GENSCAN 1.0	Date run:  3-Nov-116	Time: 02:46:39

Sequence gi568815590f:22904435_23117466 : 213032 bp : 46.74% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -    246    241    6                               1.05
 1.11 Term -    686    577  110  0  2   72   28    72 0.083  -1.73
 1.10 Intr -   1446   1286  161  2  2   82   71    46 0.077   1.93
 1.09 Intr -   4802   4642  161  2  2   54   41    96 0.269   0.29
 1.08 Intr -  15876  15750  127  2  1  102   86   112 0.833  13.08
 1.07 Intr -  23286  23150  137  0  2   92  100   113 0.098  12.27
 1.06 Intr -  23941  23905   37  0  1   75   10    31 0.030  -7.74
 1.05 Intr -  25148  24875  274  0  1   68   50   170 0.063   7.80
 1.04 Intr -  47844  47775   70  0  1  107   75    41 0.333   3.45
 1.03 Intr -  53191  53111   81  1  0   55   75    55 0.217   0.73
 1.02 Intr -  57197  57144   54  2  0   78   75    71 0.267   3.98
 1.01 Init -  68666  68409  258  2  0   97   42   123 0.021   5.74
 1.00 Prom -  68751  68712   40                              -5.06

 2.00 Prom +  74515  74554   40                              -4.16
 2.01 Init +  82364  82487  124  1  1   81   99    31 0.703   2.83
 2.02 Intr +  83058  83129   72  1  0  134  111    36 0.830   9.88
 2.03 Intr +  93266  93336   71  0  2  108   90    45 0.002   5.60
 2.04 Intr +  93429  93454   26  2  2   50   98    29 0.001  -3.08
 2.05 Intr +  99991 100192  202  1  1  148   94   244 0.985  30.29
 2.06 Intr + 100938 101041  104  2  2  117   75   142 0.999  14.77
 2.07 Intr + 101526 101711  186  0  0  120   63   188 0.999  18.30
 2.08 Intr + 102294 103312 1019  0  2   26   80  1577 0.999 141.00
 2.09 Intr + 103559 103677  119  0  2   87   94   182 0.999  18.88
 2.10 Intr + 106104 106254  151  2  1  129   93   233 0.999  27.64
 2.11 Intr + 110256 110344   89  1  2   96   69   165 0.999  15.09
 2.12 Intr + 111204 111309  106  2  1   94   99   204 0.992  21.89
 2.13 Term + 112818 113035  218  1  2   88   50   241 0.993  17.61
 2.14 PlyA + 113911 113916    6                              -0.45

 3.16 PlyA - 115725 115720    6                              -1.75
 3.15 Term - 118220 118075  146  0  2   76   32    56 0.598  -3.13
 3.14 Intr - 118550 118263  288  0  0   76   90   286 0.688  24.82
 3.13 Intr - 119826 119754   73  0  1   91   89    21 0.842   1.48
 3.12 Intr - 122854 122699  156  1  0  100  105   134 0.989  16.51
 3.11 Intr - 123319 123288   32  2  2  101   70    45 0.989   1.85
 3.10 Intr - 124007 123897  111  0  0  118   96    56 0.972   9.75
 3.09 Intr - 124168 124095   74  0  2   84   87    45 0.950   3.05
 3.08 Intr - 125287 125176  112  2  1   53   76   148 0.990   9.54
 3.07 Intr - 126438 126325  114  1  0  115   92   -10 0.662   2.52
 3.06 Intr - 133419 133314  106  0  1   85   79    85 0.953   7.09
 3.05 Intr - 145613 145405  209  0  2   80   68    82 0.074   4.20
 3.04 Intr - 164508 164317  192  1  0   53   97    92 0.336   6.06
 3.03 Intr - 166434 166300  135  1  0   74   66    60 0.456   2.94
 3.02 Intr - 167991 167685  307  0  1   82   97   158 0.933  12.12
 3.01 Init - 168101 168081   21  2  0   82  100     5 0.903   0.81
 3.00 Prom - 173912 173873   40                              -3.86

 4.00 Prom + 177191 177230   40                              -7.46
 4.01 Init + 177731 177841  111  1  0   59   42    89 0.224  -0.35
 4.02 Intr + 180002 180111  110  1  2   60  109    92 0.356   7.58
 4.03 Intr + 180280 180382  103  1  1   50   72    69 0.758   1.68
 4.04 Term + 186854 186922   69  1  0  138   47    55 0.933   4.34
 4.05 PlyA + 187664 187669    6                               1.05

 5.02 PlyA - 189616 189611    6                               1.05
 5.01 Sngl - 191530 191381  150  1  0   98   42   148 0.855   5.37
 5.00 Prom - 192337 192298   40                              -6.16

 6.00 Prom + 198451 198490   40                              -3.46
 6.01 Init + 198568 198747  180  0  0   62   81   190 0.610  14.91
 6.02 Intr + 207286 207391  106  0  1  134   55    55 0.980   6.59
 6.03 Intr + 210223 210336  114  2  0  123   92    23 0.731   6.62
 6.04 Intr + 211074 211182  109  1  1   37   94   103 0.854   5.14
 6.05 Term + 212207 212597  391  2  1  115   48   322 0.965  25.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  95388  95245  144  0  0   31   86   234 0.995  15.62
S.002 Init +  96710  96756   47  1  2   62   64    49 0.819   0.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:22904435_23117466|GENSCAN_predicted_peptide_1|489_aa
MTFLNRRLLRTGSKVEKHQPGQGKGVKAGEVPGKGGYACAKAQGPGGEHAFPGNCTHRRM
AARQIQKGRRRDEAEKEKEGHIWKGLLFVNIVSVMSGINDVPYEFICISLLGHKNKQPNP
QFGPGTHMLPQVVQLVPPQAELGCTMAIVSRYSPDGVIIVPISKDWHEDSEIKVPGTWSK
EEPPLEVGSTAATCTVGSPFFQAAITVLKELTPRKVETSLVDAIWKMSFLVLGSPSGSIS
LAVAVLWPFGAGPSELASVPMGWTMRLVTAALLLGLMMVVTGDEDENSPCAHEALLDEDT
LFCQGLEVFYPELGNIGCKVVPDCNNYRQKITSWMEPIVKFPGAVDASLAGRRRSPSISR
GCNGKSRHQGEIGDRHPTPGTCELAEWLGPPMQEGIAEGRWETGPREVYLFQYVIVEQLF
PPPRSSFPFTSNIPGPRGEEPARLRPVRWEQQAEYTPQAKVQIASTFLDESDDSIMPIKV
ISMSIVFEQ

>gi568815590f:22904435_23117466|GENSCAN_predicted_CDS_1|1470_bp
atgactttcctgaacaggagacttctgagaacaggcagcaaggttgagaagcaccagcca
ggtcaggggaagggagtgaaggctggagaagttcccggcaagggaggctatgcctgtgca
aaggcgcaggggcctggtggagagcatgccttcccgggaaactgcacccatcgcaggatg
gctgcacggcagattcagaaaggcaggaggagggatgaagccgagaaggaaaaagaaggc
catatctggaagggccttctctttgtgaatatcgtttcagtgatgtctggcatcaatgat
gtaccttacgagttcatctgcatctcgttattgggccacaagaacaagcagcccaaccct
cagtttggtccaggaacacacatgctgccccaggtggttcagctggtgccaccacaagca
gaactaggttgtacaatggccattgtttcaagatactcgccagatggggtgataatagtg
cctatttccaaggattggcatgaggattcggagataaaagtgcctggcacgtggagtaag
gaagaaccgccactggaagtgggctcaacagcagcaacctgcactgtgggctctcccttc
ttccaggccgccatcactgtgctaaaggagttgacacccagaaaagttgagacttctcta
gtggatgccatttggaagatgagtttcttggtcttgggcagcccttctggcagcatctcc
ttggctgtggctgtcctctggcccttcggagctggcccttcggagctggcctcggtgccc
atgggttggacaatgaggctggtcacagcagcactgttactgggtctcatgatggtggtc
actggagacgaggatgagaacagcccgtgtgcccatgaggccctcttggacgaggacacc
ctcttttgccagggccttgaagttttctacccagagttggggaacattggctgcaaggtt
gttcctgattgtaacaactacagacagaagatcacctcctggatggagccgatagtcaag
ttcccgggggccgtggacgcctcgctggcgggtaggcggagatcgccctctatctcccgg
ggctgcaatgggaagagccgacaccagggggagataggtgaccgtcatcctaccccagga
acctgtgagctggctgagtggctggggccaccaatgcaggaaggcattgcagagggcaga
tgggaaacagggccacgtgaggtgtacctttttcagtatgttatcgtggaacagctattt
cctcctcctcgttcatcttttccattcaccagcaacatcccagggccccgtggagaggaa
cctgccaggctgagacctgtgaggtgggagcagcaggcagagtatacaccgcaggcaaaa
gtacaaattgcttcaacttttctagatgaatctgatgattcaataatgcctatcaaagtc
attagcatgtccattgtgtttgagcagtaa

>gi568815590f:22904435_23117466|GENSCAN_predicted_peptide_2|828_aa
MASLDFTLDQSCFTCLPAGQPRMSGHCEPIAFLLFVFYLCADLVENTTSGQGIVTGQQSP
RGEVAGAMVLPGQVKGDVNWHLAFSWSLEGLFGTQKMGSRLMDSDMDYERPNVETIKCVV
VGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVS
LRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVG
CQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDV
FDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHL
LEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSEPGGTHPEDH
QGHSDQHHHHHHHHHGRDFLLRAASFDVCESVDEAGGSGPAGLRASTSDGILRGNGTGYL
PGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMVVVKMDSSIQPGPFRAVLKYLYTGELD
ENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFHVRRTNRVKECLAKGTF
SDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRAVLEYLY
TGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELA
QFHCAYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQ
RARKEREKEDYLHLKRQPKRRWLFWNSPSSPSSSAASSSSPSSSSAVV

>gi568815590f:22904435_23117466|GENSCAN_predicted_CDS_2|2487_bp
atggccagtctagattttacactagatcagtcctgcttcacatgtctcccggctggccag
ccccggatgtccggccactgtgagccgatagcttttctgctgtttgttttctacctgtgt
gcagacctggtcgagaacactacttcaggacagggaatagtgacaggccagcagagcccc
agaggcgaggtggcaggggctatggtcctgccaggacaggtgaaaggtgatgtcaactgg
catctggcattcagctggtctctggaggggctctttggcacacagaagatggggtcccgt
ttaatggattctgacatggattatgaaaggccaaacgtagagaccatcaagtgcgttgtg
gtgggggacaacgccgtgggtaagaccaggctcatctgtgcccgcgcttgcaatgccacc
ctcacccagtaccagctgctggccacgcatgtgcccacagtatgggccatcgaccaatat
cgtgtgtgccaggaggtgctggaacgctcccgagacgtggtagatgatgtcagcgtctct
ctgcgcctctgggacacctttggagaccaccacaaagaccgtcgctttgcttatgggaga
tctgatgtggtggttctgtgcttctccattgccaaccccaattccctccaccatgtcaag
accatgtggtacccagaaatcaagcacttctgcccccgagcacctgtcatcttggtgggc
tgccagttggacctgcgctacgctgacctggaggctgtcaacagggctaggcgacccttg
gctaggcccatcaaacctaatgaaatcctgcccccagagaagggtcgggaggtggccaag
gagctgggcatcccctactatgagaccagcgtggtggcccagttcggcatcaaggacgtc
tttgacaacgccatccgagctgcactcatctcccgccgccacctgcagttctggaagtcc
cacctccgcaatgtgcagcggcctctgctgcaggcacccttcctaccccccaagccaccg
cccccgatcatcgtggtgcccgaccctccctccagcagcgaggagtgccccgcccacctc
ctggaggacccgctctgcgcggacgtcatcctggtgctgcaggagcgggtgcgcatcttt
gcccacaagatctacctctccacctcttcctccaagttctatgacctgttcctcatggac
ctgagtgagggggagctggggggcccctcggagccagggggcacccacccagaggaccac
cagggccactctgatcaacaccaccaccatcaccaccaccaccatgggcgagacttcctg
ctccgagcagccagctttgacgtgtgcgagagcgtggatgaggctgggggctccggtcct
gctggcctccgtgcttccaccagcgacgggatcttacggggcaacggaacagggtaccta
ccgggcaggggtcgtgtgctgtcttcctggagccgagcttttgtgagcatccaggaagag
atggcagaagatcctctcacctacaaatcccggctgatggtggtggtgaagatggacagt
tccatccagccggggcccttccgggctgtcctcaagtacctgtacacgggggagctagat
gagaacgagcgtgacctcatgcacattgcccacattgctgagctgctcgaggtctttgat
ctgcgcatgatggtggccaacattctcaacaatgaggccttcatgaaccaggagatcacc
aaggccttccacgtccgccggaccaaccgggttaaggagtgcttggcaaaaggcaccttc
tcagatgtgaccttcatcctggatgatggcaccatcagcgcccacaagcccctgttgatt
tccagctgtgactggatggctgccatgtttggggggccatttgtggagagctccacccgg
gaggtggtgtttccctacacaagcaagagctgcatgcgggccgtgctggaatacctctac
accggcatgttcacctccagccccgacctggatgacatgaagctcatcattctagccaac
cgcctctgcctgccacacctggttgccctcacagagcagtacacagtgaccgggctgatg
gaagcgacccagatgatggtggacatcgatggggacgtccttgtgttcctggaactggct
cagttccactgtgcgtaccagctggccgactggtgtctccaccacatctgcaccaactac
aacaacgtgtgccgcaagttcccccgagacatgaaggccatgtccccagaaaaccaggag
tatttcgagaagcatcggtggccacctgtgtggtacctgaaggaggaagatcattaccag
cgggcacggaaggagcgtgagaaggaggactacctccacctcaagcggcagcccaaacgg
cgttggctcttctggaacagtccatcctccccgtcttcctcggcagcctcctcctcatcc
ccatcttcctcctcggctgtggtctga

>gi568815590f:22904435_23117466|GENSCAN_predicted_peptide_3|691_aa
MAAIIQKVVRKIHYMKMCSLWLGAGHQLPNSTGSGHGTVSTVPIPNLEARASLPCHFWMQ
DREPELGLWSLSRGCEQPSVATRIETFPAHSSNWGTGWVPNRKTIGRVAAGASPTSTSPC
SRAPSPIDHPRAEECGRTAREHGAGLAGSSTCNPGLKPTGLRDYKSVPYRHGTTGTERPG
RFGGPEKARPRTQGGAGSQAWAPGPQDPCARCRRGPAVVEKGTCRFAHKQPSGGSPGETS
PDSCWDPPEDCLIASYQPLNAALSLSSGWRLFCSQTKLRVGLPNNEMQIPGHMNPSNGRS
NRMYWRIIQSIDSLLENLVAALQGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCD
SGEVELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVH
KESGIIIGVTVAAVVLIVAVFVCKSLLWKKVLPYLKGICSGGGGDPERVDRSSQRPGAED
NVLNEIVSILQPTQVPEQEMEVQEPAEPTGVNMLSPGESEHLLEPAEAERSQRRRLLVPA
NEGDPTETLRQCFDDFADLVPFDSWEPLMRKLGLMDNEIKVAKAEAAGHRDTLYTMLIKW
VNKTGRDASVHTLLDALETLGERLAKQKIEDHLLSSGKFMYLEGSQTFPGLPFFWKKPNW
TPVSRKVPQLSHDRYWKKLSHPTSPSGWNIL

>gi568815590f:22904435_23117466|GENSCAN_predicted_CDS_3|2076_bp
atggctgctattatacagaaggttgttaggaaaatccactacatgaagatgtgcagtctc
tggctgggagcaggacaccagctgcccaacagcacaggctcagggcatggcactgtctcc
actgtccccatccccaacctggaagctagagcctcgctgccctgccacttctggatgcag
gacagagaaccggaactgggactgtggtctctcagtagaggctgtgaacagccatctgtg
gccacacggattgagacctttcctgctcactcttcaaactggggcaccggctgggtgccc
aacagaaagacaattggaagagtggcagccggagcctccccgacgagcacctccccctgc
tccagggcgcccagtcccatcgaccacccaagggctgaggagtgcgggcgcacggcgcgg
gagcacggcgcgggactggcaggcagctccacctgcaaccccgggctgaaacccacgggc
ctgagagactataagagcgttccctaccgccatggaacaacggggacagaacgccccggc
cgcttcgggggcccggaaaaggcacggcccaggacccagggaggcgcggggagccaggcc
tgggccccgggtccccaagacccttgtgctcgttgtcgccgcggtcctgctgttgtagag
aaagggacgtgtagatttgcacataaacagccctctggagggtcccctggggaaacctca
cctgacagctgctgggatcctcctgaagactgtctcatcgcaagctaccagccgctgaac
gcggcactgtccttatcttctggctggcgacttttttgttcccagaccaaactgagggtg
gggctgcccaataatgagatgcagattcctggacacatgaatcctagcaatggaagaagc
aaccgcatgtattggaggataattcagagcatagacagtctcctggagaaccttgttgca
gcccttcaaggacaccatatctcagaagacggtagagattgcatctcctgcaaatatgga
caggactatagcactcactggaatgacctccttttctgcttgcgctgcaccaggtgtgat
tcaggtgaagtggagctaagtccctgcaccacgaccagaaacacagtgtgtcagtgcgaa
gaaggcaccttccgggaagaagattctcctgagatgtgccggaagtgccgcacagggtgt
cccagagggatggtcaaggtcggtgattgtacaccctggagtgacatcgaatgtgtccac
aaagaatcaggcatcatcataggagtcacagttgcagccgtagtcttgattgtggctgtg
tttgtttgcaagtctttactgtggaagaaagtccttccttacctgaaaggcatctgctca
ggtggtggtggggaccctgagcgtgtggacagaagctcacaacgacctggggctgaggac
aatgtcctcaatgagatcgtgagtatcttgcagcccacccaggtccctgagcaggaaatg
gaagtccaggagccagcagagccaacaggtgtcaacatgttgtcccccggggagtcagag
catctgctggaaccggcagaagctgaaaggtctcagaggaggaggctgctggttccagca
aatgaaggtgatcccactgagactctgagacagtgcttcgatgactttgcagacttggtg
ccctttgactcctgggagccgctcatgaggaagttgggcctcatggacaatgagataaag
gtggctaaagctgaggcagcgggccacagggacaccttgtacacgatgctgataaagtgg
gtcaacaaaaccgggcgagatgcctctgtccacaccctgctggatgccttggagacgctg
ggagagagacttgccaagcagaagattgaggaccacttgttgagctctggaaagttcatg
tatctagaaggaagtcagaccttccctggtttaccttttttctggaaaaagcccaactgg
actccagtcagtaggaaagtgccacaattgtcacatgaccggtactggaagaaactctcc
catccaacatcacccagtggatggaacatcctgtaa

>gi568815590f:22904435_23117466|GENSCAN_predicted_peptide_4|130_aa
MGGEILPLWEALTTFQFSLLRPETGPGFDDWQLLKGPRETRLSSHRLLSPDDQVPGVIKE
QPLSCVEKAMETARRCQKTRSPDNLSSERAENPPGEYGGTLQREKAKWVSCHSVTNLILL
STAINSTFNT

>gi568815590f:22904435_23117466|GENSCAN_predicted_CDS_4|393_bp
atgggaggagaaatcctccctctgtgggaggcactgactacattccagttctccctccta
cgcccagagactggaccagggtttgatgactggcaacttctcaaggggccgcgtgagact
cgcttgtcctcccaccgcctgctctctcctgatgaccaggttccaggagttatcaaagaa
cagcctctgagctgcgtggagaaagccatggagacagccaggcgctgccagaagacaagg
tcaccagataatctgtcctcagagagggctgagaacccacccggggagtatggaggaacc
ctacagagggagaaagcaaaatgggtctcttgccactcagttactaacctgattcttctc
tccacggccatcaactcgacttttaatacatga

>gi568815590f:22904435_23117466|GENSCAN_predicted_peptide_5|49_aa
MAEGDGEAGTFFTRRQEKEKRVKEELPNPYKTIRSRENYHENSMRKPPP

>gi568815590f:22904435_23117466|GENSCAN_predicted_CDS_5|150_bp
atggcggaaggagatggggaagctggcaccttcttcacaaggcggcaggagaaagagaag
agagtgaaggaggaactgccaaacccttataaaaccatcagaagtcgcgagaactatcat
gagaacagcatgaggaaaccacccccatga

>gi568815590f:22904435_23117466|GENSCAN_predicted_peptide_6|299_aa
MQGVKERFLPLGNSGDRAPRPPDGRGRVRPRTQDGVGNHTMARIPKTLKFVVVIVAVLLP
VLAYSATTARQEEVPQQTVAPQQQRHSFKGEECPAGSHRSEHTGACNPCTEGVDYTNASN
NEPSCFPCTVCKSDQKHKSSCTMTRDTVCQCKEGTFRNENSPEMCRKCSRCPSGEVQVSN
CTSWDDIQCVEEFGANATVETPAAEETMNTSPGTPAPAAEETMNTSPGTPAPAAEETMTT
SPGTPAPAAEETMTTSPGTPAPAAEETMITSPGTPASSHYLSCTIVGIIVLIVLLIVFV

>gi568815590f:22904435_23117466|GENSCAN_predicted_CDS_6|900_bp
atgcaaggggtgaaggagcgcttcctaccgttagggaactctggggacagagcgccccgg
ccgcctgatggccgaggcagggtgcgacccaggacccaggacggcgtcgggaaccatacc
atggcccggatccccaagaccctaaagttcgtcgtcgtcatcgtcgcggtcctgctgcca
gtcctagcttactctgccaccactgcccggcaggaggaagttccccagcagacagtggcc
ccacagcaacagaggcacagcttcaagggggaggagtgtccagcaggatctcatagatca
gaacatactggagcctgtaacccgtgcacagagggtgtggattacaccaacgcttccaac
aatgaaccttcttgcttcccatgtacagtttgtaaatcagatcaaaaacataaaagttcc
tgcaccatgaccagagacacagtgtgtcagtgtaaagaaggcaccttccggaatgaaaac
tccccagagatgtgccggaagtgtagcaggtgccctagtggggaagtccaagtcagtaat
tgtacgtcctgggatgatatccagtgtgttgaagaatttggtgccaatgccactgtggaa
accccagctgctgaagagacaatgaacaccagcccggggactcctgccccagctgctgaa
gagacaatgaacaccagcccggggactcctgccccagctgctgaagagacaatgaccacc
agcccggggactcctgccccagctgctgaagagacaatgaccaccagcccggggactcct
gccccagctgctgaagagacaatgatcaccagcccggggactcctgcctcttctcattac
ctctcatgcaccatcgtagggatcatagttctaattgtgcttctgattgtgtttgtttga