Result of FASTA (omim) for pF1KSDA0398
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0398, 476 aa
  1>>>pF1KSDA0398 476 - 476 aa - 476 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0517+/-0.000433; mu= 9.6495+/- 0.027
 mean_var=109.0700+/-20.626, 0's: 0 Z-trim(113.0): 17  B-trim: 0 in 0/53
 Lambda= 0.122807
 statistics sampled from 22116 (22129) to 22116 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.259), width:  16
 Scan time:  7.150

The best scores are:                                      opt bits E(85289)
NP_003790 (OMIM: 603514) mRNA cap guanine-N7 methy ( 476) 3138 567.1 3.7e-161
XP_005258219 (OMIM: 603514) PREDICTED: mRNA cap gu ( 476) 3138 567.1 3.7e-161
XP_011524053 (OMIM: 603514) PREDICTED: mRNA cap gu ( 512) 3068 554.7 2.1e-157
XP_011524052 (OMIM: 603514) PREDICTED: mRNA cap gu ( 512) 3068 554.7 2.1e-157
XP_011524051 (OMIM: 603514) PREDICTED: mRNA cap gu ( 512) 3068 554.7 2.1e-157
NP_001295192 (OMIM: 603514) mRNA cap guanine-N7 me ( 504) 3065 554.2  3e-157
XP_016881550 (OMIM: 603514) PREDICTED: mRNA cap gu ( 504) 3065 554.2  3e-157
XP_011524055 (OMIM: 603514) PREDICTED: mRNA cap gu ( 334) 1922 351.6 1.9e-96


>>NP_003790 (OMIM: 603514) mRNA cap guanine-N7 methyltra  (476 aa)
 initn: 3138 init1: 3138 opt: 3138  Z-score: 3014.3  bits: 567.1 E(85289): 3.7e-161
Smith-Waterman score: 3138; 100.0% identity (100.0% similar) in 476 aa overlap (1-476:1-476)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470      
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ
              430       440       450       460       470      

>>XP_005258219 (OMIM: 603514) PREDICTED: mRNA cap guanin  (476 aa)
 initn: 3138 init1: 3138 opt: 3138  Z-score: 3014.3  bits: 567.1 E(85289): 3.7e-161
Smith-Waterman score: 3138; 100.0% identity (100.0% similar) in 476 aa overlap (1-476:1-476)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470      
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ
              430       440       450       460       470      

>>XP_011524053 (OMIM: 603514) PREDICTED: mRNA cap guanin  (512 aa)
 initn: 3154 init1: 3068 opt: 3068  Z-score: 2946.8  bits: 554.7 E(85289): 2.1e-157
Smith-Waterman score: 3068; 99.4% identity (99.6% similar) in 468 aa overlap (1-468:1-468)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470          
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ    
       ::::::::::::::::::::::::::::::::::::::::::::  .:            
XP_011 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATRSFLHGGNTLDGWWLP
              430       440       450       460       470       480

XP_011 KIGVAVAVKTMKFASLIDHSFTEDFSVACSAV
              490       500       510  

>>XP_011524052 (OMIM: 603514) PREDICTED: mRNA cap guanin  (512 aa)
 initn: 3154 init1: 3068 opt: 3068  Z-score: 2946.8  bits: 554.7 E(85289): 2.1e-157
Smith-Waterman score: 3068; 99.4% identity (99.6% similar) in 468 aa overlap (1-468:1-468)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470          
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ    
       ::::::::::::::::::::::::::::::::::::::::::::  .:            
XP_011 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATRSFLHGGNTLDGWWLP
              430       440       450       460       470       480

XP_011 KIGVAVAVKTMKFASLIDHSFTEDFSVACSAV
              490       500       510  

>>XP_011524051 (OMIM: 603514) PREDICTED: mRNA cap guanin  (512 aa)
 initn: 3154 init1: 3068 opt: 3068  Z-score: 2946.8  bits: 554.7 E(85289): 2.1e-157
Smith-Waterman score: 3068; 99.4% identity (99.6% similar) in 468 aa overlap (1-468:1-468)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470          
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ    
       ::::::::::::::::::::::::::::::::::::::::::::  .:            
XP_011 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATRSFLHGGNTLDGWWLP
              430       440       450       460       470       480

XP_011 KIGVAVAVKTMKFASLIDHSFTEDFSVACSAV
              490       500       510  

>>NP_001295192 (OMIM: 603514) mRNA cap guanine-N7 methyl  (504 aa)
 initn: 3150 init1: 3064 opt: 3065  Z-score: 2944.1  bits: 554.2 E(85289): 3e-157
Smith-Waterman score: 3065; 98.3% identity (99.2% similar) in 473 aa overlap (1-473:1-473)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470          
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ    
       :::::::::::::::::::::::::::::::::::::::::::: . ...  :       
NP_001 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATRLTVTIMREAWLSTVG
              430       440       450       460       470       480

NP_001 PGRAPVAASSVKWGTPRPAMQFIL
              490       500    

>>XP_016881550 (OMIM: 603514) PREDICTED: mRNA cap guanin  (504 aa)
 initn: 3150 init1: 3064 opt: 3065  Z-score: 2944.1  bits: 554.2 E(85289): 3e-157
Smith-Waterman score: 3065; 98.3% identity (99.2% similar) in 473 aa overlap (1-473:1-473)

               10        20        30        40        50        60
pF1KSD MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MANSAKAEEYEKMSLEQAKASVNSETESSFNINENTTASGTGLSEKTSVCRQVDIARKRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFEDDLVKESSSCGKDTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEP
              370       380       390       400       410       420

              430       440       450       460       470          
pF1KSD YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ    
       :::::::::::::::::::::::::::::::::::::::::::: . ...  :       
XP_016 YPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATRLTVTIMREAWLSTVG
              430       440       450       460       470       480

XP_016 PGRAPVAASSVKWGTPRPAMQFIL
              490       500    

>>XP_011524055 (OMIM: 603514) PREDICTED: mRNA cap guanin  (334 aa)
 initn: 1946 init1: 1922 opt: 1922  Z-score: 1852.4  bits: 351.6 E(85289): 1.9e-96
Smith-Waterman score: 1922; 99.0% identity (99.3% similar) in 290 aa overlap (179-468:1-290)

      150       160       170       180       190       200        
pF1KSD VAAHYNELQEVGLEKRSQSRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGK
                                     ::::::::::::::::::::::::::::::
XP_011                               MKSVLIGEFLEKVRQKKKRDITVLDLGCGK
                                             10        20        30

      210       220       230       240       250       260        
pF1KSD GGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI
               40        50        60        70        80        90

      270       280       290       300       310       320        
pF1KSD DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRL
              100       110       120       130       140       150

      330       340       350       360       370       380        
pF1KSD EASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMK
              160       170       180       190       200       210

      390       400       410       420       430       440        
pF1KSD LVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPANESSKLVSEKVDDYEHAAKYMKNSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPANESSKLVSEKVDDYEHAAKYMKNSQ
              220       230       240       250       260       270

      450       460       470                                      
pF1KSD VRLPLGTLSKSEWEATSIYLVFAFEKQQ                                
       ::::::::::::::::  .:                                        
XP_011 VRLPLGTLSKSEWEATRSFLHGGNTLDGWWLPKIGVAVAVKTMKFASLIDHSFTEDFSVA
              280       290       300       310       320       330




476 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 01:36:57 2016 done: Thu Nov  3 01:36:58 2016
 Total Scan time:  7.150 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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