GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:09:43

Sequence gi568815584f:76054364_76273694 : 219331 bp : 43.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   3689   3908  220  2  1   82   42   146 0.508   5.91
 1.02 PlyA +   4161   4166    6                               1.05

 2.00 Prom +   8789   8828   40                              -3.96
 2.01 Init +  17225  17334  110  1  2   78   89    50 0.748   3.79
 2.02 Intr +  20788  20925  138  1  0  122   67    29 0.403   3.78
 2.03 Intr +  22234  22328   95  1  2   44   96    46 0.686   0.61
 2.04 Intr +  27932  28004   73  0  1  108   96    59 0.997   7.16
 2.05 Intr +  28254  28329   76  0  1  111  105   134 0.997  16.92
 2.06 Intr +  28864  28926   63  0  0  124   77    91 0.985  10.51
 2.07 Term +  29095  29214  120  0  0   61   52    52 0.325  -2.63
 2.08 PlyA +  29310  29315    6                               1.05

 3.04 PlyA -  30633  30628    6                               1.05
 3.03 Term -  37492  37407   86  2  2   99   43    70 0.605   1.42
 3.02 Intr -  40853  40784   70  2  1   64  100    67 0.338   4.25
 3.01 Init -  44843  44724  120  2  0   17   96   117 0.301   4.17
 3.00 Prom -  49816  49777   40                              -5.26

 4.08 PlyA -  52362  52357    6                               1.05
 4.07 Term -  59036  58949   88  1  1   82   54   113 0.700   4.43
 4.06 Intr -  59812  59668  145  2  1   67   70    50 0.030   0.44
 4.05 Intr -  63596  63455  142  2  1   82   24    60 0.009  -1.07
 4.04 Intr -  71716  71614  103  0  1  107   48    71 0.598   5.18
 4.03 Intr -  72053  71966   88  0  1  100   53    34 0.683   0.13
 4.02 Intr -  76745  76654   92  1  2   89   84    38 0.740   3.14
 4.01 Init -  79982  79936   47  2  2  100   90    24 0.762   4.20
 4.00 Prom -  81381  81342   40                              -4.66

 5.00 Prom +  86459  86498   40                              -1.76
 5.01 Init + 100001 100662  662  1  2   69   81   674 0.573  59.53
 5.02 Intr + 112300 112364   65  1  2  103   90    31 0.395   3.16
 5.03 Intr + 117480 117656  177  1  0   69  105    69 0.865   6.59
 5.04 Intr + 123529 123568   40  2  1   79  110    22 0.195   0.78
 5.05 Intr + 141515 141609   95  2  2   84   60    74 0.050   3.81
 5.06 Intr + 148074 148165   92  1  2   78   33    74 0.511   0.61
 5.07 Term + 152580 152636   57  2  0   72   43    79 0.280  -0.51
 5.08 PlyA + 152964 152969    6                               1.05

 6.05 PlyA - 153498 153493    6                               1.05
 6.04 Term - 174287 174250   38  0  2  111   53    62 0.266   2.50
 6.03 Intr - 181505 181454   52  2  1   74  100     8 0.229  -0.92
 6.02 Intr - 184643 184476  168  2  0   62   72    91 0.731   5.04
 6.01 Init - 184871 184785   87  2  0   50   94    45 0.700   1.94
 6.00 Prom - 185632 185593   40                              -6.06

 7.00 Prom + 186929 186968   40                              -3.56
 7.01 Init + 192332 192392   61  1  1   72   54    55 0.244   1.91
 7.02 Intr + 195073 195166   94  2  1   90   84    38 0.398   2.62
 7.03 Intr + 197688 197745   58  0  1   45  115    25 0.050  -0.21
 7.04 Intr + 202090 202176   87  0  0   80   48    48 0.008   0.17
 7.05 Intr + 209737 209790   54  0  0   93  100    36 0.017   4.48
 7.06 Term + 210322 210465  144  0  0   96   48   142 0.038   8.91
 7.07 PlyA + 211880 211885    6                               1.05

 8.03 PlyA - 212722 212717    6                               1.05
 8.02 Term - 213394 213342   53  2  2   76   44    39 0.415  -4.11
 8.01 Init - 213922 213787  136  1  1   69   41   153 0.412   9.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 146607 146652   46  2  1   86  123    12 0.932   5.35
S.002 Init - 210432 210300  133  0  1   89   69   190 0.890  15.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_1|73_aa
XPRGWFLCTLTCENHYHRYACISQALSLLTHHHSEGPLVLRVKGTEKQFQSLKPELRGED
IPFCSLQVASADS

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_1|222_bp
nngccccgcggatggttcttatgcaccctgacgtgtgagaaccactaccatagatacgcg
tgtatcagccaggccctgtcactcctcacccaccatcactcagaaggtcctctcgtcctt
cgtgtgaagggcacagaaaagcagttccaaagtctgaagcctgaactgcgaggcgaggac
atccctttttgctcgttgcaagtcgcaagtgctgacagctaa

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_2|224_aa
MGSSTITRSLLPPYRYTIGTHSLKITDNRKTVKFRKWATRMLRMVSPVPHLLQHGSVATV
AVFRLFFSYLPVTSTALDPALISGTQTGKQQLDLNACYHKTHHRDLGLASLEEADIPIIP
DLEEVQEEDFVLQVAAPPSIQIKRVMTYRDLDNDLMKYSAIQTLDGEIDLKLLTKVLAPE
HEVREDDVGWDWDHLFTEVSSEVLTEWDPLQTEKEDPAGQARHT

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_2|675_bp
atgggcagcagcaccatcacacggtctttacttcctccatacaggtacacgataggcaca
catagcctcaagatcacagataataggaaaacagtaaaattcaggaagtgggccacacgc
atgctgcgtatggtcagtcctgttccacaccttttgcagcatggctccgtagccactgtc
gcagttttcagactctttttctcctacctgccagtaacgagcacagccctggacccagct
ctaatcagcggtacccaaacaggcaaacaacagctggatctgaacgcatgctatcacaaa
acgcatcacagagatttggggctggcttcattggaagaggcagatattcctatcattccg
gatctggaggaagtacaggaagaagactttgttttgcaggtggcagcccctcccagcatc
cagataaagcgggtgatgacctaccgtgacctggacaatgacctcatgaagtactcagcc
attcagacactggatggggagatcgacctgaaactcctcaccaaagtgctcgcgccggag
cacgaagtccgggaggatgatgtcggctgggactgggaccatctgttcactgaggtgtcc
tcagaggtcctcactgagtgggacccactgcagacggagaaggaggaccctgcggggcag
gccaggcacacctga

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_3|91_aa
MCAAALGLPERGAGGCCTCRALSLHPTEGSRRRRVQLRWQTQGKQLSGPLKGGQKENLMS
LVQGLLSWVGFHIGAYLNERGICYWRPTGDP

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_3|276_bp
atgtgtgcagcagccctggggttaccggagagaggggctggcggctgctgcacctgccgg
gctctgtcgctgcaccccactgagggctcccggaggcgccgcgtgcagctgcgatggcag
actcaaggaaaacaacttagtggcccacttaaaggtggtcagaaggaaaacctgatgtcc
ttggtgcaaggccttctcagttgggttggattccacattggtgcttacctgaatgaaaga
gggatctgctactggcgccccaccggggatccctga

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_4|234_aa
MDGKPPLRRYRFISARIPCRGQRDVHWATCPHQMQSLEEMRVDESQGLFSPYDFSSRMTQ
TSLYGDLELQERKQKLLCAEGFGEHLIEWRVLLSSEATDAAGSLGALTSPGVPLIKMNGL
PRRSLGPHGWQPAGDSSPQLEQFICCNYWQDNTVEGSVASRETLNDTVLKEDMGCGQERD
SLTYIALTTLIIITKALPVEYPLRTSSPVWASDMIPDSQGAAKNLLEKVSSQRA

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_4|705_bp
atggacgggaagcctccgctgaggagatatcgcttcatttcggcaaggatcccctgcagg
ggccagagggatgttcactgggcaacgtgtcctcaccaaatgcagagtttggaagagatg
cgagtggatgagagccagggtcttttctcgccatatgacttctctagtaggatgacccag
acctctttatatggagacttagaactccaagaaagaaagcagaagttgctttgtgcagag
ggctttggggaacatctcattgaatggagggtgctgctctccagtgaggccacagatgct
gctgggtcccttggtgctctaacttcacctggtgtacctcttattaaaatgaatggactc
ccacggcgcagcctggggccgcatggctggcagccagccggggacagcagccctcaactg
gagcagtttatctgctgtaattactggcaggacaacacagtggagggttctgtggcttca
agggaaaccttgaacgacacagttttgaaggaggatatgggctgtggtcaagaaagagac
agtctcacctacattgcattgacgaccttgataataataacaaaggcactgcctgttgag
taccccctacgaaccagctccccagtctgggcctccgacatgatcccagacagccaggga
gcagccaagaacctgctggaaaaagtcagctcccaacgagcctga

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_5|395_aa
MDELVHDLASALEQTSEQNKLGELWEEMALSPRQQRRQLRKRRGRKRRSDFTHLAEHTCC
YSEASESSLDEATKDCREVAPVTNFSDSDDTMVAKRHPALNAIVKSKQHSWHESDSFTEN
APCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSS
GHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENMSECETSSVCSSSDTGLFTNDEG
RQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVERMDSGLDKFSDSTFLLPSRPAQ
RVSGYHQLGKENEIRQANVHWGPPCSRDIKRKRKPVATASLSSPSADCLQKLRQLISSSS
CIVFYLIFRVYVLLKEDLLKDLFEELTKDAIKGYV

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_5|1188_bp
atggatgagctggtacacgacttagcctcagccttggagcagacatctgagcagaataag
cttggtgaactgtgggaggagatggcgctgagcccccgacagcagaggcggcagcttcgg
aaacgccgaggtcggaagcgtcgttctgacttcactcacctggcagagcatacctgctgc
tacagcgaggcctctgagtcaagtctggatgaggccactaaggactgtcgagaagtggct
ccggtgaccaattttagtgactctgatgacacaatggtagccaaacgacacccagctctc
aatgccattgtcaagagtaagcaacattcttggcatgaatctgactcctttactgaaaat
gcaccttgtcgaccactcaggcgcaggcggaaggtgaagcgagtgacatcagaggtggct
gctagccttcagcagaagctgaaggtgtcagattggagctatgagagaggctgcaggttc
aagtctgctaagaagcagcgtctgtcccgctggaaggagaatactccctggacctcatca
ggccacggattgtgtgaatcagcagaaaataggactttcctaagcaaaacaggaaggaaa
gaaaggatggagtgtgaaacagatgaacaaaaacagggctctgatgagaacatgtcagaa
tgtgaaaccagcagtgtgtgtagcagcagtgacactgggctctttaccaatgatgaaggg
cgacaaggtgatgacgaacagagtgattggttctatgaaggagaatgtgtcccaggattc
actgtccctaatcttctgcccaagtgggctcctgatcattgttctgaagtagaaagaatg
gattctggattggataaattttcagattccacattccttttaccttctcggccagctcaa
agagtttctggttaccatcagctgggaaaagagaacgaaatcagacaggcaaatgtacac
tggggaccaccatgttcacgtgacatcaagaggaagcggaaaccagtggccacagcatct
ttgtctagccccagtgcagattgtctgcagaaactcagacagctcatcagcagcagcagc
tgtattgtattttacctcatcttcagagtttatgttctactgaaagaggacctcctgaaa
gatctttttgaagaattgacaaaggatgctatcaagggctatgtttag

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_6|114_aa
MKIVEKFNTGQYRMRMLVKSKYLLPHDSHDGLRERKGSFFRTVVLHDTKTDSNSDTETNS
STPPRTLLEMQILSPTWTYEISSSRKVTLRPVWAGCKEIMGEGIYSNETVYGLC

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_6|345_bp
atgaaaatcgtggaaaaattcaacactggtcagtatagaatgcgcatgctcgtaaagtct
aaatatttgcttcctcatgactcccacgatggtttaagggaaaggaaaggaagtttcttt
agaacagtggttctccatgataccaagactgacagcaacagcgacactgagaccaacagc
agcacaccacctagaaccctgttagaaatgcaaattctcagtcccacctggacctatgaa
atcagcagctctaggaaagtcaccctaaggccagtgtgggcaggctgcaaggagatcatg
ggggaaggaatttatagcaacgaaacagtctacgggctgtgctga

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_7|165_aa
MTTLENLTDSKRTLVTEDALDGAFYLFLTTLFTGKESKKDYELFSVIDFLKGWSLLVKAK
EQVGVLKMKWMCLAHNICKYLLDERASSTGFCGFAIMEGPVVRLLLAKDRQRREDGGKAR
HHDAKCGLLIKDSIESWSLCGESSSVGSEPDLRRHGYRQFCCDSP

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_7|498_bp
atgacaacgcttgaaaacctgactgactctaagagaacactggtgactgaagatgcactt
gacggagctttctacttgtttctgaccacactatttactggtaaagaatccaagaaagat
tatgaattatttagtgttattgacttcctaaaaggctggtcattgttggtgaaagctaag
gagcaagtaggagttctcaagatgaaatggatgtgcttggcacataatatatgcaaatac
ttgttggatgaaagggcctctagtactggtttctgtggatttgccatcatggaaggccct
gtggtccggctgctgctggctaaggacaggcagaggagggaggatggaggaaaggccaga
caccacgatgccaaatgcgggctgctcatcaaagactccattgagagctggtcgctgtgt
ggggaaagcagcagtgttggctccgaacctgacctgaggaggcatggctaccgtcagttc
tgttgtgacagcccttga

>gi568815584f:76054364_76273694|GENSCAN_predicted_peptide_8|62_aa
MKLLARTPHEQKDGCGTSRKQRCSSNDSSRIPLRRAQEGGGSKVDGGEQFPGNETRPEER
RA

>gi568815584f:76054364_76273694|GENSCAN_predicted_CDS_8|189_bp
atgaagctgctggcccgtactccgcatgaacagaaggacggctgtgggacctctagaaaa
cagcggtgttcctccaacgacagttctagaattcctctaagacgagcacaggaaggtgga
ggttccaaggtggacggaggggagcagtttcctggaaatgaaactcgtccagaggaacgt
agggcctag