(Linear) (Six-base) MAPSORT of: KIAA0736.seq Check: 529 from: 1 to: 2226 KIAA0736.orf With 182 enzymes: SgfI * October 24, 2006 15:13 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 2205 2226 Size: 2205 21 AccI GT'mk_AC Cuts at: 0 632 1790 2226 Size: 632 1158 436 Fragments arranged by size: 1158 632 436 Acc65I G'GTAC_C Cuts at: 0 1247 2226 Size: 1247 979 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1141 2212 2226 Size: 1141 1071 14 Fragments arranged by size: 1141 1071 14 AfeI AGC'GCT Cuts at: 0 576 1255 2226 Size: 576 679 971 Fragments arranged by size: 971 679 576 AflIII A'CryG_T Cuts at: 0 587 1628 2009 2226 Size: 587 1041 381 217 Fragments arranged by size: 1041 587 381 217 AleI CACnn'nnGTG Cuts at: 0 1453 2226 Size: 1453 773 AlwNI CAG_nnn'CTG Cuts at: 0 316 702 2220 2226 Size: 316 386 1518 6 Fragments arranged by size: 1518 386 316 6 ApoI r'AATT_y Cuts at: 0 1299 2226 Size: 1299 927 AvaI C'yCGr_G Cuts at: 0 305 1462 2207 2226 Size: 305 1157 745 19 Fragments arranged by size: 1157 745 305 19 AvrII C'CTAG_G Cuts at: 0 1278 2226 Size: 1278 948 BanI G'GyrC_C Cuts at: 0 348 1247 1777 2226 Size: 348 899 530 449 Fragments arranged by size: 899 530 449 348 BanII G_rGCy'C Cuts at: 0 1050 1072 2226 Size: 1050 22 1154 Fragments arranged by size: 1154 1050 22 BbeI G_GCGC'C Cuts at: 0 352 2226 Size: 352 1874 BbsI GAAGACnn'nnnn_ Cuts at: 0 723 819 996 2226 Size: 723 96 177 1230 Fragments arranged by size: 1230 723 177 96 BbvCI CC'TCA_GC Cuts at: 0 2157 2226 Size: 2157 69 BglI GCCn_nnn'nGGC Cuts at: 0 1045 1973 2226 Size: 1045 928 253 Fragments arranged by size: 1045 928 253 BglII A'GATC_T Cuts at: 0 275 2226 Size: 275 1951 BmgBI CAC'GTC Cuts at: 0 1758 2010 2226 Size: 1758 252 216 Fragments arranged by size: 1758 252 216 BmrI ACTGGGnnnn_n' Cuts at: 0 176 2226 Size: 176 2050 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 676 2226 Size: 676 1550 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 380 1017 1408 1875 2226 Size: 380 637 391 467 351 Fragments arranged by size: 637 467 391 380 351 Bpu10I CC'TnA_GC Cuts at: 0 56 1163 2157 2226 Size: 56 1107 994 69 Fragments arranged by size: 1107 994 69 56 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 396 1293 1546 2226 Size: 396 897 253 680 Fragments arranged by size: 897 680 396 253 BsaI GGTCTCn'nnnn_ Cuts at: 0 11 2197 2226 Size: 11 2186 29 Fragments arranged by size: 2186 29 11 BsaBI GATnn'nnATC Cuts at: 0 1222 2104 2226 Size: 1222 882 122 Fragments arranged by size: 1222 882 122 BsaHI Gr'CG_yC Cuts at: 0 349 2226 Size: 349 1877 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 684 714 2226 Size: 684 30 1512 Fragments arranged by size: 1512 684 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 163 166 215 235 2226 Size: 163 3 49 20 1991 Fragments arranged by size: 1991 163 49 20 3 BseYI C'CCAG_C Cuts at: 0 571 684 1256 2094 2226 Size: 571 113 572 838 132 Fragments arranged by size: 838 572 571 132 113 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1629 1714 2123 2226 Size: 1629 85 409 103 Fragments arranged by size: 1629 409 103 85 BsiEI CG_ry'CG Cuts at: 0 486 2226 Size: 486 1740 BsmI GAATG_Cn' Cuts at: 0 299 1883 2004 2073 2226 Size: 299 1584 121 69 153 Fragments arranged by size: 1584 299 153 121 69 Bsp1286I G_dGCh'C Cuts at: 0 1050 1072 2226 Size: 1050 22 1154 Fragments arranged by size: 1154 1050 22 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1116 1278 2205 2226 Size: 1116 162 927 21 Fragments arranged by size: 1116 927 162 21 BsrBI CCG'CTC Cuts at: 0 333 2226 Size: 333 1893 BsrDI GCAATG_nn' Cuts at: 0 50 1985 2226 Size: 50 1935 241 Fragments arranged by size: 1935 241 50 BsrFI r'CCGG_y Cuts at: 0 680 2226 Size: 680 1546 BstAPI GCAn_nnn'nTGC Cuts at: 0 702 2220 2226 Size: 702 1518 6 Fragments arranged by size: 1518 702 6 BstXI CCAn_nnnn'nTGG Cuts at: 0 87 2226 Size: 87 2139 BstYI r'GATC_y Cuts at: 0 275 1223 1511 2226 Size: 275 948 288 715 Fragments arranged by size: 948 715 288 275 BstZ17I GTA'TAC Cuts at: 0 1791 2226 Size: 1791 435 BtgI C'CryG_G Cuts at: 0 36 480 2226 Size: 36 444 1746 Fragments arranged by size: 1746 444 36 BtsI GCAGTG_nn' Cuts at: 0 703 1436 1826 2226 Size: 703 733 390 400 Fragments arranged by size: 733 703 400 390 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 2037 2072 2226 Size: 2037 35 154 Fragments arranged by size: 2037 154 35 EaeI y'GGCC_r Cuts at: 0 77 477 483 1946 2226 Size: 77 400 6 1463 280 Fragments arranged by size: 1463 400 280 77 6 EagI C'GGCC_G Cuts at: 0 483 2226 Size: 483 1743 EarI CTCTTCn'nnn_ Cuts at: 0 781 1589 2226 Size: 781 808 637 Fragments arranged by size: 808 781 637 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 1405 2226 Size: 1405 821 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 380 1017 1141 1408 1875 2212 2226 Size: 380 637 124 267 467 337 14 Fragments arranged by size: 637 467 380 337 267 124 14 EcoO109I rG'GnC_Cy Cuts at: 0 96 209 391 1241 2226 Size: 96 113 182 850 985 Fragments arranged by size: 985 850 182 113 96 HaeII r_GCGC'y Cuts at: 0 352 526 578 1257 2226 Size: 352 174 52 679 969 Fragments arranged by size: 969 679 352 174 52 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 684 716 800 832 1185 1213 1217 1245 Size: 684 32 84 32 353 28 4 28 Cuts at: 1245 1404 1426 1436 1458 1603 1635 2226 Size: 159 22 10 22 145 32 591 Fragments arranged by size: 684 591 353 159 145 84 32 32 32 28 28 22 22 10 4 HincII GTy'rAC Cuts at: 0 723 2015 2226 Size: 723 1292 211 Fragments arranged by size: 1292 723 211 KasI G'GCGC_C Cuts at: 0 348 2226 Size: 348 1878 KpnI G_GTAC'C Cuts at: 0 1251 2226 Size: 1251 975 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 623 629 670 1211 1481 2226 Size: 623 6 41 541 270 745 Fragments arranged by size: 745 623 541 270 41 6 MscI TGG'CCA Cuts at: 0 479 2226 Size: 479 1747 MslI CAynn'nnrTG Cuts at: 0 646 1342 1453 2226 Size: 646 696 111 773 Fragments arranged by size: 773 696 646 111 MspA1I CmG'CkG Cuts at: 0 922 995 2089 2161 2226 Size: 922 73 1094 72 65 Fragments arranged by size: 1094 922 73 72 65 NarI GG'CG_CC Cuts at: 0 349 2226 Size: 349 1877 NspI r_CATG'y Cuts at: 0 76 591 618 894 1146 1483 2226 Size: 76 515 27 276 252 337 743 Fragments arranged by size: 743 515 337 276 252 76 27 PasI CC'CwG_GG Cuts at: 0 397 2226 Size: 397 1829 PciI A'CATG_T Cuts at: 0 587 2226 Size: 587 1639 PflMI CCAn_nnn'nTGG Cuts at: 0 1431 2226 Size: 1431 795 PfoI T'CCnGG_A Cuts at: 0 110 1993 2226 Size: 110 1883 233 Fragments arranged by size: 1883 233 110 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1156 1188 2226 Size: 1156 32 1038 Fragments arranged by size: 1156 1038 32 PpuMI rG'GwC_Cy Cuts at: 0 209 391 1241 2226 Size: 209 182 850 985 Fragments arranged by size: 985 850 209 182 PstI C_TGCA'G Cuts at: 0 2225 2226 Size: 2225 1 PvuII CAG'CTG Cuts at: 0 922 995 2089 2161 2226 Size: 922 73 1094 72 65 Fragments arranged by size: 1094 922 73 72 65 SanDI GG'GwC_CC Cuts at: 0 209 391 2226 Size: 209 182 1835 Fragments arranged by size: 1835 209 182 ScaI AGT'ACT Cuts at: 0 1531 2226 Size: 1531 695 SexAI A'CCwGG_T Cuts at: 0 1243 2226 Size: 1243 983 SfcI C'TryA_G Cuts at: 0 2221 2226 Size: 2221 5 SfoI GGC'GCC Cuts at: 0 350 2226 Size: 350 1876 SmaI CCC'GGG Cuts at: 0 307 1464 2209 2226 Size: 307 1157 745 17 Fragments arranged by size: 1157 745 307 17 SmlI C'TyrA_G Cuts at: 0 375 1272 1561 2226 Size: 375 897 289 665 Fragments arranged by size: 897 665 375 289 SphI G_CATG'C Cuts at: 0 76 618 2226 Size: 76 542 1608 Fragments arranged by size: 1608 542 76 SspI AAT'ATT Cuts at: 0 121 2226 Size: 121 2105 StuI AGG'CCT Cuts at: 0 623 1108 2226 Size: 623 485 1118 Fragments arranged by size: 1118 623 485 StyI C'CwwG_G Cuts at: 0 1278 2132 2172 2226 Size: 1278 854 40 54 Fragments arranged by size: 1278 854 54 40 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 944 1342 2157 2226 Size: 944 398 815 69 Fragments arranged by size: 944 815 398 69 TatI w'GTAC_w Cuts at: 0 1529 1688 1720 2226 Size: 1529 159 32 506 Fragments arranged by size: 1529 506 159 32 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 891 923 2226 Size: 891 32 1303 Fragments arranged by size: 1303 891 32 Tth111I GACn'n_nGTC Cuts at: 0 106 2226 Size: 106 2120 XmaI C'CCGG_G Cuts at: 0 305 1462 2207 2226 Size: 305 1157 745 19 Fragments arranged by size: 1157 745 305 19 Enzymes that do cut: AarI AccI Acc65I AcuI AfeI AflIII AleI AlwNI ApoI AvaI AvrII BanI BanII BbeI BbsI BbvCI BglI BglII BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaBI BsaHI BsaXI BseRI BseYI BsgI BsiEI BsmI Bsp1286I BspMI BsrBI BsrDI BsrFI BstAPI BstXI BstYI BstZ17I BtgI BtsI CspCI EaeI EagI EarI EciI Eco57MI EcoO109I HaeII Hin4I HincII KasI KpnI MmeI MscI MslI MspA1I NarI NspI PasI PciI PflMI PfoI PpiI PpuMI PstI PvuII SanDI ScaI SexAI SfcI SfoI SmaI SmlI SphI SspI StuI StyI TaqII TatI TstI Tth111I XmaI Enzymes that do not cut: AatII AclI AflII AgeI AhdI AlfI AloI ApaI ApaLI AscI AseI AsiSI BaeI BamHI BcgI BciVI BclI BfrBI BlpI Bme1580I BmtI BsaAI BsaWI BsiHKAI BsiWI BsmBI BspEI BspHI BsrGI BssHII BssSI BstBI BstEII Bsu36I BtgZI ClaI DraI DraIII DrdI EcoICRI EcoNI EcoRI EcoRV FalI FseI FspI FspAI HindIII HpaI MfeI MluI NaeI NcoI NdeI NgoMIV NheI NotI NruI NsiI PacI PmeI PmlI PshAI PsiI PspOMI PspXI PsrI PvuI RsrII SacI SacII SalI SapI SbfI SfiI SgfI SgrAI SnaBI SpeI SrfI SwaI XbaI XcmI XhoI XmnI ZraI