GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:46:31

Sequence gi568815590f:122851511_123054021 : 202511 bp : 44.68% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    779    774    6                               1.05
 1.02 Term -   5149   5066   84  1  0   68   54    80 0.229   0.25
 1.01 Init -  10821  10807   15  0  0  121  105    37 0.832   9.12
 1.00 Prom -  19821  19782   40                              -6.36

 2.00 Prom +  20169  20208   40                              -7.16
 2.01 Init +  20575  20654   80  0  2   95   66   102 0.608   9.23
 2.02 Term +  33052  33187  136  1  1   69   39   104 0.145   1.09
 2.03 PlyA +  35034  35039    6                               1.05

 3.00 Prom +  38752  38791   40                              -4.46
 3.01 Init +  46461  46523   63  2  0   83   91    87 0.989   9.65
 3.02 Term +  64696  64824  129  0  0   88   54   116 0.886   6.38
 3.03 PlyA +  67138  67143    6                               1.05

 4.00 Prom +  74938  74977   40                              -3.56
 4.01 Init +  76995  77034   40  2  1   71   86    32 0.639   1.65
 4.02 Intr +  77334  77384   51  1  0   98  113   -18 0.544   0.58
 4.03 Intr +  78645  78766  122  1  2   83   49   105 0.006   6.31
 4.04 Intr +  84715  84840  126  0  0   51   59   104 0.007   4.68
 4.05 Term +  94659  94754   96  2  0   46   48    76 0.068  -2.63
 4.06 PlyA +  96457  96462    6                               1.05

 5.00 Prom +  97964  98003   40                              -4.26
 5.01 Sngl + 100001 102514 2514  1  0  102   42  2709 0.983 260.40
 5.02 PlyA + 103860 103865    6                               1.05

 6.08 PlyA - 106480 106475    6                               1.05
 6.07 Term - 107705 107608   98  0  2   79   48    37 0.117  -3.07
 6.06 Intr - 110135 110038   98  1  2   75   74    62 0.069   3.15
 6.05 Intr - 119159 118993  167  2  2   47   73   127 0.139   5.86
 6.04 Intr - 123129 123002  128  1  2   30   24   100 0.005  -1.80
 6.03 Intr - 134694 134556  139  0  1   64   58   107 0.238   5.34
 6.02 Intr - 139439 139345   95  0  2   64    5   129 0.089   1.88
 6.01 Init - 145909 145894   16  1  1   94   74    20 0.401   0.60
 6.00 Prom - 147385 147346   40                              -2.56

 7.05 PlyA - 148140 148135    6                               1.05
 7.04 Term - 164075 163937  139  1  1   89   49   121 0.858   5.74
 7.03 Intr - 169989 169937   53  0  2   74   99    28 0.739   0.21
 7.02 Intr - 171269 171174   96  2  0   90   75    30 0.642   2.11
 7.01 Init - 190612 190460  153  1  0   67   80   200 0.984  17.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  78645  78811  167  1  2   83   38   139 0.961   6.48
S.002 Sngl - 115653 115345  309  0  0   74   32   170 0.826   5.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_1|32_aa
MAVDLASGNSGSNTAAGRCERDEYTFDYGSCF

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_1|99_bp
atggctgtggacctggcctcagggaactctggctccaacacggctgctggcagatgtgag
agagatgaatacacctttgattacggctcctgtttctga

>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_2|71_aa
MTNGNVPHPSGLQAKKKDAQTADGGDRSQSSWVNQVEPECKSCSNSRKYRGRPLAMEAWS
SPRRRGDGGNW

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_2|216_bp
atgaccaatgggaatgtgccgcatccttcaggtctgcaggcgaagaaaaaagatgcacag
acagctgatggaggtgacaggagccagagctcttgggtcaatcaggtagaacctgagtgc
aaaagctgcagcaactcccgcaagtatcgtgggcgtccgctggccatggaagcctggtct
tcaccgaggaggaggggtgatggaggaaactggtag

>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_3|63_aa
MVVRSIRVNETLQDIKMEISKQGSKDWQRGENKKRRLIPGCIPAGQGDPACTSSSRILLS
HRG

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_3|192_bp
atggtggtccgctccattcgagtgaatgaaacacttcaggacattaaaatggaaatcagc
aagcaaggctccaaagactggcaacgaggcgagaacaagaagaggaggctcattcctggc
tgcatccctgctgggcagggtgacccggcctgcacatcttccagccgcatccttttgagc
catcgaggctga

>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_4|144_aa
MGNQHGLLLKEEMGVGKEMRKPGDHLDLGQGLRSSCKRMHVEMFCGLQCTLKTQGILITI
SSITAVITGAEGGVEDRDDVIRFVFRNMMFSHGISCEVWGSKQSAAKNKALKFAYQTRRL
CSKLQVPDFMVLVLTLLVVHGLSK

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_4|435_bp
atggggaaccagcatggattattactgaaagaagagatgggtgtgggaaaggaaatgagg
aagccaggtgatcatcttgacttgggacaagggctaagaagctcctgcaagaggatgcat
gtagaaatgttttgtgggctgcaatgcacactcaagacccaagggatacttattaccatc
agcagcatcaccgcggtcattactggtgcagagggaggtgttgaagacagggatgacgtg
atcagattcgtgtttagaaacatgatgttcagccatggcatcagttgcgaggtatggggc
agcaagcaatctgcggctaaaaataaagccttgaagtttgcatatcagacccgaagactt
tgctcaaaactgcaagtaccagacttcatggtgctggtcctcaccttgctggtggttcac
gggctttcaaaatga

>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_5|837_aa
MASKRKSTTPCMVRTSQVVEQDVPEEVDRAKEKGIGTPQPDVAKDSWAAELENSSKENEV
IEVKSMGESQSKKLQGGYECKYCPYSTQNLNEFTEHVDMQHPNVILNPLYVCAECNFTTK
KYDSLSDHNSKFHPGEANFKLKLIKRNNQTVLEQSIETTNHVVSITTSGPGTGDSDSGIS
VSKTPIMKPGKPKADAKKVPKKPEEITPENHVEGTARLVTDTAEILSRLGGVELLQDTLG
HVMPSVQLPPNINLVPKVPVPLNTTKYNSALDTNATMINSFNKFPYPTQAELSWLTAASK
HPEEHIRIWFATQRLKHGISWSPEEVEEARKKMFNGTIQSVPPTITVLPAQLAPTKVTQP
ILQTALPCQILGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQKRPLVTPQAAPEPKR
PHIAQVPEPPPKVANPPLTPASDRKKTKEQIAHLKASFLQSQFPDDAEVYRLIEVTGLAR
SEIKKWFSDHRYRCQRGIVHITSESLAKDQLAIAASRHGRTYHAYPDFAPQKFKEKTQGQ
VKILEDSFLKSSFPTQAELDRLRVETKLSRREIDSWFSERRKLRDSMEQAVLDSMGSGKK
GQDVGAPNGALSRLDQLSGAQLTSSLPSPSPAIAKSQEQVHLLRSTFARTQWPTPQEYDQ
LAAKTGLVRTEIVRWFKENRCLLKTGTVKWMEQYQHQPMADDHGYDAVARKATKPMAESP
KNGGDVVPQYYKDPKKLCEEDLEKLVTRVKVGSEPAKDCLPAKPSEATSDRSEGSSRDGQ
GSDENEESSVVDYVEVTVGEEDAISDRSDSWSQAAAEGVSELAESDSDCVPAEAGQA

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_5|2514_bp
atggctagcaaacgaaaatctacaactccatgcatggttcggacatcacaagtagtagaa
caagatgtgcccgaggaagtagacagggccaaagagaaaggaatcggcacaccacagcct
gacgtggccaaggacagttgggcagcagaacttgaaaactcttccaaagaaaacgaagtg
atagaggtgaaatctatgggggaaagccagtccaaaaaactccaaggtggttatgagtgc
aaatactgcccctactccacgcaaaacctgaacgagttcacggagcatgtcgacatgcag
catcccaacgtgattctcaaccccctctacgtgtgtgcagaatgtaacttcacaaccaaa
aagtacgactccctatccgaccacaactccaagttccatcccggggaggccaacttcaag
ctgaagttaattaaacgcaataatcaaactgtcttggaacagtccatcgaaaccaccaac
catgtcgtgtccatcaccaccagtggccctggaactggtgacagtgattctgggatctcg
gtgagtaaaacccccatcatgaagcctggaaaaccaaaagcggatgccaagaaggtgccc
aagaagcccgaggagatcacccccgagaaccacgtggaagggaccgcccgcctggtgaca
gacacagctgagatcctctcgagactcggcggggtggagctcctccaagacacattagga
cacgtcatgccttctgtacagctgccaccaaatatcaaccttgtgcccaaggtccctgtc
ccactaaatactaccaaatacaactctgccctggatacaaatgccacgatgatcaactct
ttcaacaagtttccttacccgacccaggctgagttgtcctggctgacagctgcctccaaa
cacccagaggagcacatcagaatctggtttgccacccagcgcttaaagcatggcatcagc
tggtccccagaagaggtggaggaggcccggaagaagatgttcaacggcaccatccagtca
gtacccccgaccatcactgtgctgcccgcccagttggcccccacaaaggtgacgcagccc
atcctccagacggctctaccgtgccagatcctcggccagactagcctggtgctgactcag
gtgaccagcgggtcaacaaccgtctcttgctcccccatcacacttgccgtggcaggagtc
accaaccatggccagaagagacccttggtgactccccaagctgcccccgaacccaagcgt
ccacacatcgctcaggtgccagagcccccacccaaggtggccaaccccccgctcacacca
gccagtgaccgcaagaagacaaaggagcagatagcacatctcaaggccagctttctccag
agccagttccctgacgatgccgaggtttaccggctcatcgaggtgactggccttgccagg
agcgagatcaagaagtggttcagtgaccaccgatatcggtgtcaaaggggcatcgtccac
atcaccagcgaatcccttgccaaagaccagttggccatcgcggcctcccgacacggtcgc
acgtatcatgcgtacccagactttgccccccagaagttcaaagagaaaacacagggtcag
gttaaaatcttggaagacagctttttgaaaagttcttttcctacccaagcagaactggat
cggctaagggtggagaccaagctgagcaggagagagatcgactcctggttctcggagagg
cggaagcttcgagacagcatggaacaagctgtcttggattccatggggtctggcaaaaaa
ggccaagatgtgggagcccccaatggtgctctgtctcgactcgaccagctctccggtgcc
cagttaacaagttctctgcccagcccttcgccagcaattgcaaaaagtcaagaacaggtt
catctcctgaggagcacgtttgcaagaacccagtggcctactccccaggagtacgaccag
ttagcggccaagactggcctggtccgaactgagattgtgcgttggttcaaggagaacaga
tgcttgctgaaaacgggaaccgtgaagtggatggagcagtaccagcaccagcccatggca
gatgatcacggctacgatgccgtagcaaggaaagcaacaaaacccatggccgagagccca
aagaacgggggtgatgtggttccacaatattacaaggaccccaaaaagctctgcgaagag
gacttggagaagttggtgaccagggtaaaagtaggcagcgagccagcaaaagactgtttg
ccagcaaagccctcagaggccacctcagaccggtcagagggcagcagccgggacggccag
ggtagcgacgagaacgaggagtcgagcgttgtggattacgtggaggtgacggtcggggag
gaggatgcgatctcagatagatcagatagctggagtcaggctgcggcagaaggtgtgtcg
gaactggctgaatcagactccgactgcgtccctgcagaggctggccaggcctag

>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_6|246_aa
MTKVHALEDDWFLLCVLLKAVSVPDAMPVKQEPESGWPSMTTNMKERLLQRKTIHSPGLE
VFEEILRGYNTRGTYANMSARFELQFAMSDPSRMENEFETGGIQVRTLTPSPREPDDNKE
GEVEEKILGDKAQGGKTATDVLSPNPAKERWVSTGLQDGVERAVELEKAGIQDLPLPGYV
LSTSSCHLVKKVPCFPFAFRHDRKFPEASPAMLNFIPNHQELETVDRNQEAAKVVAGALE
SILDTG

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_6|741_bp
atgacgaaggtccatgccttggaggatgactggtttctgctgtgtgtgctgctgaaggca
gtcagtgtccctgatgccatgccagttaaacaggaacctgaatctggatggccttccatg
accacaaacatgaaagaaagactcctacaaaggaagactatccactctcctggactggaa
gtgtttgaagaaatcctcaggggatataacacccggggcacatatgccaatatgtcggcc
cgttttgaactccagtttgcgatgtcagatccctccaggatggaaaatgaatttgaaacg
ggaggtatccaagtcagaacccttacaccaagccctcgggagccagacgacaataaagaa
ggcgaagtagaggaaaagatcctaggagacaaggcccaaggcgggaagacagctaccgat
gttctttctcccaacccggctaaagaacgttgggtcagcacaggactgcaggatggggtg
gaaagagctgtggagttggagaaagctgggatccaggatctgccacttcctggctacgtg
ctgagcacttcttcctgccaccttgtgaagaaggtgccttgcttccccttcgccttccgc
catgatcgtaagtttcctgaggcctccccagccatgctgaacttcatccctaatcatcag
gagttggaaactgttgacagaaatcaggaggcagcgaaggtggtggctggagctttggag
tcaattttagacactggctga

>gi568815590f:122851511_123054021|GENSCAN_predicted_peptide_7|146_aa
MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQLLMIPLIMS
VLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSYRWLPSRRGGVSGFGVPPA
SMRRAADQNGGGGRHNWGQGFRLGDQ

>gi568815590f:122851511_123054021|GENSCAN_predicted_CDS_7|441_bp
atgtcggacatcggagactggttcaggagcatcccggcgatcacgcgctattggttcgcc
gccaccgtcgccgtgcccttggtcggcaaactcggcctcatcagcccggcctacctcttc
ctctggcccgaagccttcctttatcgctttcagttgctgatgattcctctgatcatgtca
gtactttatgtctgggcccagctgaacagagacatgattgtatcattttggtttggaaca
cgatttaaggcctgctatttaccctgggttatccttggattcaactatatcatcggaggc
tcgtaccgctggctgcccagtaggagaggaggagtatcaggatttggtgtgccccctgct
agcatgaggcgagctgctgatcagaatggcggaggcgggagacacaactggggccagggc
tttcgacttggagaccagtga