GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:42:26

Sequence gi568815588f:62276194_62499786 : 223593 bp : 38.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3334   3473  140  1  2  -15   91   159 0.596   5.09
 1.02 Intr +   4404   4655  252  1  0   55   44   175 0.043   6.28
 1.03 Intr +   4767   4928  162  1  0   15   76   128 0.065   3.33
 1.04 Intr +   7956   8062  107  1  2   43   87    29 0.006  -2.69
 1.05 Intr +  30919  31047  129  0  0   72   81    49 0.031   2.57
 1.06 Intr +  33912  33957   46  2  1  131   86    39 0.043   5.06
 1.07 Term +  40895  41214  320  0  2   40   33   179 0.096   1.66
 1.08 PlyA +  41465  41470    6                               1.05

 2.00 Prom +  48390  48429   40                              -0.95
 2.01 Init +  62119  62305  187  0  1   65   90   126 0.373   9.77
 2.02 Term +  70521  70606   86  1  2   90   48    84 0.715   1.44
 2.03 PlyA +  71327  71332    6                               1.05

 3.02 PlyA -  72701  72696    6                               1.05
 3.01 Sngl -  75829  75260  570  1  0   53   53   218 0.916  10.71
 3.00 Prom -  76481  76442   40                              -3.45

 4.00 Prom +  76912  76951   40                              -9.65
 4.01 Init +  78226  78350  125  0  2   79  131    63 0.883   9.40
 4.02 Intr +  84788  84929  142  2  1   37  101   110 0.785   6.63
 4.03 Intr +  91099  91265  167  0  2   93   58   113 0.213   6.64
 4.04 Intr +  97807  97912  106  1  1   70   21    90 0.089  -0.20
 4.05 Intr +  98219  98265   47  1  2   98   94   115 0.490   9.39
 4.06 Intr +  99988 100743  756  1  0  122   89   752 0.130  68.35
 4.07 Intr + 112203 112566  364  0  1   93   94   280 0.051  23.36
 4.08 Term + 123399 123596  198  2  0   56   42   218 0.739  10.42
 4.09 PlyA + 123821 123826    6                               1.05

 5.03 PlyA - 124256 124251    6                               1.05
 5.02 Term - 127108 127019   90  1  0  109   34    79 0.155   1.34
 5.01 Init - 131991 131923   69  0  0   66   95    45 0.107   4.10
 5.00 Prom - 135215 135176   40                              -3.65

 6.00 Prom + 142562 142601   40                              -2.15
 6.01 Init + 160464 160584  121  2  1   59   52    97 0.038   3.60
 6.02 Intr + 172438 172524   87  2  0  105   99   -10 0.076   0.82
 6.03 Intr + 175141 175260  120  2  0   52   72   120 0.483   6.35
 6.04 Intr + 175467 175681  215  1  2    6   30   115 0.026  -4.99
 6.05 Intr + 183548 183604   57  1  0  109   88    87 0.653   8.96
 6.06 Intr + 184965 185100  136  2  1   26   63   123 0.386   2.82
 6.07 Intr + 190023 190175  153  1  0   51   58   130 0.092   5.42
 6.08 Intr + 190264 190390  127  2  1   87   27    79 0.025   0.52
 6.09 Intr + 216995 217032   38  2  2  122  110    60 0.108   8.59
 6.10 Term + 221378 221460   83  0  2   82   48    48 0.028  -2.92
 6.11 PlyA + 222666 222671    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  40882  41214  333  0  0   39   33   186 0.803   3.98
S.002 Term -  52884  52777  108  0  0   56   48   155 0.812   5.83
S.003 Intr - 117065 116885  181  1  1   78   12   188 0.829   9.15
S.004 Init - 118037 117967   71  2  2  112   74    68 0.947   8.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:62276194_62499786|GENSCAN_predicted_peptide_1|385_aa
XVCEPVSSSASVDEEYTLITEAVSEKELCALRNVVFGLPFAVMNVQAALAAFPRGRARDL
QPAMPEPPTHSMGSCAARASPTSTTPCSTAPSPIDHPRAGECERTARDWQAAPPAALVWD
PLGEASWAPESAALVRMWRTFMSSSGLVNTPVDTLYLAALVRTWRTFMSSSGIVNTPIGT
LYLAQGTLCPQGPSPYIPLSTAATFERLLVQFVFPAVSLKATAYVLAAQCRVSVTPFACT
LLAPKFLSSIQEELAHISELKMVKLPLVLFTDHIQLELKERPYAWVPTAGAVPLRKLWGS
SSREGLCLASSVELGEAASFTDARLAVWRGSNGVEMVKGVSEQRSLRHPHKVPKTQTAGG
AVGCFLERPSDRQRPLIESWTQEAL

>gi568815588f:62276194_62499786|GENSCAN_predicted_CDS_1|1158_bp
nnagtatgtgagcctgttagtagttctgcatcggttgatgaagaatatacactgatcact
gaagctgtcagtgagaaggaactctgcgccttacggaatgttgtttttggcttgccattt
gctgttatgaatgtccaggcagccttagctgccttccctcggggcagggctcgggacctg
cagcccgccatgcctgagcctcccacccactccatgggctcctgtgcagcccgagcctcc
ccaacgagcaccaccccctgctccaccgcacccagtcccatcgaccacccaagggctggg
gaatgtgagcgcacggcgcgggactggcaggcagctccacctgcagccctggtgtgggat
ccactaggtgaagccagctgggctcctgagtctgctgctctggtgaggatgtggagaacc
tttatgtctagctcagggcttgtaaatacaccagtggacactctgtatctagctgctctg
gtgaggacgtggagaacctttatgtctagctcagggattgtaaatacaccaattggcact
ctgtatctagctcaaggtacattatgtcctcaaggcccatccccttatattcctctctca
acagcagcaacatttgaaagactcttggtgcagtttgtctttccagctgtgagcctaaaa
gctacggcttatgtgttagcagctcagtgtagggtcagtgtgacaccttttgcatgcacc
ctcttggcacccaagttcttgtctagcattcaggaggaattagctcacataagtgagttg
aagatggtaaagctcccactggttctcttcactgaccacatccaactggagctaaaggag
agaccctatgcctgggtccccactgctggggctgttcctttgagaaagctttggggatcc
agcagcagggaaggtctgtgccttgcttccagtgtggagctaggagaggcagcaagcttc
acagatgcccgtttggcagtatggcggggaagcaatggcgtagaaatggtgaaaggggtg
tctgaacagaggagcctgagacaccctcacaaggtccccaaaacccagacggctggggga
gcagtaggatgctttctagagagacccagcgataggcaaaggccattgatagaaagctgg
acccaagaggctttatag

>gi568815588f:62276194_62499786|GENSCAN_predicted_peptide_2|90_aa
MPAIMYPYKPQTPGSMRRPTEEQKSSRATWQRGREGKEHLNIKRSLAGDDQRGVSCRTAE
LQVFLSWSWRLTALQLHDQPLEGQYEFGAP

>gi568815588f:62276194_62499786|GENSCAN_predicted_CDS_2|273_bp
atgcctgctatcatgtacccatataaaccccaaaccccaggatctatgaggagaccaaca
gaagagcagaagagcagcagagcaacatggcagagagggagagaaggaaaggagcatctg
aatatcaagaggagtttggctggggacgatcagagaggagtcagctgcaggacagctgaa
ctccaggttttcttgtcatggtcttggaggctaacagcattacaactacatgatcagcca
ctggaggggcagtacgagtttggagctccttga

>gi568815588f:62276194_62499786|GENSCAN_predicted_peptide_3|189_aa
MWFCGPGPGSPCCVQPKDLVPCISATPAVAERGQHRAWVVASESASPKSWQLPYGVEPAS
TQKSRTEVWEPLPRFQRLYGNAWIPRQKFAAGEGPSWRMSARAVQKGKVGLEPQHRVPTG
APPSRAVRRGPWPSRPQNGRSTNSLHCVPGKATDTQHQPVKAARRKAVPCKATGAELPKT
TSCISVTLM

>gi568815588f:62276194_62499786|GENSCAN_predicted_CDS_3|570_bp
atgtggttttgtgggccaggcccagggtccccatgctgtgtgcagcctaaggacttggtg
ccttgcatctcagccaccccagccgtggctgaaaggggacaacatagagcttgggttgtg
gcttcagagagtgcaagccccaagtcttggcagcttccatatggtgttgagcctgcgagc
acacagaagtcaagaactgaggtttgggaacctctgcctagatttcagaggctgtatggg
aatgcctggatccccaggcagaaatttgctgcaggggaggggccctcatggagaatgtct
gctagggcagtgcagaagggaaaggtggggttggagccccaacacagagtccctactggg
gcaccacctagtagagctgtgagaagaggaccatggccctccagaccccagaatggtaga
tccaccaacagcttgcactgtgtgcctggaaaagccacagacactcaacaccagccagtg
aaagcagccaggaggaaagctgtaccctgcaaagccacaggagccgagctgcccaagacc
acctcttgcatcagtgtgaccctaatgtga

>gi568815588f:62276194_62499786|GENSCAN_predicted_peptide_4|634_aa
MVGTLWLRVLPEIAARCRLELQSSEGLTGAVDSVIKALLQSRDRQYETLAMLGSSSELQL
PVSYMVTRVDNHTLQCTVLPDDFAQLQANKMSEFLLYESGTFSAPPTRPSCDLCTRWFLF
TSAMSGSSPSPSTEADVLLVQPAEPAKKLARACRKRRDCEADTRLSFPPPGNDPSISRSD
HQHRRRRLQQQQQQVGTFRVMQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSL
SSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVN
LYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAH
VREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNR
QVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQ
RVELAEKQLEYYQSQQASGFVRDLSGHVVSHPGPATECKIPVVGENGLRTEKRELGDLQG
LSRHHLRALPGPCLYCGNVTGESRTPGSKGRNHLKKAKDDRASMQPAKAIHEQAESSRDL
CRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII

>gi568815588f:62276194_62499786|GENSCAN_predicted_CDS_4|1905_bp
atggttggtacactctggctcagggtcttacctgagattgcagccagatgtaggctagag
ctgcagtcatctgaaggcttgaccggggcagtggattcagttataaaggctctcttacaa
agccgtgataggcagtatgaaacccttgcgatgctgggcagcagcagtgagctgcagctc
ccagtcagctatatggtcacgagagtagataaccataccctacagtgtactgtgctgcca
gatgattttgcccaactgcaggctaataaaatgagtgagttcttactctatgagtctggc
accttctctgcccctccaacccgcccatcatgtgatctctgcacacgttggttcctgttc
acttctgccatgagtggaagtagcccaagtccctccacagaagcagatgtgctccttgta
cagcctgcagaacctgcaaaaaagcttgccagggcctgcagaaagcgccgcgactgcgag
gctgacacgcgtctttccttccctcccccggggaatgatcccagcatctctcgcagtgat
catcagcaccggaggcggcggctgcagcagcagcagcaacaagtcgggacttttagagta
atgcaacagaaggcttttgaggaaagcagatatccctggcaggagtcctttgagaatgtt
gctgtgtgcctgccattacgctgcccgaggtgtggagaccataccagatttagaagcttg
tcatccttgagggcccatctggagttcagtcacagctacgaagaaagaaccctcttgaca
aaatgcagtctctttccatccctcaaagacacagacctagtcacttcctcagaactcctg
aaaccgggaaaattgcagagcagtggcaacgtggtaaagcagaaaccgagctatgttaac
ttgtacagcatttcacatgaacattccaaggacaggaagccatttgaggtggtggcagag
aggcctgtgtcctatgtgcagacctacactgccatggacctccatgcagactcgctggat
gggacacggtcgggtcctggactgcccacctcagacaccaaagcttctttcgaggcacat
gtcagagaaaaattcaatcgaatggttgaggctgtggataggaccattgagaagagaatt
gataaactcaccaaagagttggcccagaaaactgcggaactgttggaagttcgggcagct
tttgtgcagctgactcagaaaaagcaggaagttcagagacgagagcgggccttaaacaga
caggtggacgtggccgtggaaatgatagctgtactgaggcaacgcctgacggaatctgag
gaggagcttcttaggaaagaagaagaagttgtcacattcaaccatttcctggaagcggca
gctgagaaggaggttcaagggaaagcccggctccaggactttattgagaatctgttacag
cgggtagaactggcggagaagcagcttgagtactatcagagccagcaggcctctggcttt
gtccgtgatctcagcgggcacgtggtgagtcaccccgggccagccaccgagtgtaagatc
cctgtggttggtgagaatgggctgaggacagagaaaagggagctgggtgacttgcaggga
ctctctagacatcatttgagagcactgcctgggccatgcctgtattgtggaaatgttact
ggggagtccaggacgcctggaagtaagggaaggaaccacctgaaaaaggccaaggatgac
agagccagcatgcagcctgccaaggccattcacgaacaggctgagtcctcaagagacctc
tgcagacctccaaagaaaggggagctcctggggtttggccgcaaaggcaacatcaggccc
aaaatggctaaaaaaaagccaacagccattgtgaacatcatctaa

>gi568815588f:62276194_62499786|GENSCAN_predicted_peptide_5|52_aa
MAKARHHSIYFPDEETGPTVKADPTQREDNDDEVLYDDPLPLNEYNCIFSSL

>gi568815588f:62276194_62499786|GENSCAN_predicted_CDS_5|159_bp
atggccaaggcaagacatcattctatctattttccagatgaggaaactggacccacagtc
aaagcagatcccacccaacgtgaagacaatgacgatgaagtcctctatgatgatccactt
ccacttaatgaatataactgtatcttctcttccttatga

>gi568815588f:62276194_62499786|GENSCAN_predicted_peptide_6|378_aa
MTNIIALTKFLLLVEQSQLTEKANDGRTTNWDLVRSSPVADMVSIIGIYQVQRAYESLRF
LSNLGDYGSVAQFELLVHGLSDVASRVFMAWQRQKAWLSLFPGVTCSVEGAWLQFTSGYR
HSLSGPTQLNNAHHCFQKGFPCVWCRPVEAAPQQHPADATASSELEHASQPPTFQTGGLS
WSWKGAGEARLVCQNDLELEKYERAGLKDKYTSPLWEMGFFKGQFNQLSQGVLSHVGQEP
SAGGAVPGISKLSGATAFPLSVQTLVPAVAVTWGMQPHMKPVPVLAPGAAHSAAAAASMG
SGPVARAEHSLLGCVGETSPAGVSKTQAEALLAIEVSGWSVSGVAFRKILPDFSILIGNL
KYNNLAFTMKVQLQVLKK

>gi568815588f:62276194_62499786|GENSCAN_predicted_CDS_6|1137_bp
atgaccaacatcattgcacttactaagttcctgcttcttgttgagcagagccaattaact
gaaaaagctaatgatggaaggacaaccaattgggatctagtaagatctagccctgtagct
gatatggtgtctattataggtatctaccaagtgcagagggcttacgaaagtctaagattc
ctttcaaatctaggagactatggatctgttgctcaatttgagctgctcgttcatggcttg
tctgatgtggcctccagggtcttcatggcttggcagcgacaaaaagcttggctctcactc
ttccctggtgtgacttgttctgtggagggggcttggctacagttcactagtggttaccga
cattccctctctggccccacccagctcaataatgcccatcattgtttccaaaagggcttc
ccctgtgtctggtgcagacctgtagaggcagctccacagcagcatccagctgacgccaca
gcctcctcagagctggagcatgcttcccaaccaccaacattccaaactggaggattgtca
tggagctggaaaggtgctggcgaagctcgcctggtgtgccaaaatgacctggaattggag
aaatatgagcgagcaggccttaaagacaagtacacatctccactgtgggagatgggattc
tttaaagggcagtttaatcagctttcgcagggcgttctatcacacgtgggccaagagcct
agcgctggaggagctgttcctggcatctccaagctttcaggtgccactgcattccccttg
tctgtccagaccctggtgcctgcagtggcagtcacttggggcatgcagcctcacatgaag
ccagtgcctgtgctggcacctggagctgcccactctgctgcagcagctgcaagtatggga
tctgggccagtagcacgggccgagcacagcctgctgggctgtgtgggtgagacaagccca
gcaggagtaagcaaaacccaagcagaggcactgctggccatagaggtttctggctggtct
gtttcaggtgtggccttccgaaagattttgccagatttctccattctgattggaaacctc
aaatacaacaatctggctttcacaatgaaggtccaactgcaggtgctcaaaaaatga