GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:44:54

Sequence gi568815591f:94564609_94765590 : 200982 bp : 36.95% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -    881    778  104  2  2   63  103   114 0.189   8.45
 1.01 Init -  10040   9699  342  2  0   48   29   240 0.162  11.38
 1.00 Prom -  13198  13159   40                              -6.15

 2.10 PlyA -  13669  13664    6                               1.05
 2.09 Term -  19766  19658  109  1  1   77   41    77 0.057  -1.10
 2.08 Intr -  34355  34167  189  1  0   57   92   106 0.332   5.68
 2.07 Intr -  36249  36038  212  0  2   67   67   134 0.952   5.99
 2.06 Intr -  38844  38682  163  2  1   60  111   107 0.787   9.26
 2.05 Intr -  54348  54150  199  1  1   23   86   144 0.159   5.19
 2.04 Intr -  61401  61257  145  0  1   25   87    90 0.876   1.53
 2.03 Intr -  63751  63594  158  2  2   97   76    90 0.977   7.51
 2.02 Intr -  65233  65111  123  2  0  120   84    66 0.984   9.04
 2.01 Init -  74754  74733   22  0  1   77  101    12 0.344   1.43
 2.00 Prom -  80111  80072   40                              -4.45

 3.00 Prom +  85301  85340   40                              -5.05
 3.01 Sngl +  92064  92357  294  2  0   58   45   327 0.613  20.85
 3.02 PlyA +  92719  92724    6                               1.05

 4.00 Prom +  95121  95160   40                              -6.05
 4.01 Init +  98949  99852  904  2  1  102   28  1230 0.797 112.82
 4.02 Term +  99882 101074 1193  1  2   33   36  1136 0.906  93.79
 4.03 PlyA + 101296 101301    6                               1.05

 5.04 PlyA - 103689 103684    6                               1.05
 5.03 Term - 114745 114574  172  0  1   64   47   152 0.914   5.02
 5.02 Intr - 123721 123544  178  2  1   46   59   130 0.611   3.96
 5.01 Init - 124741 124672   70  1  1   25   42   100 0.475   0.36
 5.00 Prom - 129104 129065   40                              -3.15

 6.03 PlyA - 129219 129214    6                               1.05
 6.02 Term - 130573 130417  157  0  1   46   39   215 0.994   8.82
 6.01 Init - 131209 131007  203  1  2   98   81   119 0.762  10.60
 6.00 Prom - 133085 133046   40                              -8.35

 7.00 Prom + 135480 135519   40                              -5.55
 7.01 Init + 135813 135925  113  2  2   55    8    79 0.489  -3.67
 7.02 Term + 140876 141386  511  2  1   12   41   515 0.758  32.06
 7.03 PlyA + 141690 141695    6                               1.05

 8.02 PlyA - 143052 143047    6                               1.05
 8.01 Sngl - 159512 159108  405  2  0   43   28   356 0.727  21.13
 8.00 Prom - 162833 162794   40                              -3.45

 9.03 PlyA - 162898 162893    6                              -0.45
 9.02 Term - 163227 163084  144  0  0   23   43   119 0.445  -2.17
 9.01 Init - 164043 163897  147  0  0   74   68   144 0.894  11.14
 9.00 Prom - 166631 166592   40                              -7.75

10.00 Prom + 170272 170311   40                              -1.95
10.01 Init + 171901 171997   97  0  1   62   82    76 0.684   4.92
10.02 Intr + 174443 174609  167  0  2   29   98    70 0.507   0.86
10.03 Intr + 174646 174860  215  0  2   27   61   179 0.260   5.69
10.04 Term + 179379 179436   58  0  1   92   45    43 0.108  -3.42
10.05 PlyA + 180015 180020    6                               1.05

11.03 PlyA - 181093 181088    6                               1.05
11.02 Term - 181584 181552   33  0  0  108   44    19 0.153  -3.89
11.01 Init - 187365 187237  129  0  0   78   89    89 0.849   8.20
11.00 Prom - 187488 187449   40                              -3.65

12.02 PlyA - 188247 188242    6                               1.05
12.01 Sngl - 192152 191850  303  2  0   72   54   221 0.833  12.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  10040   9684  357  2  0   48   43   223 0.835   9.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_1|149_aa
MAASWTNKGEKREDPNKTIRNDDGNVTTDHKEIKLTIRNYYEYLYAHKLENVEEMDKFLD
TYILPRLNQKEIDSLNRLITSSKTESVISSLPTKKSPGPDGFTAKFYQMYKEELMEDEKL
KAVNRHKLSFTATGPFRTLTKRNYTFSGX

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_1|447_bp
atggctgctagctggactaataaaggagaaaagagagaagatccaaataaaacaatcaga
aatgatgatgggaatgttaccactgaccacaaagaaataaaactaaccatcagaaactac
tacgaatacctctatgcacacaaactagaaaatgtagaagagatggataaattcttggac
acatatatcctcccaagactgaatcagaaagaaattgattccctgaacagactaataaca
agctccaaaactgaatcagtaataagtagcctaccaaccaaaaaaagccctggacctgat
ggattcacagccaaattctaccagatgtacaaagaagagctgatggaggatgagaagctg
aaggcagttaacagacataagctaagttttacagccacaggaccttttaggacgcttaca
aagaggaactataccttcagtgggtgn

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_2|439_aa
MAAGMKDVYSIFSKVHSDRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDPITFNT
NLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEVDVGVGITTLESSTEYLIQ
LSIPVPYYLAVLLLAICPKEVLANALLEADFPLPYQAEFFIKNMNVEEMLASEVLGDFLG
AVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQ
LRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPS
DSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVIQLVHHSAIQKSTKELRDM
SKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQSNQLEIVNVLHQCHGL
GGMQCCQGSRGPDFGTDTE

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_2|1320_bp
atggctgctgggatgaaagatgtgtacagtattttctccaaggtacactccgatcggaat
gtatacccatcagcaggtgtcctctttgttcatgttttggaaagagaatattttaagggg
gaatttccaccttacccaaaacctggcgagattagtaatgatcccataacatttaataca
aatttaatgggttacccagaccgacctggatggcttcgatatatccaaaggacaccatat
agtgatggagtcctatatgggtccccaacagctgaaaatgtggggaagccaacaatcatt
gaggtggatgtgggagttggcatcactactttggaaagcagtactgaatatctcatacag
ttgagtatccctgtaccttattatctggcagtcctacttctagcaatatgccccaaagaa
gtacttgcaaatgccctcctggaggcagacttcccgttgccatatcaagcagaattcttc
attaagaatatgaatgtagaagaaatgttggccagtgaggttcttggagactttcttggc
gcagtgaaaaatgtgtggcagccagagcgcctgaacgccataaacatcacatcggcccta
gacaggggtggcagggtgccacttcccattaatgacctgaaggagggcgtttatgtcatg
gttggtgcagatgtcccgttttcttcttgtttacgagaagttgaaaatccacagaatcaa
ttgagatgtagtcaagaaatggagcctgtaataacatgtgataaaaaatttcgtactcaa
ttttacattgactggtgcaaaatttcattggttgataaaacaaagcaagtgtccacctat
caggaagtgattcgtggagaggggattttacctgatggtggagaatacaaacccccttct
gattctttgaaaagcagagactattacacggatttcctaattacactggctgtgccctcg
gcagtggcactggtcctttttctaatacttgcttatatcatgtgctgccgacgggaaggc
gtcatccaactggtccatcacagtgctattcagaaatctaccaaggagcttcgagacatg
tccaagaatagagagatagcatggcccctgtcaacgcttcctgtgttccaccctgtgact
ggggaaatcatacctcctttacacacagacaactatgatagcacaaacatgccattgatg
caaacgcagcagagtaatcagcttgagattgtaaatgtattgcatcagtgtcatggccta
ggaggaatgcaatgttgtcaaggctccagaggaccagattttggcacagacacagagtaa

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_3|97_aa
MSPRKTCHAFTGCTPKQMGKPSLKGLGFQDQVQIRAVDRDELRTVMSCRRSGAIDRFAIC
SSNALPSAMLYKQISASNALQTGASDALQARFTRATN

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_3|294_bp
atgtctccacgcaaaacttgtcacgccttcactggctgtaccccaaaacaaatggggaaa
ccaagccttaaaggcttgggtttccaggaccaagtccagatacgggctgtagacagagat
gagctgcggacagtgatgagctgcagacggtcaggagctatagatcgatttgcaatttgc
tcttcaaatgcgctaccaagtgccatgctttacaaacagataagcgcttcaaatgcgcta
caaactggcgcttcagatgcgctacaagcacgcttcacgcgggcgacaaactga

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_4|698_aa
MTERRRDELSEEINNLREKVMKQSEENNNLQSQVQKLTEENTTLREQVEPTPEDEDDDIE
LRGAAAAAAPPPPIEEECPEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDRVRVCF
VTSMMTGRAARWASAKLERSHYLMHNYPAFMMEMKHVFEDPQRREVAKRKIRRLRQGMGS
VIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQEELSHLEVAKSLSALIGQCIHIERR
LARAAAARKPRSPPRALVLPHIASHHQVDPTEPVGGARMRLTQEEKERRRKLNLCLYCGT
GGLKVFAGGKLPGPAVEGPSATGPEIIRSPQDDASSPHLQVMLQIHLPGRHTLFVRAMID
SGASGNFIDHEYVAQNGIPLRIKDWPILVEAIDGRPIASGPVVHETHDLIVDLGDHREVL
SFDVTQSPFFPVVLGVRWLSTHDPNITWSTRSIVFDSEYCRYHCRMYSPIPPSLPPPAPQ
PPLYYPVDGYRVYQPVRYYYVQNVYTPVDEHVYPDHRLVDPHIEMIPGAHSIPSGHVYSL
SEPEMAALRDFVARNVKDGLITPTIAPNGAQVLQVKRGWKLQVSYDCRAPNNFTIQNQYP
RLSIPNLEDQAHLATYTEFVPQIPGYQTYPTYAAYPTYPVGFAWYPVGRDGQGRSLYVPV
MITWNPHWYRQPPVPQYPPPQPPPPPPPPPPPPSYSTL

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_4|2097_bp
atgaccgaacgaagaagggacgagctctctgaagagatcaacaacttaagagagaaggtc
atgaagcagtcggaggagaacaacaacctgcagagccaggtgcagaagctcacagaggag
aacaccacccttcgagagcaagtggaacccacccctgaggatgaggatgatgacatcgag
ctccgcggtgctgcagcagctgctgccccaccccctccaatagaggaagagtgcccagaa
gacctcccagagaagttcgatggcaacccagacatgctggctcctttcatggcccagtgc
cagatcttcatggaaaagagcaccagggatttctcagttgatcgtgtccgtgtctgcttc
gtgacaagcatgatgaccggccgtgctgcccgttgggcctcagcaaagctggagcgctcc
cactacctgatgcacaactacccagctttcatgatggaaatgaagcatgtctttgaagac
cctcagaggcgagaggttgccaaacgcaagatcagacgcctgcgccaaggcatggggtct
gtcatcgactactccaatgctttccagatgattgcccaggacctggattggaacgagcct
gcgctgattgaccagtaccacgagggcctcagcgaccacattcaggaggagctctcccac
ctcgaggtcgccaagtcgctgtctgctctgattgggcagtgcattcacattgagagaagg
ctggccagggctgctgcagctcgcaagccacgctcgccaccccgggcgctggtgttgcct
cacattgcaagccaccaccaggtagatccaaccgagccggtgggaggtgcccgcatgcgc
ctgacgcaggaagaaaaagaaagacgcagaaagctgaacctgtgcctctactgtggaaca
ggaggcctcaaagtcttcgccggcgggaaactccccggccccgctgtagagggaccttca
gcgaccgggccagaaataataaggtccccacaagatgatgcctcatctccacacttgcaa
gtgatgctccagattcatcttccgggcagacacaccctgttcgtccgagccatgatcgat
tctggtgcttctggcaacttcattgatcacgaatatgttgctcaaaatggaattcctcta
agaatcaaggactggccaatacttgtggaagcaattgatgggcgccccatagcatcgggc
ccagttgtccacgaaactcacgacctgatagttgacctgggagatcaccgagaggtgctg
tcatttgatgtgactcagtctccattcttccctgtcgtcctaggggttcgctggctgagc
acacatgatcccaatatcacatggagcactcgatctatcgtctttgattctgaatactgc
cgctaccactgccggatgtattctccaataccaccatcgctcccaccaccagcaccacaa
ccgccactctattatccagtagatggatacagagtttaccaaccagtgaggtattactat
gtccagaatgtgtacactccagtagatgagcacgtctacccagatcaccgcctggttgac
cctcacatagaaatgatacctggagcacacagtattcccagtggacatgtgtattcactg
tccgaacctgaaatggcagctcttcgagattttgtggcaagaaatgtaaaagatgggcta
attactccaacgattgcacctaatggagcccaagttctccaggtgaagagggggtggaaa
ctgcaagtttcttatgattgccgagctccaaacaattttactatccagaatcagtatcct
cgcctatctattccaaatttagaagaccaagcacacctggcaacgtacactgaattcgta
cctcaaatacctggataccaaacataccccacatatgccgcgtacccgacctacccagta
ggattcgcctggtacccagtgggacgagacggacaaggaagatcactatatgtacctgtg
atgatcacttggaatccacactggtaccgccagcctccggtaccacagtacccgccgcca
cagccgccgcctccaccaccaccaccgccgccgcctccatcttacagtaccctgtaa

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_5|139_aa
MRTQLEDAKFEERNEPSPDTESAGITLAGPPEGTGGKPCGSICTMPPPQVHRVHELCGCG
YLQLDFKRCSGKPLCPDRELPQRKKKLTVKQPQADPLYSEEGTVIIGDDGFMHVIAPNDL
PVGHDVEAEDNVINAPDPV

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_5|420_bp
atgaggacacagctagaagatgctaaatttgaagaaaggaatgagccctcaccagacact
gaatctgctggtataactttggcgggccctccagaaggcacaggtggtaaaccatgtggc
agtatctgcacaatgccacctccacaggtccacagagttcatgaactgtgtggctgtggc
tatctccagctagatttcaaacgatgctctggaaagcctctgtgtccagacagagaactg
ccacagagaaaaaaaaagttaactgtaaagcagcctcaggcagatccattatattcagaa
gaaggcacagtaatcataggagatgacggcttcatgcatgttattgctcctaatgacctt
ccagtgggacatgatgtggaggcagaagacaatgttattaatgctcctgaccctgtgtag

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_6|119_aa
MAVGKNKCFMKGSKKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKTPSPGPKEPKLHLM
VSRVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_6|360_bp
atggcagttggcaagaacaagtgctttatgaaaggcagcaaaaagggagccaagaagaaa
gtgattgatcaattttctaagaaagattggtatgatgtgaaagcacttgctatgttcaat
ataagaaatattggaaagacgccatcaccaggacccaaggaaccaaaattgcatctgatg
gtctcaagggtcatgtgtttgaaaaaagtaaaaatgctgaagaagcccaagtttgaattg
ggaaagctcatggagcttcatggtgacagcagtagttctggaaaagccattggggatgag
acaggtgctaaagttgaacgagctgagggatatgaaccaccagtccaagaatctgtttaa

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_7|207_aa
MATTKTKTKTSVRRDVEKLESLHTVDGNAKSCSHYGKEEVWRERRQWEPGLREALAGQLE
FRVGVGLAALHSEQPAGPAAPGNEGLSTRVSGCRGCTGSPSSASPPALRSISHRALAAFL
PVRDRDLQPAMPEPPTPSMGSCAAQASPMSTTPCSTAPSPINHPRAEVCKCTARDWQAAP
PAAPVRDPLGEASWAPESGGDVENLHV

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_7|624_bp
atggctaccaccaaaacaaaaacaaaaacgagcgttagaagggatgtggagaaattggaa
tccttgcacacagttgatgggaatgcaaaatcatgcagccactatggaaaagaggaggtg
tggagggagaggcgccagtgggaacccgggctgcgcgaggcgcttgcgggccagctggag
ttccgggtgggcgtgggcttggcggccctgcactcggagcagccagctggccctgccgcc
ccgggcaatgaggggcttagcacccgggtcagcggctgcagagggtgtactgggtcgccc
agcagtgccagcccaccagcgctgcgctcaatttctcaccgggccttagctgccttcctg
ccggtcagggatcgggacctgcagcccgccatgcctgagcctcccaccccctccatgggc
tcctgtgcggcccaagcctccccgatgagcaccaccccctgctccacggcgcccagtccc
atcaaccacccaagggctgaggtgtgcaagtgcacggcacgggactggcaggcagctcca
cctgcagccccggtgcgggatccactgggtgaagccagctgggctcctgagtctggtggg
gacgtggagaaccttcatgtctag

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_8|134_aa
MLSAAEQHLQKPAAKTEAEQLVWWRDPITKSWEIGKIITWGRGFACVSPGQNRQPIWIPS
RHLKPYHEPDAEEEIPGGSQGPPGCSHVETDAEEDCSCHEQHPLNTATYLGTDQEAVADG
RRKPEESGTTSHNK

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_8|405_bp
atgctatcagcagctgaacagcatctacagaaaccagctgcaaagacagaagcagaacaa
ctggtttggtggagagatccaataacaaaaagttgggaaataggtaaaataataacttgg
ggtagaggttttgcttgtgtttcaccaggccaaaaccggcagccaatttggataccatca
agacacctgaaaccttatcatgagccagatgccgaagaagagattccaggaggatcccaa
ggaccccctggttgcagccatgttgagactgatgctgaggaggactgcagctgtcacgag
caacacccattgaacacagccacctacctggggacagatcaagaagctgttgcagatggc
agaagaaaacctgaggaaagcgggacaaccagtcacaataagtaa

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_9|96_aa
MEQVWALVHSTLEPLHSNDEEEGKYNEVTEEVTEQVFLPAKAKVAKEGEGPKEPYTGFIA
RLQESLKKVIADSAAQDIVLRLLAFNNANPECQAAL

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_9|291_bp
atggaacaagtgtgggctctggttcattccaccttggaacctttacatagtaatgatgag
gaagaaggaaagtataacgaggtaacagaagaggtgacagagcaggtttttttgccagct
aaagctaaagtggcaaaggagggagagggaccaaaagaaccatacacaggttttatagct
cggttacaggagtctcttaaaaaggtgattgcagattcagctgctcaggatatagtgttg
cggttattagctttcaacaatgctaatcctgagtgccaggctgctctgtga

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_10|178_aa
MSKGMFGPECRKANEQKNKKQKQKQIMATAKLEEVKQASIKQIQDTIHLEKLFQLLVQKC
HYYFDVQRNNIAMALEVIYWKWLHRVYKNMMHQKEKEHMINWVEKHMLQRISAQQEKETV
AKCIANKSKAALKEGSSTASSVSVSIPTETTETTDRLNESFQLGTNQRKPNVLSNSVA

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_10|537_bp
atgagtaaaggcatgtttggcccagagtgtcgaaaagcaaatgaacaaaaaaacaaaaag
caaaaacaaaaacaaatcatggcaactgcaaagctagaagaggtgaagcaggcttccatc
aaacaaatccaggacacgattcatttggagaagttattccagttattggttcagaagtgc
cattactattttgatgtccagaggaataacattgctatggctttggaggttatttactgg
aaatggctgcatagagtatataagaatatgatgcatcaaaaggaaaaagagcacatgatc
aactgggtggagaagcacatgctccagaggatctctgcacagcaggaaaaggagacagtt
gccaagtgcattgcaaacaaatctaaagctgctctcaaagaaggctcaagcacagccagt
tctgtcagtgtatccatcccaactgagacaactgaaacaactgaccgactaaatgaaagc
ttccaactcgggaccaaccagagaaagccaaatgtgctttccaattcagttgcatag

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_11|53_aa
MEYYAATKKDEFMSFAGTCMTLETIILSKLMQEQKTKHHMFSLVKGKVFTVLV

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_11|162_bp
atggaatactatgcagccacaaaaaaggatgagttcatgtcctttgcagggacgtgtatg
acgctggaaaccatcattctcagcaaactaatgcaagaacagaaaaccaaacatcacatg
ttctcacttgtgaaaggaaaggtattcactgtcctggtctag

>gi568815591f:94564609_94765590|GENSCAN_predicted_peptide_12|100_aa
MGRNQCKKAENSKNQKASSATKDNNSSPAREQNWMENEFDKLTEVGFRTCVITNSSKQKE
HVLTQCKEAKNLDKRLDKLLIRITSLEKNINDLMELKNTA

>gi568815591f:94564609_94765590|GENSCAN_predicted_CDS_12|303_bp
atggggagaaaccagtgcaaaaaggctgaaaattccaaaaaccagaaagcctcttctgct
acaaaggataacaactcctcaccagcaagggaacaaaactggatggagaatgagtttgac
aaattgacagaagtaggcttcagaacatgcgtaataacaaactcctccaagcaaaaggag
catgttctaacccaatgcaaggaagctaagaacctcgataaaaggttagacaagttgcta
attagaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacacagca
tga