacaaccttgggcagctctgcccctgtg
gctttgcagggtacagccccctcgtggctgcttgcacaggctggtgttgagtgtctggct
ttccaggtgcatggtgtgttctttgaggttcttgtatttggaagttttagttctctagca
aggcaggggaagacttctcaatcagttcaagttgttataaagttcaattggaggttttct
tctccctgtggcctttccccagtgcctctggaagccatccttaaggacgcctgtgaggct
caacaccacatggaagctgccaaggcttggggcttgtaccctctgaagtcatggcctgag
tggtaccttgtcccttttagcatggatggagcagctggaacacagggcaccaactcccta
ggctgtacacagtgtgagggctatctttttctccaagcttcccggagccaccctaccaat
gcgtttggattgtctccctggatccttgccaacgtgtgtattttcctcatcggttttggt
ttctgtcagtcagtgtcacatggcacttccggcttcatccctacttga