GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:11:30

Sequence gi568815587r:123534146_123753801 : 219656 bp : 44.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15774  15835   62  2  2   60   54    78 0.263   2.32
 1.02 Intr +  37059  37208  150  0  0   79   60    64 0.001   1.98
 1.03 Intr +  43222  43569  348  1  0   82   53   352 0.227  25.57
 1.04 Intr +  47315  47474  160  2  1   87  110     5 0.103   2.59
 1.05 Intr +  50167  50187   21  0  0  122  101    -8 0.031   1.64
 1.06 Intr +  56807  56923  117  1  0   99   92    54 0.045   7.56
 1.07 Intr +  59937  60021   85  2  1   83   97   120 0.693  11.79
 1.08 Intr +  60590  60693  104  0  2  112   63    48 0.888   4.59
 1.09 Intr +  61797  61892   96  2  0   43  115    97 0.838   8.11
 1.10 Term +  62755  62826   72  0  0  -21   42    99 0.239  -7.69
 1.11 PlyA +  63482  63487    6                              -1.95

 2.02 PlyA -  63593  63588    6                               1.05
 2.01 Sngl -  65307  64372  936  0  0   95   47   545 0.998  47.59
 2.00 Prom -  66694  66655   40                              -9.95

 3.00 Prom +  67130  67169   40                              -6.66
 3.01 Init +  68940  68986   47  2  2   43  100    -3 0.069  -3.45
 3.02 Intr +  69229  69396  168  1  0   37   84   168 0.172  10.36
 3.03 Intr +  71177  71333  157  2  1   78   64   195 0.990  16.11
 3.04 Intr +  72464  72653  190  1  1   66   86   296 0.999  26.36
 3.05 Intr +  74514  74657  144  1  0  101   38   363 0.999  32.85
 3.06 Intr +  75650  75768  119  0  2   85   99    86 0.877   9.58
 3.07 Intr +  76051  76193  143  0  2  106   64   275 0.826  26.05
 3.08 Intr +  78616  78719  104  1  2  108   71   171 0.948  17.22
 3.09 Intr +  79310  79513  204  0  0   81   89   170 0.996  15.57
 3.10 Intr +  80600  80690   91  0  1  112   47   156 0.980  12.95
 3.11 Intr +  84548  84655  108  2  0   98   84    80 0.986   8.00
 3.12 Intr +  84962  85079  118  2  1  122   94    20 0.974   6.47
 3.13 Term +  88361  88450   90  1  0   96   48   179 0.994  12.42
 3.14 PlyA +  88885  88890    6                               1.05

 4.10 PlyA -  89283  89278    6                               1.05
 4.09 Term - 100061  99998   64  1  1  122   42    59 0.906   2.06
 4.08 Intr - 104179 104041  139  2  1   98   96   128 0.962  14.12
 4.07 Intr - 108526 108301  226  1  1  126   72   417 0.998  41.46
 4.06 Intr - 111605 111442  164  0  2   91   36   184 0.950  13.19
 4.05 Intr - 119727 119569  159  1  0    2   92    86 0.014   0.36
 4.04 Intr - 135522 135474   49  0  1  108   83    35 0.048   3.25
 4.03 Intr - 137867 137789   79  1  1   70   87    44 0.088   2.05
 4.02 Intr - 144153 144062   92  0  2   53   73    66 0.007   0.39
 4.01 Init - 166442 166383   60  2  0   71  110     6 0.143   2.35
 4.00 Prom - 178813 178774   40                              -2.26

 5.08 PlyA - 180377 180372    6                               1.05
 5.07 Term - 187605 187429  177  0  0  100   55   106 0.822   6.19
 5.06 Intr - 192846 191975  872  1  2  107   -3   457 0.320  29.56
 5.05 Intr - 193450 193331  120  2  0   41   94    50 0.665   1.37
 5.04 Intr - 194117 193988  130  2  1   77   47   125 0.937   7.57
 5.03 Intr - 195069 194909  161  1  2  108   72    61 0.668   6.21
 5.02 Intr - 195764 195470  295  2  1   54   44   242 0.816  12.98
 5.01 Init - 196743 196342  402  0  0   66   68   310 0.914  23.43
 5.00 Prom - 199597 199558   40                              -4.56

 6.05 PlyA - 200741 200736    6                               1.05
 6.04 Term - 201324 201271   54  0  0  115   49    17 0.161  -1.94
 6.03 Intr - 208801 208676  126  1  0   95   66    21 0.117   1.48
 6.02 Intr - 214523 214359  165  2  0   52   61    73 0.188   1.16
 6.01 Intr - 216075 216024   52  2  1   96   75    74 0.650   5.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  37190  37051  140  0  2   92   43    96 0.917   3.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:123534146_123753801|GENSCAN_predicted_peptide_1|404_aa
MYGKNGHQEKMSIDVNNPHRRILKNARVADQGAGLLTRSALCLQDHSGDKDEEESQAKWC
SGHRVCSGRGGTASNSNRSTPACSPILRKRSRSPTPQNQDGDTMVEKGSDHSSDKSPSTP
EQGVQRSCSSQSGRSGGKNSKVSGTPLRRYLLVRGCGERYWGGEPENICEGPHVMNSPDG
SETVIIQAFGTHFRECRTTGIECASGQSSGTPAHSGQARGLLWTWLEGGPIFPVAPQWQQ
KSQSWYNNLLVHPGACLPDLQLALGTCHAICILWTLGVTVCTDQVEVLSPTYKQRNEDFR
KLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSM
TKEKTARLIPNAIQVCTDSEKIWILGQLLNSTQLYHGYLGLENM

>gi568815587r:123534146_123753801|GENSCAN_predicted_CDS_1|1215_bp
atgtatgggaaaaatgggcaccaagaaaagatgtccatagatgtgaataatccacatcgt
aggattctgaaaaatgcacgggtagctgatcagggagctggcttgctgacaaggtctgcc
ttgtgcctgcaggaccacagtggggataaggatgaggaagaaagccaagcaaagtggtgt
agcggccaccgtgtctgcagtgggcgtgggggcactgccagtaactccaaccgcagcacg
ccggcctgctcgcccatcctccggaagcggtctcgctcgccaaccccgcagaaccaggac
ggagacaccatggtggagaagggctcagatcactcctcggacaagtccccgtccacaccg
gagcagggcgtgcagcgcagctgctcctcccagtccggccggagcggcggcaagaattcc
aaggtgagcgggaccccgttgaggcggtacctccttgtcaggggctgcggggagcgatat
tggggtggtgagccggagaacatctgcgagggtcctcacgtgatgaacagccctgatggc
tcagagacagtcattatccaagcctttgggactcatttccgggaatgcagaaccacgggg
attgaatgtgcctctgggcagagttcagggacccctgcccacagtggacaggctcggggg
ctgctttggacgtggctggaggggggacccatttttcctgtggcccctcagtggcagcag
aaaagccagagttggtataataatctgcttgtccacccaggggcctgcctcccggacctc
cagctggccctgggcacctgccatgccatctgcatcctctggacccttggggtgactgtc
tgcactgaccaggtggaggtgttaagccccacctacaagcagagaaatgaagacttcaga
aagctctttaagcagcttccagacacggagcgcctcattgttgattactcatgtgcactc
caaagagacattctccttcagggccgactctacctctctgaaaattggatctgcttctac
agcaacatcttccgctgggaaactctgctgacagtccgtttgaaagacatctgttccatg
actaaagaaaaaacagctcgcctcattcccaatgccatccaagtttgcactgattcagaa
aagatttggatcctggggcagctgctcaactctacccaactctaccatggctacctgggc
ttggagaacatgtga

>gi568815587r:123534146_123753801|GENSCAN_predicted_peptide_2|311_aa
METILEQQQCYHEEKEWLMDVMAKEMLTKKSMLWDQINSDHCTRATQDRYMEVSGNPRDL
YDDKDGLRKEELGAISGPKEFSDFCNRLKQIKEFHRKHPNEIYVAMSVEFEELLKARENP
SEEAQNSVEFTDEEGYGRYLDLHDCCLKYINLKASEKLDYITYLSILDQLFDIPKDRRNA
EHKRYLEMLLEYLQDYTDRVKPLQDQNELSGKIQAEFEKKWENGIFPGWPKETSSALTQA
GAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGRIPEERAQRLFSTKGKSLESLDTSL
FAKNPKSKGTK

>gi568815587r:123534146_123753801|GENSCAN_predicted_CDS_2|936_bp
atggagacaatactggagcagcagcagtgctatcatgaggagaaggaatggctcatggat
gtcatggccaaagagatgctcactaaaaagtccatgctctgggaccagatcaattctgat
cactgcactcgggccacgcaagataggtatatggaggtcagtgggaacccaagggatttg
tatgatgataaggatggattacgaaaggaggagctcggtgccatttcaggacccaaggaa
ttttctgatttctgtaacagactcaagcaaataaaggaattccaccggaagcacccaaat
gagatctatgtggcaatgtcagtggaatttgaggagctcctgaaggctcgagagaatcca
agtgaagaggcacaaaactcggtggagttcacagatgaagagggatatggtcgttacctc
gatctccatgactgttgcctcaagtacattaacctgaaggcatctgagaagctggattat
atcacatacctgtccatcttagaccaattatttgacattcctaaagacaggaggaatgca
gagcataagagatacctagagatgctgcttgagtaccttcaggattacacagatagagtg
aagcctctccaagatcagaatgaactttctgggaagattcaggctgaatttgagaagaaa
tgggagaatgggatctttcctggatggccgaaagagacaagcagtgctctgacgcaggct
ggagcccatcttgacctctctgcattctcctcctgggaggagttggcctctctgggtttg
gacagattgaaatccgctctcttagctttaggactgaaatgtggcaggatcccagaagag
cgagcccagagactattcagcaccaaaggaaagtccctagagtcacttgatacctctttg
tttgccaaaaatcccaagtcaaagggcaccaagtaa

>gi568815587r:123534146_123753801|GENSCAN_predicted_peptide_3|560_aa
MGLCHSVLDLFHKSKRVGGPEGARLSRSFSPLKPLCPKELWHFVHQCYGNELGLTSDDED
YVPPDDDFNTMGYCEEIPVEENEVNDSSSKSSIETKPDASPQLPKKSITNSTLTSTGSSE
APVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPSLDFNDNEDIPTELSD
SSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTNSPFQRDFMEQRRFSDIIFH
PWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPY
HDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESE
LAKTESTYLAEMHRQSPKEKASKTTTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHR
IKHVAGSTQTRHIPEDTPNGFHLQSVSKLLLVISCVLVLLVILNMMLFYKLWMLEYTTQT
LTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQ
NGIRSRDYTSESEEKRNRYH

>gi568815587r:123534146_123753801|GENSCAN_predicted_CDS_3|1683_bp
atgggtttatgccactcagtgctggaccttttccataagagcaaaagagtcgggggacct
gagggagcaaggctcagtcgttccttttctcccctgaagcctctgtgtcccaaggagctc
tggcactttgttcaccagtgctatgggaacgaattgggcctgaccagtgatgacgaggac
tacgtgccccctgacgacgacttcaacacaatgggatactgtgaagagatccctgtggaa
gagaatgaagtgaatgacagctcatccaagagcagcatagagaccaagccagatgccagt
ccacagctgcccaagaaatccatcaccaacagcacactaacatccacagggagcagtgag
gcccccgtctcgtttgatgggctgcccctggaggaagaggcgctggagggagacgggtcc
ctggaaaaggagctcgccattgacaacatcatgggggagaagattgagatgatcgctcct
gtgaactccccttcactggacttcaatgacaatgaggacatccccactgagctcagtgac
tcttccgacacacacgatgaaggagaggtccaggccttctatgaggacctgagtggccgg
cagtacgtgaatgaagtcttcaacttcagcgtggacaagctctatgacctcctcttcacc
aactcgcccttccagcgggatttcatggagcagcggcgcttctctgatatcatcttccat
ccatggaaaaaggaggagaatggaaaccagagccgagtgattctttacaccatcaccctt
accaaccctctggctcccaaaactgccactgtcagggagacacagaccatgtacaaggcg
agccaggagagtgaatgttacgtgatagatgccgaagtcctcacccacgacgtgccctac
catgactacttctacacaatcaatcgctacacgctcacccgtgtggctcggaacaagagc
cgactcagggtctccacagagctgcgctatcgaaaacagccctgggggttagtgaaaacg
ttcatcgagaagaacttctggagtgggctggaggactacttccgccatttagagagcgag
ctggccaaaacggagagcacttatttggctgagatgcacagacaatctcccaaagagaag
gccagcaagactacaacggtgcggaggaggaagcgtccccatgcccacctgcgagtccct
cacctggaagaggtgatgagcccggtcaccacgcccacagatgaggatgtgggccacagg
atcaaacatgtggcaggttccacacagacgcggcatatcccggaggacacccccaacggt
ttccacctgcagagcgtgtccaagctgctgctggttatcagctgtgttctggtgctgctg
gtcatccttaacatgatgctcttctacaaactctggatgttggaatacaccacgcagacc
ctcactgcctggcagggtctaaggctccaagaaaggttaccccagtctcagacagaatgg
gcccagctcttagagtcccaacaaaagtaccacgatactgagctccaaaaatggagggaa
atcatcaaatcctcagtgatgctccttgaccagatgaaggactcgctcatcaaccttcag
aacggcatcaggtcccgcgactacacgtcggaaagtgaagaaaagaggaatcgctatcat
tga

>gi568815587r:123534146_123753801|GENSCAN_predicted_peptide_4|343_aa
MPSLITLIQHTVGSSGQGNQPGAAVGHRGPQSGGQAECRAEEGQNHLRPTRGSQQADKNS
NSQIKVKMTPSLWAEGQRTAKHPITFNPVQQNIQSERAQSLTEGISLCSLGSRQPQKMPA
FNRLFPLASLVLIYWGKYQHLAMPDAVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKRE
EVEATTVVEWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTL
NDSGLYTCNVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLW
LLIEMIYCYRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE

>gi568815587r:123534146_123753801|GENSCAN_predicted_CDS_4|1032_bp
atgccctctctcatcactcttattcaacatactgttggaagttctggccagggcaatcag
cctggagctgctgttggtcatcggggcccacagtctggaggacaagctgaatgcagagca
gaggagggccagaaccacctaagacccacaagagggagccaacaggctgacaagaacagc
aattcccagatcaaggtcaaaatgacaccatcgctgtgggcagaagggcagagaactgcc
aaacatccaataactttcaatccagtccagcaaaacatacaatctgagagggcgcagtcc
ttgaccgagggaatctctctgtgtagccttggaagccgccagccccagaagatgcctgcc
ttcaatagattgtttcccctggcttctctcgtgcttatctactggggtaagtaccagcac
ctcgccatgccggatgcagtcagtgtctgcttccctgtgtgtgtggaagtgccctcggag
acggaggccgtgcagggcaaccccatgaagctgcgctgcatctcctgcatgaagagagag
gaggtggaggccaccacggtggtggaatggttctacaggcccgagggcggtaaagatttc
cttatttacgagtatcggaatggccaccaggaggtggagagcccctttcaggggcgcctg
cagtggaatggcagcaaggacctgcaggacgtgtccatcactgtgctcaacgtcactctg
aacgactctggcctctacacctgcaatgtgtcccgggagtttgagtttgaggcgcatcgg
ccctttgtgaagacgacgcggctgatccccctaagagtcaccgaggaggctggagaggac
ttcacctctgtggtctcagaaatcatgatgtacatccttctggtcttcctcaccttgtgg
ctgctcatcgagatgatatattgctacagaaaggtctcaaaagccgaagaggcagcccaa
gaaaacgcgtctgactaccttgccatcccatctgagaacaaggagaactctgcggtacca
gtggaggaatag

>gi568815587r:123534146_123753801|GENSCAN_predicted_peptide_5|718_aa
MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASP
REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL
VEGLQKQPRRPRRWASSPKISSRDNQELPPDSMVTGSWNYSQVTVHVHGQEVLSEETVHL
GVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPHQEEELQTLQESEVPVPEDP
DLPAERSSGDSEMVALLTALSQVCPSYLCTTENLFEEPLGISHTKQGLVTFKDVAVCFSQ
DQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFPIPRPDEISQVREEEPWVPDIQEPQETQE
PEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEIHQTPDWEIVFEDNPGRLNER
RFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTCNSHLVRHLRTHTGEKPYKCM
ECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPVTQAERTPSVEKPYRCDDCGK
HFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQRIHLGGKPYLCGECGEDFSE
HRRYLAHRKTHAAEELYLCSECGRCFTHSAAFAKHLRGHASVRPCRCNECGKSFSRRDHL
LYISPRQVQGTTNEKISGRGLQQLLGAWVHLRNLGNRSTEKQFHGKRAVGQLNNPSKQ

>gi568815587r:123534146_123753801|GENSCAN_predicted_CDS_5|2157_bp
atggctacagccgtggaaccagaggaccaggatctttgggaagaagagggaattctgatg
gtgaaactggaagatgatttcacctgtcggccagagtctgtcttacagagggatgacccg
gtgctggaaacctcccaccagaacttccgacgcttccgctaccaggaggcagcaagccct
agagaagctctcatcagactccgagaactttgtcaccagtggctgagaccagagaggcgg
acaaaggagcagatcctagagctgcttgtgctggaacaatttcttaccgtcctacctgga
gaactacagagctgggtgcggggccaacggccagaaagtggcgaggaggcagtgacgctg
gtggagggtttgcagaaacaacccaggagaccaaggcggtgggcatcttctcctaaaata
agctcccgtgacaaccaagaacttcctcctgactccatggtgactggaagttggaattat
tcccaggtgactgtccatgttcacggccaggaagtcctgtcagaggagacggtgcattta
ggagtggagcctgagtcacctaatgagctgcaggatcctgtgcaaagctcgacccccgag
cagtctcctgaggaaaccacacagagcccagatctgggggcaccggcagagcagcgtcca
caccaggaagaggagctccagaccctgcaggagagcgaggtcccagtgcccgaggaccca
gaccttcctgcagagaggagctctggagactcagagatggttgctcttcttactgctctg
tcacaggtgtgccctagttacctctgtaccacagagaatttgtttgaagaaccactgggc
ataagccatactaaacagggactggtaacgttcaaggatgtggccgtatgcttttcccag
gaccagtggagtgatctggacccaacacagaaagagttctatggagaatatgtcttggaa
gaagactgtggaattgttgtctctctgtcatttccaatccccagacctgatgagatctcc
caggttagagaggaagagccttgggtcccagatatccaagagcctcaggagactcaagag
ccagaaatcctgagttttacctacacaggagataggagtaaagatgaggaagagtgtctg
gagcaggaagatctgagtttggaggatatacacaggcctgttttgggagaaccagaaatt
caccagactccagattgggaaatagtctttgaggacaatccaggtagacttaatgaaaga
agatttggtactaatatttctcaagtgaatagttttgtgaaccttcgggaaactacaccc
gtccaccccctgttagggaggcatcatgactgttctgtgtgtggaaagagcttcacttgt
aactcccaccttgttagacacctgaggactcacacaggagagaaaccctataaatgtatg
gaatgtggaaaaagttacacacgaagctcacatcttgccaggcaccaaaaggttcacaag
atgaacgcgccttacaaatatcccctaaaccggaagaatttggaagagacctcccctgtg
acacaggctgagagaactccatcagtggagaaaccctatagatgtgatgattgcggaaag
cacttccgctggacttcagaccttgtcagacatcagaggacacatactggagaaaaaccc
ttcttttgtactatttgtggcaaaagcttcagccagaaatctgtgttaacaacacaccaa
agaatccacctgggaggcaaaccctacttgtgtggagagtgtggtgaggacttcagtgaa
cacaggcggtacctggcgcaccggaagacgcacgctgctgaggaactctacctctgcagc
gagtgcgggcgctgcttcacccacagcgcagcgttcgccaagcacttgagaggacacgcc
tcagtgaggccctgccgatgcaacgaatgtgggaagagcttcagtcgcagggaccacctc
ttgtacatctctcctagacaagtccaaggaactactaacgagaagatttcaggaagaggc
ctacagcaattgcttggtgcttgggttcatttgcggaatcttggcaacaggtctacagag
aagcagttccacggcaaaagagctgtggggcagttgaataatccatccaaacaatga

>gi568815587r:123534146_123753801|GENSCAN_predicted_peptide_6|132_aa
XGGKDMKEIVGSLQCPEKHYSTIAKTWNQPKYPSMVDWIKKMWYIYTMEYYAATKKNDIM
SSAAKWMELEAIITPAPQSLSSSQAFSFRLNYTTNLLISPACSKQMVGLLNVHNYAAKVN
AKQAPEISACDF

>gi568815587r:123534146_123753801|GENSCAN_predicted_CDS_6|399_bp
nngggaggcaaagacatgaaggagattgtgggcagcctccagtgtccagagaagcactat
tccacaatagcaaagacatggaatcaacctaaatacccctcaatggtggactggataaag
aaaatgtggtacatatataccatggaatactatgcagccacaaaaaagaatgacatcatg
tcttctgcagcaaaatggatggagctggaagccattattacaccagcacctcaatccctt
tccagttctcaggccttcagctttagactgaattataccaccaacctccttatttctcca
gcttgcagtaagcagatggtgggacttctcaacgtccataattatgctgccaaagtaaat
gcaaaacaagcaccagaaatctcagcttgtgatttctga