GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:24:18

Sequence gi568815578f:32209778_32431316 : 221539 bp : 44.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    294    415  122  1  2   98   92    95 0.518  11.11
 1.02 Intr +   5492   5674  183  1  0  102   98   229 0.981  25.28
 1.03 Intr +   6832   6944  113  0  2  118   65    -6 0.075  -0.72
 1.04 Intr +  18486  18678  193  0  1  108   28   150 0.870  10.49
 1.05 Intr +  21042  21284  243  2  0   95   95   289 0.960  27.99
 1.06 Term +  24696  24884  189  2  0  130   37   242 0.999  20.75
 1.07 PlyA +  27539  27544    6                               1.05

 2.00 Prom +  28827  28866   40                              -5.26
 2.01 Init +  38340  38441  102  2  0   21   70   151 0.086   4.88
 2.02 Intr +  46708  46729   22  0  1  119   67     4 0.010  -1.48
 2.03 Intr +  55741  55805   65  2  2  109   67    44 0.127   2.84
 2.04 Intr +  62618  62706   89  1  2   52  100    51 0.159   1.47
 2.05 Intr +  67898  67988   91  2  1   41  109    94 0.435   6.80
 2.06 Term +  71219  71242   24  1  0  111   43    -5 0.084  -4.48
 2.07 PlyA +  73258  73263    6                               1.05

 3.00 Prom +  81115  81154   40                              -3.36
 3.01 Sngl + 100001 101482 1482  1  0   53   41  1667 0.910 154.01
 3.02 PlyA + 101759 101764    6                              -0.45

 4.00 Prom + 101956 101995   40                              -8.06
 4.01 Init + 102213 102261   49  2  1   86   89    63 0.942   5.31
 4.02 Intr + 106370 106542  173  0  2   99   93   112 0.951  12.46
 4.03 Intr + 106750 106872  123  0  0   52   86   144 0.997  11.38
 4.04 Intr + 106979 107097  119  1  2  125  108   153 0.950  20.26
 4.05 Intr + 116994 117107  114  0  0  104   83    12 0.719   1.86
 4.06 Intr + 117779 117884  106  2  1   35   76   110 0.468   4.72
 4.07 Intr + 120364 120542  179  0  2   68  109   206 0.920  19.42
 4.08 Intr + 148258 148348   91  1  1   60   63    31 0.166  -2.20
 4.09 Intr + 148927 149055  129  0  0   68   81   111 0.342   9.29
 4.10 Intr + 156607 156689   83  0  2   71   68    84 0.138   3.14
 4.11 Intr + 159238 159346  109  1  1   86  115   -40 0.078  -1.21
 4.12 Intr + 218351 218471  121  1  1   78   91    70 0.489   6.37
 4.13 Intr + 218548 218645   98  2  2  109  110    -8 0.954   3.23
 4.14 Intr + 219561 219654   94  2  1   76   91    46 0.951   3.24
 4.15 Intr + 220124 220276  153  0  0   75  109   243 0.999  25.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  13359  13453   95  2  2   81   84    32 0.810   1.96
S.002 Term - 166418 166318  101  0  2   77   42    79 0.895   0.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:32209778_32431316|GENSCAN_predicted_peptide_1|347_aa
XRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHR
VISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNK
SELFTGISFSASYREQWSQRFSPKEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMVKT
GEAQIHAHLVRPYVGIHLRIGSDWKNACAMLKDGTAGSHFMASPQCVGYSRSTAAPLTMT
MCLPDLKEIQRAVKLWVRSLDAQSVYVATDSESYVPELQQLFKGKVKVVSLKPEVAQVDL
YILGQADHFIGNCVSSFTAFVKRERDLQGRPSSFFGMDRPPKLRDEF

>gi568815578f:32209778_32431316|GENSCAN_predicted_CDS_1|1044_bp
nggcgctttgggaaccaggccgatcacttcttgggctctctggcatttgcaaagctgcta
aaccgtaccttggctgtccctccttggattgagtaccagcatcacaagcctcctttcacc
aacctccatgtgtcctaccagaagtacttcaagctggagcccctccaggcttaccatcgg
gtcatcagcttggaggatttcatggagaagctggcacccacccactggccccctgagaag
cgggtggcatactgctttgaggtggcagcccagcgaagcccagataagaagacgtgcccc
atgaaggaaggaaacccctttggcccattctgggatcagtttcatgtgagtttcaacaag
tcggagctttttacaggcatttccttcagtgcttcctacagagaacaatggagccagaga
ttttctccaaaggaacatccggtgcttgccctgccaggagccccagcccagttccccgtc
ctagaggaacacaggccactacagaagtacatggtatggtcagacgaaatggtgaagacg
ggagaggcccagattcatgcccaccttgtccggccctatgtgggcattcatctgcgcatt
ggctctgactggaagaacgcctgtgccatgctgaaggacgggactgcaggctcgcacttc
atggcctctccgcagtgtgtgggctacagccgcagcacagcggcccccctcacgatgact
atgtgcctgcctgacctgaaggagatccagagggctgtgaagctctgggtgaggtcgctg
gatgcccagtcggtctacgttgctactgattccgagagttatgtgcctgagctccaacag
ctcttcaaagggaaggtgaaggtggtgagcctgaagcctgaggtggcccaggtcgacctg
tacatcctcggccaagccgaccactttattggcaactgtgtctcctccttcactgccttt
gtgaagcgggagcgggacctccaggggaggccgtcttctttcttcggcatggacaggccc
cctaagctgcgggacgagttctga

>gi568815578f:32209778_32431316|GENSCAN_predicted_peptide_2|130_aa
MAGKLGLTIGRRPLFLSMGLLEGLCNIVAVYPQRYLEPNPLAPSNYHSIFYLHEFDYSKY
FIQVGDGHVIKDQPIKAWVIEVETVGNPYGEGSGEWLSQGFAAPAAAAAAAAAAAARFRL
GPQTSVRCLD

>gi568815578f:32209778_32431316|GENSCAN_predicted_CDS_2|393_bp
atggctggcaagttggggctgactattggccggaggcctctgttcctctccatggggttg
ctggaaggtctttgcaacatcgtggctgtctacccccagagatacctggagccaaaccct
ttagcacctagcaactaccactctattttctatctccacgaatttgactactctaagtac
ttcatacaggtaggagatgggcatgtgatcaaggatcaaccaattaaggcttgggttata
gaggtcgagactgtggggaatccttatggagagggaagcggggaatggctgagccagggg
ttcgccgcccccgccgccgccgccgccgccgccgccgccgccgccgcccgctttcggctc
gggcctcagacttctgttaggtgcctggattag

>gi568815578f:32209778_32431316|GENSCAN_predicted_peptide_3|493_aa
MSKLKSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFD
AVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIP
NSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLS
SFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGK
LNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRL
LQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQE
EIARLKAQLEKRSIGRRKRREKRREGGGSGGGGEEEEEEGEEGEEEGDDKDDYWREQQEK
LEIEKRAIVEDHSLVAEEKMRLLKEKEKKMEDLRREKDAAEMLGAKIKVPYPYPSLGPCP
VTAFAFIKQQQKT

>gi568815578f:32209778_32431316|GENSCAN_predicted_CDS_3|1482_bp
atgtcaaagttgaaaagctcagagtcagtcagggtggtggttcgctgtcggcccatgaat
ggcaaggaaaaggctgcttcgtatgacaaagtggtggatgtggatgttaagctggggcag
gtgtctgtgaagaaccccaaagggacggcccatgaaatgcccaagaccttcacctttgat
gccgtctatgactggaatgccaagcagtttgaactgtacgatgagacgttccgaccactt
gttgactctgtcctgcaaggtttcaatggaaccatttttgcctatggacaaactgggaca
ggaaaaacctacaccatggaaggaatccgtggtgaccctgaaaaaagaggagtcattcct
aactcatttgaccatatcttcacccacatctctcgatcccagaatcaacaatacctggtc
agggcttcttacttagagatctaccaggaggagatccgagatttgctctcaaaggatcag
accaaaaggcttgagctcaaagagaggcctgacacaggagtgtatgtgaaagacctgtct
tcctttgtcaccaagagtgtgaaggagatagagcatgtgatgaatgtggggaaccagaac
cgttctgtcggtgctaccaacatgaacgagcacagctcgcgttctcatgcaattttcgtt
atcactattgagtgcagcgaggtgggcctcgatggtgaaaaccacatccgtgtaggaaaa
ttgaaccttgtagatcttgctggcagcgaacggcaagccaagaccggcgcacaaggggag
agattaaaagaagctaccaagatcaacctctccctttccgctttgggtaatgtcatctct
gctctagtggacggcaaaagcactcacattccatatcgggactcaaagcttaccaggctc
ctccaagattcccttggtggcaatgccaagactgtgatggtggccaacgtggggcctgcc
tcttacaacgtagaagagactctgaccactctgcgatatgccaaccgtgccaaaaacatt
aagaacaaaccaagggtcaatgaggaccccaaggatgccctccttcgagaattccaggaa
gagattgctcggctcaaggcccagctggaaaaacggtccattggtaggaggaagaggcga
gagaagcggagggaaggtggtggcagtggtgggggtggggaagaggaggaggaggaggga
gaagagggtgaggaggaaggggatgataaggatgattactggcgggaacagcaagaaaaa
ctggagattgagaagcgggccattgtagaggatcacagcttggttgcagaggagaagatg
aggctgctgaaggagaaagagaaaaagatggaggacctgcggcgggagaaggatgctgcc
gagatgctgggcgccaagatcaaggtaccatacccgtacccttccttaggcccttgccct
gtcactgcttttgctttcatcaaacaacaacaaaaaacataa

>gi568815578f:32209778_32431316|GENSCAN_predicted_peptide_4|581_aa
MGFHYVGLAGLELLTSGSPVRNYVLRETVHEMDSTLFLTQAMESKLLVGGKNIVDHTNEQ
QKILEQKRQEIAEQKRREREIQQQMESRDEETLELKETYSSLQQEVDIKTKKLKKLFSKL
QAVKAEIHDLQEEHIKERQELEQTQNELTRELKLKHLIIENFIPLEEKSKIMNRAFFDEE
EDHWKLHPITRLENQQMMKRPVSAVGYKRPLSQHARMSMMIRPEARYRAENIVLLELDMP
SRTTRDYEGPAIAPKVQAALDAALQDEDEIQVDASSFESTANKKSKARIPQAPSQFSHLA
RLHPAPSPNSDPSPFLAEPRATAPARPARRSRVELPPPPGRRMKDKQKKKKERTWAEAAR
LVLENYSDAPMTPKQILQVIEAEGLKEMSGTSPLACLNAMLHSNSRGGEGLFYKLPGRIS
LFTLKKDALQWSRHPATVEGEEPEDTADVESCGSNEASTVSGENDVSLDETSSNASCSTE
SQSRPLSNPRDSYRASSQANKQKKKTGVMLPRVVLTPLKVNGAHVESASGFSGCHADGES
GSPSSSSSGSLALGSAAIRGQAEVTQDPAPLLRGFRKPATX

>gi568815578f:32209778_32431316|GENSCAN_predicted_CDS_4|1743_bp
atggggtttcactatgttggcctggctggtctcgaactcctgacctcaggctcccctgtg
aggaattatgttctgagagaaaccgttcatgagatggattctactttgtttctcactcag
gccatggagagtaagttgcttgttggaggaaaaaatatagtagatcatacgaatgaacag
cagaaaatcctggagcagaaacgacaggaaattgcagagcagaaacgtcgagaaagagaa
atccagcaacagatggaaagtcgagatgaggagaccttggaacttaaagagacatacagc
tcattgcagcaagaggtggacatcaagaccaaaaaactcaaaaagctcttctccaagctt
caggcagtgaaggctgagatccatgacctccaagaagaacacatcaaggagcgccaagag
ctagagcagactcagaatgagctcaccagggagctgaaactcaagcatcttattatagaa
aactttatccctctggaagaaaaaagtaaaattatgaatagagccttctttgatgaagag
gaagatcattggaaactacatcctataaccagactggagaaccagcagatgatgaagcgg
ccagtctcagccgtgggatataagagaccattgagccagcacgcaagaatgtccatgatg
attcgtccagaggcccgatatagggcagaaaacattgtgctgttagagctggacatgccc
agccggaccaccagagactatgagggtccagccattgcccccaaggtccaggctgcattg
gatgcggctctgcaggatgaagatgagatacaggtggatgcatcatcatttgaaagcact
gcaaataagaaatccaaggccagaatcccgcaggcccccagccagttctcgcacctcgcg
agactccacccagccccttccccgaacagcgacccgtccccgttcctagctgagccccgc
gccaccgccccagcccgcccagcccggaggtcccgcgtggagctgccgccgccgccgggg
agaaggatgaaggacaaacagaagaagaagaaggagcgcacgtgggccgaggccgcgcgc
ctggtattagaaaactactcggatgctccaatgacaccaaaacagattctgcaggtcata
gaggcagaaggactaaaggaaatgagtgggacttcccctctcgcatgcctcaatgctatg
ctacattccaattcaagaggaggagaggggttgttttataaactgcctggccgaatcagc
cttttcacgctcaagaaggatgccctgcagtggtctcgccatccagctacagtggaggga
gaggagccagaggacacggctgatgtggagagctgtgggtctaatgaagccagcactgtg
agtggtgaaaacgatgtatctcttgatgaaacatcttcgaacgcatcctgttctacagaa
tctcagagtcgacctctttccaatcccagggacagctacagagcttcctcacaggcgaac
aaacaaaagaaaaagactggggtgatgctgcctcgagttgtcctgactcctctgaaggta
aacggggcccacgtggaatctgcatcagggttctcgggctgccacgccgatggcgagagc
ggcagcccgtccagcagcagcagcggctctctggccctgggcagcgctgctattcgtggc
caggccgaggtcacccaggaccctgccccgctcctgagaggcttccggaagccagccaca
gnn