GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:45:11

Sequence gi568815595r:165087900_165290830 : 202931 bp : 34.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -  18284  18123  162  0  0   31   89   156 0.354   9.03
 1.02 Intr -  34368  34227  142  0  1   47   77    34 0.008  -2.79
 1.01 Init -  35195  35046  150  2  0   52   60   175 0.019  11.19
 1.00 Prom -  35487  35448   40                              -5.45

 2.02 PlyA -  36427  36422    6                              -1.75
 2.01 Sngl -  37643  37053  591  2  0   65   33   207 0.866   8.84
 2.00 Prom -  46999  46960   40                              -3.65

 3.02 PlyA -  47740  47735    6                               1.05
 3.01 Sngl -  48550  47996  555  1  0   68   47   222 0.710  11.97
 3.00 Prom -  49856  49817   40                              -5.55

 4.04 PlyA -  50347  50342    6                               1.05
 4.03 Term -  51423  50689  735  0  0   -8   36   558 0.589  33.47
 4.02 Intr -  60499  60417   83  2  2   92   68   -19 0.007  -5.06
 4.01 Init -  70016  69899  118  2  1   81  115    35 0.542   5.91
 4.00 Prom -  75006  74967   40                              -3.25

 5.02 PlyA -  75170  75165    6                               1.05
 5.01 Sngl -  81027  80689  339  0  0   88   32   270 0.663  17.18
 5.00 Prom -  99599  99560   40                              -6.15

 6.02 PlyA -  99947  99942    6                               1.05
 6.01 Sngl - 102931  99998 2934  1  0   66   42  1857 0.624 170.99
 6.00 Prom - 104135 104096   40                             -11.74

 7.03 PlyA - 104644 104639    6                               1.05
 7.02 Term - 105820 105459  362  2  2   23   43   231 0.178   5.81
 7.01 Init - 108933 108693  241  0  1   62  111    94 0.427   6.77
 7.00 Prom - 113603 113564   40                              -4.15

 8.00 Prom + 123972 124011   40                              -4.35
 8.01 Init + 157824 157963  140  2  2   73   72    98 0.523   6.36
 8.02 Term + 161867 162158  292  2  1   25   42   172 0.666   0.13
 8.03 PlyA + 162948 162953    6                               1.05

 9.03 PlyA - 164174 164169    6                               1.05
 9.02 Term - 182424 182000  425  1  2  -64   47   397 0.006  14.87
 9.01 Intr - 192117 191919  199  0  1   -7   83   239 0.541  11.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  35195  35007  189  2  0   52   48   253 0.959  12.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_1|152_aa
MFLKRVKLPQEEPQVGPLISIPEEGTVIIGDDGSMGVIALIDLPVGQDVELQANIQILKM
QRTQVRYSTGKSSPTHIIIGFSKIDMKLKILKATREKAVSSSLESGFSAGKFDRQSELGQ
SSSKSGLTTEEVFQRADWYLDADLEKRMGPGX

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_1|456_bp
atgtttctgaaaagagtgaaacttcctcaagaagagcctcaggtaggtcctttaataagt
attccagaagaaggcactgttatcataggagatgacggctccatgggtgttattgccctt
atagaccttccagtgggacaagatgtagagctacaggccaacattcaaattctgaaaatg
cagagaacccaagtaagatactccacaggaaaatcatctccaacacatataatcatagga
ttctctaagattgacatgaaattaaaaatattaaaggcaactagagagaaagcagtttca
agttctctggaatctggatttagcgcaggtaaatttgacagacaaagtgaattgggtcag
tcttcgagcaaaagtggtttgacaactgaagaggtgttccaaagagcagattggtatttg
gatgcagacctagaaaagagaatgggaccaggtgnn

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_2|196_aa
MSGKSISADVKAAEEFWETVHKLIVEENYLPEQIFNMNETSLFWKQMPERTFIYNEVSSM
PGVKAFKDRKTALLGGNIAGYKLKPFVIWHHRDSRAFKHINKCTLIVNYRNSMKLHIIQF
PFQDTLWNCYASKMEKCFVKNDIPFKIVFIVHNAPAHPPFIGDFLPNIKEVLFFSKHHLF
GPTNGTRSYSSFSSSF

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_2|591_bp
atgagtggtaagtctataagtgctgatgtgaaagcagctgaagaattttgggaaactgta
cataagctgattgtggaggaaaattacttgccagagcaaatcttcaatatgaatgaaacc
tccctattctggaaacagatgcctgaaagaactttcatctacaatgaagtgtcatcaatg
ccaggtgtgaaggcttttaaggacaggaaaacagccttgcttgggggcaatattgcaggc
tacaaattaaaaccttttgtgatctggcaccatagggactcccgggccttcaagcatatt
aataagtgcacactgatagtgaactacagaaacagtatgaagttacatattatccagttc
cccttccaagataccctctggaactgctatgcaagcaaaatggagaagtgctttgtaaaa
aatgacatacctttcaaaattgtgtttattgttcataatgctcccgcacatcctcctttt
ataggtgattttcttcctaatattaaagaggtgctttttttctccaaacaccatctcttt
ggtccaaccaatggaacaaggagttacagcagcttttcttcttccttttag

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_3|184_aa
MPFLTTPTHHSVGSFGPVNQQEKEVKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLK
LISNFSKASGYKINVQKSQAFLHTNNRQTESQIMSELPFTIASKRIIQLTRDVKDLFKEN
YKSLLHEIKKDTNKWKNIPCSCIGRINTMKMGILPKVIYRFNAIPIKLPMTFFTELEKTT
LKFI

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_3|555_bp
atgccctttctcaccactcctactcatcatagtgttggaagttttggcccggtcaaccag
caggagaaagaagtaaagggcattcaattaggaaaagaggaagtcaaattgtcccttttt
gcagatgacatgattgtatatttagaaaaccccatcgtctcagcccaaaatctccttaag
ctgataagcaacttcagcaaagcctcaggatacaaaatcaatgtgcaaaaatcacaagca
ttcctacacaccaataatagacaaacagagagccaaatcatgagtgaactcccattcaca
attgcttcaaagagaataatccaacttacaagggatgtgaaggacctcttcaaggagaac
tacaaatcactgctccatgaaataaaaaaggacactaacaaatggaagaacattccatgc
tcatgtataggaagaatcaataccatgaaaatgggcatactgcccaaggtaatttataga
ttcaatgccatccccatcaagctaccaatgactttcttcacagaactggaaaaaactact
ttaaagttcatatga

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_4|311_aa
MHLLGKCFWEECEWWEKTEKWFWARGQWRFLPELAEKTDGSIVISCFIPDVDNFCVFSRF
FLPVLLEKDVRTHRKEAKNLEKRLDEWQTRINSIEKTLNYLKELKTMTRQLRDACTSFSS
QFDQVEERVSVIEDQMNEMKQEEKFREKRVKRNEQSLQEIWDYVKRPNLRLIGVPESDGE
NGTKLENTLQDIIQENLPNLARQANIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEK
MLRAATDKGRVTHKGKPIRLTADLSAETLQARRKWGPIFNKLKEKTFQPRISYPAKLSFI
SEGEIKSFTDE

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_4|936_bp
atgcacctgctaggtaagtgcttctgggaagagtgtgaatggtgggagaagactgaaaaa
tggttctgggctagaggacagtggcgatttttacctgaactagctgagaaaaccgatggt
tctatagtcatatcctgtttcatccctgatgttgataatttttgtgttttctctcgattt
tttttgccagttttgctagagaaggatgttcgaacccatcgcaaagaagctaaaaacctt
gaaaaaagattagacgaatggcaaactagaataaacagcatcgagaagaccttaaattac
ctgaaggagctgaaaaccatgacacgacaactacgagatgcatgcacaagcttcagtagc
caattcgatcaagtagaagaaagggtatcagtcattgaagatcaaatgaatgaaatgaag
caagaagagaagtttagagaaaaaagagtgaaaagaaatgaacaaagcctccaagaaata
tgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgatggtgag
aatggaaccaagttggaaaacactcttcaggatattatccaggagaacctccccaaccta
gcaaggcaggccaacattcaaattcaggaaatacagagaatgccacaaagatactcctcg
agaagagctactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaa
atgttaagggcagccacagataaaggtcgggttacccacaaagggaaacccatcagacta
acagctgatctctcagcagaaactctacaagccagaagaaagtgggggccaatattcaac
aagcttaaagaaaagacttttcaacccagaatttcatatccagccaaactaagcttcata
agtgaaggagaaataaaatcctttacagatgagtaa

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_5|112_aa
MGRNQSRKAENSKYQSTFPPPEDCSSLTAMEQNWMENDIDKLTEIGFRRTVITNFSELKE
QVLTHHKEAKNLEKTLDEWLTRINSTEKTLNDLMELKTMKRKPCDSCTSFSS

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_5|339_bp
atggggagaaaccaaagcagaaaagctgaaaattctaaataccagagcacctttcctccc
ccagaggattgcagctccttgacagcaatggaacaaaactggatggagaatgacattgac
aagttgacagaaataggcttcagaaggacagtaataacaaacttctctgagctaaaggag
caggttctaacccatcacaaggaagctaaaaaccttgaaaaaacattagacgaatggctg
actagaataaacagtacagagaagaccttaaatgacctgatggagctgaaaaccatgaaa
cgaaaaccttgtgactcatgcacaagcttcagtagctaa

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_6|977_aa
MKPSIAEMLHRGRMLWIILLSTIALGWTTPIPLIEDSEEIDEPCFDPCYCEVKESLFHIH
CDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGA
FNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLIL
NDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEENPWNCTCEI
VQLKSWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLSDSEVEASLGIPHSSS
SKENAWPTKPSSMLSSVHFTASSVEYKSSNKQPKPTKQPRTPRPPSTSQALYPGPNQPPI
APYQTRPPIPIICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLI
QKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQ
SLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTSLARLNLRKNYFL
YLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHR
DVRTIELEVLCPEMLHVAPAGESPAQPGDSHLIGAPTSASPYEFSPPGGPVPLSVLILSL
LVLFFSAVFVAAGLFAYVLRRRRKKLPFRSKRQEGVDLTGIQMQCHRLFEDGGGGGGGSG
GGGRPTLSSPEKAPPVGHVYEYIPHPVTQMCNNPIYKPREEEEVAVSSAQEAGSAERGGP
GTQPPGMGEALLGSEQFAETPKENHSNYRTLLEKEKEWALAVSSSQLNTIVTVNHHHPHH
PAVGGVSGVVGGTGGDLAGFRHHEKNGGVVLFPPGGGCGSGSMLLDRERPQPAPCTVGFV
DCLYGTVPKLKELHVHPPGMQYPDLQQDARLKETLLFSAGKGFTDHQTQKSDYLELRAKL
QTKPDYLEVLEKTTYRF

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_6|2934_bp
atgaaaccttccatagctgagatgcttcacagaggaaggatgttgtggataattcttcta
agcacaattgctctaggatggactaccccgattcccctaatagaggactcagaggaaata
gatgagccctgttttgatccatgctactgtgaagttaaagaaagcctctttcatatacat
tgtgacagtaaaggatttacaaatattagtcagattaccgagttctggtcaagacctttt
aaactgtatctgcagaggaattctatgaggaaattatataccaacagttttcttcatttg
aataatgctgtgtctattaatcttgggaacaatgcattgcaggacattcagactggagct
ttcaatggtcttaagattttaaagagactatatctacatgaaaacaaactagatgtcttc
agaaatgacaccttccttggcttggaaagtctagaatatctgcaggcagattacaatgtc
attaaacgtattgagagtggggcatttcggaacctaagtaaattgagggttctgatttta
aatgataatctcatccccatgcttccaaccaatttatttaaggctgtctctttaacccat
ttggacctacgtggaaataggttaaaggttcttttttaccgaggaatgctagatcacatt
ggcagaagcctgatggagctccagctggaagaaaacccttggaactgtacatgtgaaatt
gtacaactgaagagttggctggaacgcattccttatactgccctggtgggagacattacc
tgtgagacccctttccacttccatggaaaggacctacgagaaatcaggaagacagaactc
tgtcccttgttgtctgactctgaggtagaggctagtttgggaattccacattcgtcatca
agtaaggagaatgcatggccaactaagccttcctcaatgctatcctctgttcattttact
gcttcttctgtcgaatacaagtcctcaaataaacagcctaagcccaccaaacagcctcga
acaccaaggccaccctccacctcccaagctttatatcctggtccaaaccagcctcccatt
gctccttatcagaccagaccaccaatccccattatatgccccactgggtgtacctgtaat
ttgcacatcaatgaccttggcttgactgtcaactgcaaagagcgaggatttaataacatt
tctgaacttcttccaaggcccttgaatgccaagaaactgtatctgagtagcaatctgatt
cagaaaatataccgttctgatttttggaatttttcttccttggatctcttgcatctgggg
aacaatcgtatttcctatgtccaagatggggcctttatcaacttgcccaacttaaagagc
ctcttccttaatggcaacgatatagagaagctgacaccaggcatgttccgaggcctacag
agtttgcactacttgtactttgagttcaatgtcatccgggaaatccagcctgcagccttc
agcctcatgcccaacttgaagctgctattcctcaataataacttactgaggactctgcca
acagacgcctttgctggcacatccctggcccggctcaacctgaggaagaactacttcctc
tatcttcccgtggctggtgtcctggaacacttgaatgccattgtccagatagacctcaat
gagaatccttgggactgcacctgtgacctggtcccctttaaacagtggatcgaaaccatc
agctcagtcagtgtggttggtgatgtgctttgcaggagccctgagaacctcacgcaccgt
gatgtgcgcactattgagctggaagttctttgcccagagatgctgcacgttgcaccagct
ggagaatccccagcccagcctggagattctcaccttattggggcaccaaccagtgcatca
ccttatgagttttctcctcctgggggccctgtgccactttctgtgttaattctcagcctg
ctggttctgtttttctcagcagtctttgttgctgcaggcctctttgcctacgtgctccga
aggcgtcgaaagaagctgcccttcagaagcaagcggcaggaaggtgtggaccttactggc
atccaaatgcaatgccacaggctgtttgaggatggtggaggtggtggtggcggaagtggg
ggtggtggtcgaccaactctttcctctccagagaaggcccctcccgtgggtcatgtgtat
gagtacatcccccacccggttacccaaatgtgcaacaaccccatctacaagcctcgtgag
gaggaggaggtggctgtttcatcagcccaagaagcagggagtgcagaacgtgggggtcca
gggacacaaccaccgggaatgggtgaggctctcctaggaagtgagcagtttgctgagaca
cccaaggagaaccatagtaactaccggaccttgctggaaaaagagaaggagtgggcccta
gcagtgtccagctcccagcttaacaccatagtgacggtgaatcaccatcaccctcaccac
ccagcagttggtggggtttcaggagtagttgggggaactgggggagacttggcagggttc
cgccaccatgagaaaaatggtggggtggtgctgtttcctcctgggggaggctgtggtagt
ggcagtatgctactagatcgagagaggccacagcctgccccctgcacagtgggatttgtg
gactgtctctatggaacagtgcccaaattaaaggaactgcacgtgcaccctcctggcatg
caatacccagacttacagcaggatgccaggctcaaagaaacccttctcttctcggctgga
aagggcttcacagaccaccaaacccaaaaaagtgattacctcgagttaagggccaaactt
caaaccaagccggattacctcgaagtcctggagaagacaacatacaggttctaa

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_7|200_aa
MRGERTAAADLHSWRGGGAGGAGGTRWRSSGDGLIWGLPSAAPLVRDLGAADGFAFRFQP
CVSYIDSLYTTWRSSLGGDVVVCISFQRIGLSLFLKSGRKEMLLNPGAIEGFDLQHNKRI
PGATGSKQNAGETRSKSFRLSELLFGTPRQNQTDSAFLLWGPGFPPIPVIAGNGCPVKMI
LTKDSLTFQTTCTREMSFGN

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_7|603_bp
atgcgcggcgagaggactgcggcggctgatttacacagttggcgcggaggaggggccggg
ggtgcgggggggacgcgctggcggagctccggcgatgggctgatctgggggctcccgagc
gccgctcccttggtgcgcgatttgggggcggctgatggatttgcattcaggttccagccc
tgcgtttcctatattgactccttatacacgacctggcgctccagtttaggaggagacgtt
gtggtctgtatctccttccagagaattggcttgtctctgtttttaaaaagtggaagaaaa
gaaatgctgttgaatccaggggctatcgaaggctttgacctgcagcacaacaaaagaatt
cctggtgcaacgggatcgaagcaaaatgcaggagaaactcggtccaagtctttcaggctg
tctgagctcttattcgggacacccaggcagaatcagacagattcagcttttctgctttgg
ggacctggatttccccccatccccgtcattgcagggaatggctgtcctgtgaaaatgata
cttacgaaggatagtctcacttttcaaaccacctgcactagagagatgagctttggaaac
taa

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_8|143_aa
MGSFLLTEKIQSNFEKGKNRETSNTGGRIPSLELQDKHFSIRPYQQRYPYLNQTPNIECL
LPQYPYLNQTPNNIECLLPQRERRHQREDSPGQKRQAMEGENAKNPSDYCTRVPKITSSS
QDCSFPVPISDTICVNVNNREAL

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_8|432_bp
atgggaagtttcctgcttacggagaaaattcagtcaaattttgaaaaaggcaagaataga
gaaacaagtaatactggaggaagaattccttctttagaacttcaagataaacatttcagc
atcaggccatatcagcagaggtatccttatctaaatcagacccctaatatcgaatgtctt
ctaccacaatatccttatctaaaccagacccctaacaatatcgaatgtcttctaccacaa
cgagagaggcgccatcagagggaagactcaccagggcagaaaaggcaggccatggaaggg
gagaacgcaaagaaccccagtgactactgcacacgggttccaaaaatcacaagttcctcc
caggattgctcctttccagtccccatttctgacaccatatgtgtcaatgtgaataacaga
gaagcactataa

>gi568815595r:165087900_165290830|GENSCAN_predicted_peptide_9|207_aa
ELRVGGYKVEHTFWAKNKEEGGGGEEEGGGGGRRGGGGRKEKRRKKEKKEKEEEKKREEG
GGEGGGDEWITRITNAEKSLKDLMELKTMAGELRDECTSLSSRLDQLEERVSVMEDQMNE
MKREEKFREKRIKRNEQSLREIWDYVKRPNLRLIGVPESYRANGTKLENTLQDIIQENFP
NLARQANIQIQEIQRTPQRYSWTQDIH

>gi568815595r:165087900_165290830|GENSCAN_predicted_CDS_9|624_bp
gaattgcgggtggggggatataaagtagaacatacattttgggcaaaaaataaggaagaa
ggaggaggaggtgaagaagaaggaggagggggaggaagaagaggaggaggaggaaggaag
gagaaaagaaggaagaaggagaagaaggagaaggaggaggagaagaagagagaagaagga
ggaggagaaggaggaggagatgaatggataacaagaataaccaacgcagagaagtcctta
aaggacctgatggagctgaaaaccatggcaggagaactacgtgacgaatgcacaagcctc
agtagccgattggatcaactggaagaaagggtatcagtgatggaagatcaaatgaatgaa
atgaagcgagaagagaagtttagagaaaaaagaataaaaagaaacgaacaaagcctccga
gaaatatgggattatgtgaaaagaccaaatctacgtctgattggtgtacccgaaagttac
agggcgaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttcccc
aatctagcaaggcaggccaacattcaaattcaggaaatacagagaacgccacaaagatac
tcctggacacaggatatacattga