Result of FASTA (omim) for pF1KSDA0696
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0696, 542 aa
  1>>>pF1KSDA0696 542 - 542 aa - 542 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3133+/-0.000547; mu= 13.6991+/- 0.033
 mean_var=184.5930+/-41.392, 0's: 0 Z-trim(111.2): 330  B-trim: 81 in 1/53
 Lambda= 0.094399
 statistics sampled from 19354 (19739) to 19354 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.231), width:  16
 Scan time:  6.690

The best scores are:                                      opt bits E(85289)
NP_036432 (OMIM: 605651) F-box/WD repeat-containin ( 542) 3696 517.2 5.1e-146
XP_016864770 (OMIM: 605651) PREDICTED: F-box/WD re ( 510) 3478 487.5 4.3e-137
XP_016864769 (OMIM: 605651) PREDICTED: F-box/WD re ( 510) 3361 471.5 2.7e-132
XP_005265915 (OMIM: 605651) PREDICTED: F-box/WD re ( 510) 3361 471.5 2.7e-132
XP_005265914 (OMIM: 605651) PREDICTED: F-box/WD re ( 515) 3361 471.5 2.7e-132
NP_387448 (OMIM: 605651) F-box/WD repeat-containin ( 529) 3361 471.5 2.7e-132
XP_005265913 (OMIM: 605651) PREDICTED: F-box/WD re ( 531) 3361 471.5 2.8e-132
XP_016864768 (OMIM: 605651) PREDICTED: F-box/WD re ( 542) 3361 471.6 2.8e-132
XP_005265912 (OMIM: 605651) PREDICTED: F-box/WD re ( 563) 3361 471.6 2.9e-132
NP_387449 (OMIM: 605651) F-box/WD repeat-containin ( 508) 3359 471.3 3.2e-132
XP_016872363 (OMIM: 603482) PREDICTED: F-box/WD re ( 543) 3058 430.3 7.4e-120
NP_003930 (OMIM: 603482) F-box/WD repeat-containin ( 569) 3049 429.1 1.8e-119
XP_016872362 (OMIM: 603482) PREDICTED: F-box/WD re ( 587) 3049 429.1 1.8e-119
XP_016872361 (OMIM: 603482) PREDICTED: F-box/WD re ( 587) 3049 429.1 1.8e-119
XP_016872360 (OMIM: 603482) PREDICTED: F-box/WD re ( 587) 3049 429.1 1.8e-119
NP_378663 (OMIM: 603482) F-box/WD repeat-containin ( 605) 3049 429.1 1.8e-119
XP_006718117 (OMIM: 603482) PREDICTED: F-box/WD re ( 732) 3049 429.2 2.1e-119
NP_001243785 (OMIM: 603482) F-box/WD repeat-contai ( 579) 3045 428.6 2.6e-119
XP_016872359 (OMIM: 603482) PREDICTED: F-box/WD re ( 706) 3045 428.7 2.9e-119
XP_011538622 (OMIM: 603482) PREDICTED: F-box/WD re ( 537) 3026 425.9 1.5e-118
XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540)  411 69.8 2.4e-11
NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589)  411 69.9 2.6e-11
NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627)  411 69.9 2.7e-11
XP_011530389 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  411 69.9 2.8e-11
XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  411 69.9 2.8e-11
XP_011530387 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  411 70.0 2.8e-11
XP_011530386 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  411 70.0 2.8e-11
XP_016863851 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  411 70.0 2.8e-11
NP_361014 (OMIM: 606278) F-box/WD repeat-containin ( 707)  411 70.0 2.8e-11
XP_011530385 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  411 70.0 2.8e-11
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334)  370 63.9 8.7e-10
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334)  370 63.9 8.7e-10
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334)  370 63.9 8.7e-10
NP_004757 (OMIM: 606990) coatomer subunit beta' [H ( 906)  369 64.4 1.7e-09
NP_008882 (OMIM: 601787) transcription initiation  ( 800)  358 62.8 4.6e-09
XP_016863001 (OMIM: 606990) PREDICTED: coatomer su ( 877)  357 62.7 5.3e-09
XP_011521928 (OMIM: 611679) PREDICTED: F-box/WD re ( 745)  354 62.2 6.4e-09
XP_016879510 (OMIM: 611679) PREDICTED: F-box/WD re ( 724)  349 61.5   1e-08
XP_011521927 (OMIM: 611679) PREDICTED: F-box/WD re ( 856)  349 61.6 1.1e-08
XP_016879509 (OMIM: 611679) PREDICTED: F-box/WD re ( 856)  349 61.6 1.1e-08
NP_006373 (OMIM: 604596) CMT1A duplicated region t ( 752)  348 61.4 1.1e-08
NP_001254514 (OMIM: 611679) F-box/WD repeat-contai (1052)  349 61.7 1.3e-08
NP_001269469 (OMIM: 604596) CMT1A duplicated regio ( 714)  346 61.1 1.3e-08
XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374)  341 60.1 1.4e-08
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340)  330 58.5 3.9e-08
NP_001269468 (OMIM: 139380,613065,616973) guanine  ( 340)  330 58.5 3.9e-08
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340)  330 58.5 3.9e-08
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340)  330 58.5 3.9e-08
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340)  330 58.5 3.9e-08
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655)  332 59.2 4.7e-08


>>NP_036432 (OMIM: 605651) F-box/WD repeat-containing pr  (542 aa)
 initn: 3696 init1: 3696 opt: 3696  Z-score: 2742.4  bits: 517.2 E(85289): 5.1e-146
Smith-Waterman score: 3696; 100.0% identity (100.0% similar) in 542 aa overlap (1-542:1-542)

               10        20        30        40        50        60
pF1KSD MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD RKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD TALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 TALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD LSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD GHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 GHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD SDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD STLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 STLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYI
              490       500       510       520       530       540

         
pF1KSD SR
       ::
NP_036 SR
         

>>XP_016864770 (OMIM: 605651) PREDICTED: F-box/WD repeat  (510 aa)
 initn: 3478 init1: 3478 opt: 3478  Z-score: 2582.3  bits: 487.5 E(85289): 4.3e-137
Smith-Waterman score: 3478; 100.0% identity (100.0% similar) in 510 aa overlap (33-542:1-510)

             10        20        30        40        50        60  
pF1KSD PDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRK
                                     ::::::::::::::::::::::::::::::
XP_016                               MCALSCLQSMPSVRCLQISNGTSSVIVSRK
                                             10        20        30

             70        80        90       100       110       120  
pF1KSD RPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITA
               40        50        60        70        80        90

            130       140       150       160       170       180  
pF1KSD LPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLS
              100       110       120       130       140       150

            190       200       210       220       230       240  
pF1KSD ERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKG
              160       170       180       190       200       210

            250       260       270       280       290       300  
pF1KSD VYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTV
              220       230       240       250       260       270

            310       320       330       340       350       360  
pF1KSD RVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH
              280       290       300       310       320       330

            370       380       390       400       410       420  
pF1KSD RAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSD
              340       350       360       370       380       390

            430       440       450       460       470       480  
pF1KSD NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAST
              400       410       420       430       440       450

            490       500       510       520       530       540  
pF1KSD LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
              460       470       480       490       500       510

>>XP_016864769 (OMIM: 605651) PREDICTED: F-box/WD repeat  (510 aa)
 initn: 3361 init1: 3361 opt: 3361  Z-score: 2496.1  bits: 471.5 E(85289): 2.7e-132
Smith-Waterman score: 3361; 100.0% identity (100.0% similar) in 494 aa overlap (49-542:17-510)

       20        30        40        50        60        70        
pF1KSD PRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                                     ::::::::::::::::::::::::::::::
XP_016               MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                             10        20        30        40      

       80        90       100       110       120       130        
pF1KSD YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
         50        60        70        80        90       100      

      140       150       160       170       180       190        
pF1KSD LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
        110       120       130       140       150       160      

      200       210       220       230       240       250        
pF1KSD GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
        170       180       190       200       210       220      

      260       270       280       290       300       310        
pF1KSD DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
        230       240       250       260       270       280      

      320       330       340       350       360       370        
pF1KSD HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
        290       300       310       320       330       340      

      380       390       400       410       420       430        
pF1KSD ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
        350       360       370       380       390       400      

      440       450       460       470       480       490        
pF1KSD LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
        410       420       430       440       450       460      

      500       510       520       530       540  
pF1KSD QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
       ::::::::::::::::::::::::::::::::::::::::::::
XP_016 QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
        470       480       490       500       510

>>XP_005265915 (OMIM: 605651) PREDICTED: F-box/WD repeat  (510 aa)
 initn: 3361 init1: 3361 opt: 3361  Z-score: 2496.1  bits: 471.5 E(85289): 2.7e-132
Smith-Waterman score: 3361; 100.0% identity (100.0% similar) in 494 aa overlap (49-542:17-510)

       20        30        40        50        60        70        
pF1KSD PRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                                     ::::::::::::::::::::::::::::::
XP_005               MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                             10        20        30        40      

       80        90       100       110       120       130        
pF1KSD YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
         50        60        70        80        90       100      

      140       150       160       170       180       190        
pF1KSD LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
        110       120       130       140       150       160      

      200       210       220       230       240       250        
pF1KSD GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
        170       180       190       200       210       220      

      260       270       280       290       300       310        
pF1KSD DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
        230       240       250       260       270       280      

      320       330       340       350       360       370        
pF1KSD HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
        290       300       310       320       330       340      

      380       390       400       410       420       430        
pF1KSD ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
        350       360       370       380       390       400      

      440       450       460       470       480       490        
pF1KSD LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
        410       420       430       440       450       460      

      500       510       520       530       540  
pF1KSD QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
       ::::::::::::::::::::::::::::::::::::::::::::
XP_005 QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
        470       480       490       500       510

>>XP_005265914 (OMIM: 605651) PREDICTED: F-box/WD repeat  (515 aa)
 initn: 3361 init1: 3361 opt: 3361  Z-score: 2496.1  bits: 471.5 E(85289): 2.7e-132
Smith-Waterman score: 3361; 100.0% identity (100.0% similar) in 494 aa overlap (49-542:22-515)

       20        30        40        50        60        70        
pF1KSD PRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                                     ::::::::::::::::::::::::::::::
XP_005          MNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                        10        20        30        40        50 

       80        90       100       110       120       130        
pF1KSD YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
              60        70        80        90       100       110 

      140       150       160       170       180       190        
pF1KSD LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
             120       130       140       150       160       170 

      200       210       220       230       240       250        
pF1KSD GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
             180       190       200       210       220       230 

      260       270       280       290       300       310        
pF1KSD DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
             240       250       260       270       280       290 

      320       330       340       350       360       370        
pF1KSD HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
             300       310       320       330       340       350 

      380       390       400       410       420       430        
pF1KSD ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
             360       370       380       390       400       410 

      440       450       460       470       480       490        
pF1KSD LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
             420       430       440       450       460       470 

      500       510       520       530       540  
pF1KSD QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
       ::::::::::::::::::::::::::::::::::::::::::::
XP_005 QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
             480       490       500       510     

>>NP_387448 (OMIM: 605651) F-box/WD repeat-containing pr  (529 aa)
 initn: 3441 init1: 3361 opt: 3361  Z-score: 2496.0  bits: 471.5 E(85289): 2.7e-132
Smith-Waterman score: 3408; 94.3% identity (95.8% similar) in 543 aa overlap (1-542:1-529)

               10        20        30        40         50         
pF1KSD MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCL-QISNGTSSVIV
       ::::::::::::::: .          ...:..      .  :.   : :::::::::::
NP_387 MEPDSVIEDKTIELMNT----------SVMEDQNE----DESPKKNTLWQISNGTSSVIV
               10                  20            30        40      

      60        70        80        90       100       110         
pF1KSD SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF
         50        60        70        80        90       100      

     120       130       140       150       160       170         
pF1KSD ITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 ITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWK
        110       120       130       140       150       160      

     180       190       200       210       220       230         
pF1KSD GLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 GLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSEN
        170       180       190       200       210       220      

     240       250       260       270       280       290         
pF1KSD SKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 SKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSD
        230       240       250       260       270       280      

     300       310       320       330       340       350         
pF1KSD STVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 STVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL
        290       300       310       320       330       340      

     360       370       380       390       400       410         
pF1KSD VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSG
        350       360       370       380       390       400      

     420       430       440       450       460       470         
pF1KSD SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAP
        410       420       430       440       450       460      

     480       490       500       510       520       530         
pF1KSD ASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 ASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTY
        470       480       490       500       510       520      

     540  
pF1KSD ISR
       :::
NP_387 ISR
          

>>XP_005265913 (OMIM: 605651) PREDICTED: F-box/WD repeat  (531 aa)
 initn: 3361 init1: 3361 opt: 3361  Z-score: 2495.9  bits: 471.5 E(85289): 2.8e-132
Smith-Waterman score: 3426; 96.0% identity (96.0% similar) in 531 aa overlap (33-542:1-531)

             10        20        30        40                      
pF1KSD PDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQ-------------
                                     :::::::::::::::::             
XP_005                               MCALSCLQSMPSVRCLQNTSVMEDQNEDES
                                             10        20        30

              50        60        70        80        90       100 
pF1KSD --------ISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCH
               ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCH
               40        50        60        70        80        90

             110       120       130       140       150       160 
pF1KSD YQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEG
              100       110       120       130       140       150

             170       180       190       200       210       220 
pF1KSD MLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIES
              160       170       180       190       200       210

             230       240       250       260       270       280 
pF1KSD NWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG
              220       230       240       250       260       270

             290       300       310       320       330       340 
pF1KSD SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRS
              280       290       300       310       320       330

             350       360       370       380       390       400 
pF1KSD IAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG
              340       350       360       370       380       390

             410       420       430       440       450       460 
pF1KSD HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY
              400       410       420       430       440       450

             470       480       490       500       510       520 
pF1KSD DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN
              460       470       480       490       500       510

             530       540  
pF1KSD VPPSAQNETRSPSRTYTYISR
       :::::::::::::::::::::
XP_005 VPPSAQNETRSPSRTYTYISR
              520       530 

>>XP_016864768 (OMIM: 605651) PREDICTED: F-box/WD repeat  (542 aa)
 initn: 3361 init1: 3361 opt: 3361  Z-score: 2495.9  bits: 471.6 E(85289): 2.8e-132
Smith-Waterman score: 3361; 100.0% identity (100.0% similar) in 494 aa overlap (49-542:49-542)

       20        30        40        50        60        70        
pF1KSD PRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
                                     ::::::::::::::::::::::::::::::
XP_016 ISWISKFDQENTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIK
       20        30        40        50        60        70        

       80        90       100       110       120       130        
pF1KSD YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSY
       80        90       100       110       120       130        

      140       150       160       170       180       190        
pF1KSD LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTD
      140       150       160       170       180       190        

      200       210       220       230       240       250        
pF1KSD GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLR
      200       210       220       230       240       250        

      260       270       280       290       300       310        
pF1KSD DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH
      260       270       280       290       300       310        

      320       330       340       350       360       370        
pF1KSD HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVS
      320       330       340       350       360       370        

      380       390       400       410       420       430        
pF1KSD ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
      380       390       400       410       420       430        

      440       450       460       470       480       490        
pF1KSD LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
      440       450       460       470       480       490        

      500       510       520       530       540  
pF1KSD QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
       ::::::::::::::::::::::::::::::::::::::::::::
XP_016 QFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
      500       510       520       530       540  

>>XP_005265912 (OMIM: 605651) PREDICTED: F-box/WD repeat  (563 aa)
 initn: 3361 init1: 3361 opt: 3361  Z-score: 2495.7  bits: 471.6 E(85289): 2.9e-132
Smith-Waterman score: 3644; 96.3% identity (96.3% similar) in 563 aa overlap (1-542:1-563)

               10        20        30        40                    
pF1KSD MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQ-----------
       :::::::::::::::::::::::::::::::::::::::::::::::::           
XP_005 MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNED
               10        20        30        40        50        60

                50        60        70        80        90         
pF1KSD ----------ISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRM
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRM
               70        80        90       100       110       120

     100       110       120       130       140       150         
pF1KSD CHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVIS
              130       140       150       160       170       180

     160       170       180       190       200       210         
pF1KSD EGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETI
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KSD ESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGH
              250       260       270       280       290       300

     280       290       300       310       320       330         
pF1KSD TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKD
              310       320       330       340       350       360

     340       350       360       370       380       390         
pF1KSD RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL
              370       380       390       400       410       420

     400       410       420       430       440       450         
pF1KSD NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG
              430       440       450       460       470       480

     460       470       480       490       500       510         
pF1KSD AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDF
              490       500       510       520       530       540

     520       530       540  
pF1KSD LNVPPSAQNETRSPSRTYTYISR
       :::::::::::::::::::::::
XP_005 LNVPPSAQNETRSPSRTYTYISR
              550       560   

>>NP_387449 (OMIM: 605651) F-box/WD repeat-containing pr  (508 aa)
 initn: 3359 init1: 3359 opt: 3359  Z-score: 2494.7  bits: 471.3 E(85289): 3.2e-132
Smith-Waterman score: 3370; 93.7% identity (93.7% similar) in 542 aa overlap (1-542:1-508)

               10        20        30        40        50        60
pF1KSD MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVS
       :::::::::::::::                                  :::::::::::
NP_387 MEPDSVIEDKTIELM----------------------------------ISNGTSSVIVS
               10                                          20      

               70        80        90       100       110       120
pF1KSD RKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 RKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFI
         30        40        50        60        70        80      

              130       140       150       160       170       180
pF1KSD TALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 TALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKG
         90       100       110       120       130       140      

              190       200       210       220       230       240
pF1KSD LSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 LSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENS
        150       160       170       180       190       200      

              250       260       270       280       290       300
pF1KSD KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 KGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDS
        210       220       230       240       250       260      

              310       320       330       340       350       360
pF1KSD TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 TVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLV
        270       280       290       300       310       320      

              370       380       390       400       410       420
pF1KSD GHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 GHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS
        330       340       350       360       370       380      

              430       440       450       460       470       480
pF1KSD SDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA
        390       400       410       420       430       440      

              490       500       510       520       530       540
pF1KSD STLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_387 STLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYI
        450       460       470       480       490       500      

         
pF1KSD SR
       ::
NP_387 SR
         




542 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 02:44:14 2016 done: Thu Nov  3 02:44:15 2016
 Total Scan time:  6.690 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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