GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:04:50

Sequence gi568815591r:22022409_22293661 : 271253 bp : 40.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2439   2434    6                               1.05
 1.03 Term -   7394   7207  188  0  2   90   34   209 0.907  12.37
 1.02 Intr -   9261   9058  204  1  0  -24   47   189 0.152   1.85
 1.01 Init -  10073   9896  178  2  1  100    7   139 0.141   5.99
 1.00 Prom -  18516  18477   40                              -6.15

 2.00 Prom +  26318  26357   40                              -3.25
 2.01 Init +  27809  27977  169  1  1   35   49   175 0.741   8.04
 2.02 Intr +  41186  41229   44  0  2  104   93    53 0.156   4.44
 2.03 Intr +  41848  42077  230  0  2   59   92    77 0.590   0.94
 2.04 Intr +  58542  58707  166  0  1   52   -9   191 0.333   4.84
 2.05 Term +  60317  60817  501  1  0   15   49   213 0.166   3.59
 2.06 PlyA +  61712  61717    6                               1.05

 3.04 PlyA -  62638  62633    6                              -1.75
 3.03 Term -  63828  63297  532  2  1   52   53   191 0.781   4.73
 3.02 Intr -  64175  63938  238  0  1   -3   92   183 0.539   5.35
 3.01 Init -  69236  69083  154  2  1   60  117   108 0.768  11.10
 3.00 Prom -  70325  70286   40                              -6.25

 4.05 PlyA -  72921  72916    6                               1.05
 4.04 Term -  74928  74702  227  1  2   47   41   140 0.532   1.16
 4.03 Intr -  77034  76889  146  2  2   83   46   154 0.806   9.71
 4.02 Intr -  77817  77768   50  0  2   84   76    46 0.143  -0.44
 4.01 Init -  79713  79492  222  0  0   81   97   152 0.227  14.00
 4.00 Prom -  82417  82378   40                              -7.25

 5.03 PlyA -  82937  82932    6                               1.05
 5.02 Term -  83858  83409  450  2  0  -12   39   347 0.993  14.00
 5.01 Init -  84364  84203  162  1  0   56   40   154 0.443   7.18
 5.00 Prom -  84611  84572   40                              -5.35

 6.20 PlyA -  85044  85039    6                               1.05
 6.19 Term -  86773  86503  271  0  1   28   54   191 0.126   3.67
 6.18 Intr -  88821  88532  290  0  2   43   26   202 0.315   4.62
 6.17 Intr -  98312  98083  230  0  2   42   42   199 0.223   7.37
 6.16 Intr -  99965  99773  193  2  1  100  -22   119 0.256   0.24
 6.15 Intr - 100113 100004  110  1  2   76   45   114 0.876   4.98
 6.14 Intr - 103250 103196   55  2  1   96   97    47 0.820   4.03
 6.13 Intr - 114575 114525   51  2  0  108   98    28 0.690   3.99
 6.12 Intr - 117707 117617   91  1  1   90   83    74 0.788   6.18
 6.11 Intr - 122814 122636  179  0  2   55   89   123 0.903   6.90
 6.10 Intr - 124611 124489  123  0  0   57   84    42 0.539   0.56
 6.09 Intr - 128096 127999   98  0  2   41   87   156 0.998   9.61
 6.08 Intr - 132172 132047  126  2  0   54   98   209 0.699  18.23
 6.07 Intr - 134480 134402   79  2  1   89   87    31 0.973   1.31
 6.06 Intr - 135477 135447   31  2  1  111  121     1 0.986   2.91
 6.05 Intr - 138207 138110   98  0  2  115   89    69 0.966   7.59
 6.04 Intr - 140120 139989  132  2  0   32   84   103 0.804   4.22
 6.03 Intr - 159848 159809   40  1  1  104   50    52 0.066   0.31
 6.02 Intr - 167255 167126  130  0  1   68  116    56 0.628   5.23
 6.01 Init - 171253 170959  295  1  1   75  110   525 0.927  50.79
 6.00 Prom - 172340 172301   40                              -6.35

 7.09 PlyA - 173940 173935    6                               1.05
 7.08 Term - 176760 176650  111  0  0   94   47    47 0.206  -1.22
 7.07 Intr - 178962 178845  118  2  1   68   40    96 0.277   2.35
 7.06 Intr - 180929 180879   51  1  0   89  105    29 0.221   1.80
 7.05 Intr - 181252 181152  101  1  2   76   60    58 0.212  -0.21
 7.04 Intr - 197583 197458  126  0  0   43   87   162 0.076  11.56
 7.03 Intr - 208511 208438   74  0  2   53   80   146 0.923   8.51
 7.02 Intr - 244604 244556   49  2  1   82  119    39 0.424   3.73
 7.01 Intr - 268833 268767   67  2  1  117   95    90 0.895  10.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_1|189_aa
MPEPPRCSVGSCAARASPTSAAPCSKAPSPINHPRAEECGHMARDWQAAPPAAPVRDPLA
SLLSQRDHEPHQKEETPNTSEHQKEKTPDTPPLRTVTLTVRVHGFILEVSETKNPPIPDT
KLRGGGCKGSVSLALGVKLQTFAVSVTAHKGSVDPKSEQQQDLLQRAKDQSFRSVEGDPS
GLPLLAQAA

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_1|570_bp
atgcctgagcctccccgctgctccgtgggctcctgtgcggcccgagcctcccctacgagc
gctgccccctgctccaaggcgcccagtcctatcaaccacccaagggctgaggagtgcggg
cacatggcgcgggactggcaggcagctccacctgcggccccagtgcgggatccactggct
tcactcctgagccagcgagaccacgaaccccaccagaaggaagaaactccgaacacatcc
gaacatcagaaggaaaaaactccggacacgccgcctttaagaactgtaacactcaccgtg
agggtccacggcttcattcttgaagtcagtgagaccaagaacccaccaattccagacaca
aaactgagaggcggaggttgcaagggttcggtctcgctggctttaggagtgaagctgcag
accttcgccgtgagtgttacagctcataaaggcagtgtggacccaaagagtgagcagcag
caagatttattgcaaagagcgaaagatcaaagcttccgcagtgtggaaggggacccgagc
gggttgccactgctggctcaggcagcctga

>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_2|369_aa
MKETLEPDSSIGNEYGENENIMHQIGRTEDGVTISGHKHRVCLSVFSGQLVTAEYPPCKM
CLASSSSSAMTVVLHSSSQLSYEIVDLKHYIELGAASDLKKALIVHNFICTFAGDGERGS
IFIEFLNLRIGKYFKVISSFNVHNNPMRYLPNANTEDLAIFTAKSLPSWSLYGSFGKGSK
TVENTSQVGRSRGKRRGKKAHLLFLIRNSRVETQDLHPWDHTAFREPSTCQLQVGRGSSG
TWDPTGPGRVKSRFLPASPKGPLPPPQQEQSLSGNCGCLRLGLLFSTPVPQHRVRRRPAS
RGLADAHSPDHSDTCRGPAEPRCTATQRGGGSGLGPFSGPHPPPVTTVRCQRGGCGNGQR
GLAGGLVVF

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_2|1110_bp
atgaaggagacgctggaacctgacagcagtattggaaatgaatatggagaaaatgaaaat
attatgcaccaaattggcagaaccgaagacggagtgactattagtggacacaaacataga
gtgtgcctgagtgttttctcaggccagctggtgactgcagaatatccgccatgtaagatg
tgccttgcttcctcttcgtcttctgccatgactgtagtactacattcatcctcacaactg
tcctatgaaatagttgatcttaagcactacattgagttaggtgctgcaagtgatctcaaa
aaggctctcatcgtccataacttcatatgtacatttgctggggatggggagagagggagt
atttttatagagttcttaaatctcaggattggaaagtactttaaagttattagctcattt
aatgttcacaataatcccatgagatatttgccaaatgccaacactgaagatttagcaatt
ttcacggcaaagtccctgccctcatggtctttatatggaagttttggcaaaggctccaag
acagtagaaaatacatcccaagtgggaaggagtcgtggaaaaaggagaggaaagaaagcc
cacttgcttttcctaatcagaaactccagggtggagacgcaggatctgcatccctgggat
cacactgcctttcgagaaccatccacctgccagctccaagtaggtcgagggagcagcggc
acctgggatcccaccggaccgggaagagtcaaatccaggtttctccctgcttcaccaaaa
ggccccctgcctccaccgcaacaggaacagtctctgtctgggaactgcggttgcctaagg
ctcggtttgctcttcagcactccggtcccccaacaccgcgtcaggcggcgcccagcctcc
cggggactcgcagacgctcactccccagaccacagcgacacctgccgaggccccgcggaa
ccgcgctgcacagcaacccagcgcggcggggggagtggcctggggccattctccggcccc
caccccccgcccgtgaccaccgtgcgctgccagaggggaggctgcgggaatggccagcga
ggtctcgcagggggactggttgtcttttag

>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_3|307_aa
MKPRTLAVSVTVIKDGVSGVCSFRCSDVSGVYSFWWIRGLADFRSEAADLPDLWNFKLER
GDLGYLVEEISKQQSIQEEAEHRSLESLQPKHGIEEKNPFSGEKFKPAAEICISNEEPNF
NLQNNGERSPRDFVPYIPAASAVAKRGQSTAQAVASEGASPKPWHLPCGVEPAGTQTSRI
EVWEPLPRFQRMYGNARMFRQKFAAVVEHSWRTSARAVRKGNVGSEPPHRVLTKALSSGA
VRRQPPSSRLQNGRSTNSLHHVPGKATDTQHQSVKTARKRGQYPAKPHRWSCPRPWEPTS
CISVTWM

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_3|924_bp
atgaagccgcggaccctcgcagtgagtgttacagttattaaagatggtgtgtccggagtt
tgttccttcagatgttcagatgtgtctggagtttattccttctggtggattcgtggtctc
gctgacttcaggagtgaagctgcagaccttcccgatctgtggaacttcaaacttgagaga
ggtgatttagggtatctggtggaagaaatttctaagcagcaaagcattcaagaggaagca
gagcatagaagtttggaaagtttgcagcctaaacatggaatagaagagaaaaacccattt
tctggggagaaattcaagcctgctgctgaaatttgcataagtaatgaggagccaaatttt
aatctccaaaacaatggggaaaggtctccacgggactttgtgccttacatcccagccgct
tcagctgtggctaaaaggggccagagtacagctcaggctgtggcttcagagggtgcaagc
cccaagccttggcaccttccatgtggtgttgagcctgcaggtacacagacgtcaagaatt
gaggtttgggaacctctgcctagatttcagaggatgtatggaaatgccaggatgttcagg
cagaagtttgctgcagtggtggagcactcatggagaacctctgctagggcagtgaggaag
ggaaatgtggggtcagagcctccacacagagtccttactaaggcactgtctagtggagct
gtgagaagacagccaccatcatccagactccagaatggtagatccaccaacagcttgcac
catgtacctggaaaagccacagatactcagcaccagtctgtgaaaacagccaggaagagg
gggcaataccctgcaaaaccacacaggtggagctgcccaaggccgtgggaacccacctct
tgcatcagtgtgacctggatgtga

>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_4|214_aa
MYNQTKSKMVKGSHPSEKVLILYPVARPEQVFKVRSHQLTERSSFQDEDPVTTSQAHVTT
IPQPSSKRFAPFTQLAEEENVQAVFTNGPGWASDSTIIRRLCSKGGGHIIRRSMCHSANH
IIPQLPADKAMEWLKFQLRAHLVGRRDRLQFRGSPRPPSTSVDSLEGFTELRRVAILAVT
ICYNGGTQTKISRGNDTALMSGGTPGFFLSSQIG

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_4|645_bp
atgtacaatcaaacaaaatcgaagatggttaagggcagtcatcccagtgaaaaggtcctc
atcctttacccagttgctagacccgaacaagttttcaaagtcagatcccaccaactgaca
gagaggtcgagtttccaggatgaagaccctgtgacaacaagtcaagcgcacgtgacaaca
attccacagccttcctcaaagagatttgctccatttactcagctggcagaagaggaaaac
gtccaagctgtttttacaaatgggccaggttgggcctcagacagcactattatcagacga
ctttgcagcaaaggaggtgggcacattatccgaagatccatgtgtcatagcgcaaaccac
attattcctcagctgcccgctgacaaggcaatggaatggctgaagttccagctcagagct
catctggtgggaagaagagacaggctgcagttcagggggtccccaagaccaccgtcaact
tccgttgattctctcgaaggattcacagaactcagaagagttgctatacttgcagttaca
atttgttacaatggaggaacacagactaaaatcagcagaggaaatgatacggctctgatg
agtggaggaacaccagggttcttcctctcaagtcaaattggataa

>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_5|203_aa
MMLDIKQIQVIFLFEFKMGRKIAETTRNIDNAFGPGTANECTVQWQFKETRSVVVLVTVW
WSTAGLIHCSFLNPSGTIISEKYAQQTDEMHRKLQCLQPAFVNRKGPILLHDNAQPKFQK
LNKLGYKVLPHLPHSPDFSPTDYHFFKHLDNFLQGKCFPNKQDAENAFQEFVESRSMDFY
TAGINKLINHWQKCVDCNGSCFD

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_5|612_bp
atgatgttagacataaagcaaattcaagtgattttcttattcgagttcaaaatgggtcgt
aaaatagcagagacaactcgtaacatcgacaatgcatttggcccaggaactgctaacgaa
tgtacagtgcagtggcagttcaaggagacaaggagcgtagtggtcctggtcactgtttgg
tggtctacggccggtctgatccactgcagctttctgaatcccagcggaaccattatatct
gaaaagtatgctcagcaaactgatgagatgcaccgaaaactgcaatgcctgcagccggca
ttcgtcaacagaaagggcccaattcttcttcatgacaatgcacaaccaaagtttcaaaag
ttgaacaaattgggctacaaagttttgcctcatctgccacattcaccggacttctcgcca
actgactaccacttcttcaagcatctcgataactttttgcagggaaaatgcttccccaac
aagcaggatgcagaaaatgcattccaagagttcgtcgaatcccgaagcatggatttttac
actgcaggaataaacaaacttattaatcattggcaaaaatgtgttgattgcaatggttcc
tgttttgattaa

>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_6|873_aa
MGSSRLRVFDPHLERKDSAAALSDRELPLPTFDVPYFKYIDEEDEDDEWSSRSQSSTEDD
SVDSLLSDRYVVVSGTPEKILEHLLNDLHLEEVQDKETGSGFDLKYFEMLEENQIVSGAL
SFPRNWANITGHEVYMRELRGRDLVSSPQTVVGFKKYQGKEENSDVPRRKRKVLHLVSQW
IALYKDWLPEDEHSKMFLKTIYRNVLDDVYEYPILEKELKEFQKILGMHRRHTVDEYSPQ
KKNKALFHQFSLKENWLQHRGTVTETEEKHSYVSVKAKVSSIAQEILKVVAEKIQYAEED
LALVAITFSGEKHELQPNDLVISKSLEASGRIYVYRKDLADTLNPFAENEESQQRSMRIL
GMNTWDLALELMNFDWSLFNSIHEQELIYFTFSRQGSGEHTANLSLLLQRCNEVQLWVAT
EILLCSQLGKRVQLVKKFIKIAAHCKAQRNLNSFFAIVMGLNTASVSRLSQTWEKIPGKF
KKLFSELESLTHMIADTVRTLRHCRTNQFGDLSPKEHQELKSYVNHLYVIDSQQALFELS
HRIEPRHFELRECLCQARCFPVRKEVAEFYQYNPRHSQESQPKRVQEVMSATREGERFLH
ATLGTRRQKERFYRRASSRAGPFREMLHAAVMECGPQDTRAVRTGEQTSLTAGLSKPSKA
LLTQLLTIAWAYSTSTCSHLFPMPWTKGTFYIIHIWDFTSQSHSMSWGVVLDEYLLNNDA
SNLQVQAPSIVSTAMWSNFDAQNLFKSNQIDTTHLGNKPSQRATTSWGSRHSSPSNHTST
LTSRTGSESTTPEVCASCTWSRRPGTTVSPFFLEAPEQRGTLAELCSEATLSLIRAAESP
IVCSPVNQSSLFTAILTILSGLITLAAHRTHED

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_6|2622_bp
atgggcagctcccggctgagggtctttgaccctcatttggagaggaaagattccgccgcg
gcgctctcagaccgagagctgcccttgcctaccttcgatgtgccttatttcaaatacatc
gacgaggaggatgaggacgatgaatggagcagccgctcgcagtcttccaccgaggatgac
tcagtggactctctgctctctgacagatatgtggtggtgtccgggaccccggagaagatt
ttggagcaccttttgaatgacttgcacctggaagaagtccaggacaaagaaacaggttca
ggttttgacttgaaatattttgaaatgttagaggaaaatcaaattgtttctggagcttta
tcttttcccagaaattgggcaaacatcactgggcatgaggtttacatgagagaattacga
ggaagagatcttgtgtcatctccccagacggttgttggatttaaaaagtatcaaggcaaa
gaggaaaactcagacgttccgcgtaggaaacgtaaagtcttgcatcttgtttcccagtgg
attgctctgtacaaagactggttacctgaagatgaacattcaaaaatgtttttaaagacc
atatataggaatgtactggatgatgtttatgaatatccaatacttgaaaaagaattgaaa
gaatttcaaaagatacttggaatgcaccgtcgtcacactgtagatgaatattcaccacaa
aaaaagaataaagcccttttccaccaattcagtcttaaggagaactggctccagcataga
ggaactgtgactgaaacggaggaaaagcactcctatgtcagtgtgaaggcaaaagtttcc
agtatagcccaagagatcctaaaagtcgtggcagaaaagatccagtatgcagaagaggat
ctggctctggtggccatcacattctctggggaaaagcatgaacttcagccaaatgactta
gtcatctccaaatccctcgaggcatctggtcgaatatatgtctaccggaaagacctggcg
gacactttgaacccatttgcagaaaatgaggaatcacagcaaaggtcgatgaggattttg
ggaatgaacacttgggatcttgctctggaattaatgaattttgattggagtctattcaat
tcaattcacgagcaagagctgatctacttcacgttcagcagacagggaagtggggaacac
actgcaaatctcagccttctgctccagagatgcaatgaggtccagctttgggtggccacg
gagattctgctctgcagccagctgggcaagcgagtgcagctggtgaaaaaattcatcaaa
attgcggctcactgcaaagcccagagaaacctgaattctttctttgccattgtgatgggt
ctcaacactgcttctgtcagtcgactgtcgcagacctgggagaaaatccctgggaagttt
aagaaacttttctctgaacttgaaagtttaacacatatgatcgcagacactgtccgaacc
ctgagacactgcaggactaaccagtttggtgacctgtctccaaaagagcatcaagagtta
aagtcctatgttaatcacctgtatgtcattgacagccagcaggctctgtttgagctctca
cacaggatcgagcctcggcactttgagctacgggaatgtctatgccaagcacgttgcttt
cctgtgagaaaagaagttgctgagttttatcagtataacccaagacattcacaggaaagc
cagccaaagcgtgttcaggaagtgatgtcagccaccagagagggggagaggtttctccat
gctactctcgggacaagaaggcagaaggagaggttttatagaagggcatcctccagggct
ggtccattcagagaaatgctgcatgctgccgtcatggaatgtggcccacaggacaccaga
gccgtgagaaccggagagcagacttccctcacggctgggctgagcaaaccctccaaagcc
ctcctcacgcagttactaacaatagcatgggcttacagcacaagcacgtgttctcacctt
tttcctatgccctggactaaggggactttctacatcatccacatctgggatttcaccagt
caaagccattctatgagctggggtgttgtgctggatgaatacttgctcaataatgatgct
tcaaacctccaggtccaagctccaagcattgtcagcacagccatgtggagcaacttcgat
gcacagaacctcttcaagtccaaccaaatagacaccacccacttgggcaacaagccatct
cagagggcaaccacctcatggggctctcgacactcttcccctagcaaccatacttcaact
ttgacttcacgaacgggttccgagtcaaccacgccagaggtctgcgccagctgcacttgg
tctaggaggcctgggaccaccgtcagcccattcttccttgaggctccggaacagcgtggg
acattagctgagctgtgctcagaagcaactctctcgctgattagggctgccgagagtccc
atcgtctgctcacctgtcaatcaatcaagcctcttcactgccatcctgaccatcctgtca
gggctgatcaccttggctgctcacagaacccatgaggactga

>gi568815591r:22022409_22293661|GENSCAN_predicted_peptide_7|232_aa
XSHQKIEDSEESSDEILVRLTSAVQRELAAVIALKARKSAIEQDEENNDKHVAVTEAESV
PDSQAGVMCKLQERDEIGRIELVQKLAKENYQFLQTDKKEQEKSEHGEWMYLRVSAEGNN
HHIWNKEQQKAVAFQLAHFSFWSLEVYTSWRVRFAGSESSPHTVECITLDLLSSCSEWDA
ASGKHRQEIRGWKERKNESPCMAFPNQTGHPELKTGYARTFDSHFGLDLPVA

>gi568815591r:22022409_22293661|GENSCAN_predicted_CDS_7|699_bp
nngtctcatcagaaaattgaagactccgaagaaagcagtgatgaaattcttgtgcgtcta
acatctgcggtgcagagagagctagcagctgttattgctttgaaagcaaggaagtctgca
attgaacaagatgaagaaaacaacgacaaacatgtagctgtaacagaagccgaaagtgtt
ccagattctcaggcaggggtgatgtgcaagctccaggaaagagatgaaatcggacgaatt
gaactagtccagaagctggcaaaagaaaactatcagtttttgcagacggacaaaaaagaa
caggagaagtctgaacacggcgaatggatgtacctccgagtctctgcagaaggaaataac
caccatatctggaacaaggagcagcagaaagcagtggcattccagctggctcacttcagt
ttttggtctctagaggtgtacacttcttggcgagtgagatttgcggggagcgagtcctca
ccacacactgtggaatgcatcaccctggatttattgtcctcctgctctgaatgggatgca
gccagtgggaagcatcggcaagagatcagagggtggaaggagagaaagaatgaaagccct
tgtatggctttcccaaaccagacaggccatccagaactaaaaaccggctatgctagaact
tttgactctcactttggcctagacctccctgttgcctga