Result of FASTA (omim) for pF1KSDA0190
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0190, 803 aa
  1>>>pF1KSDA0190 803 - 803 aa - 803 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.2874+/-0.000419; mu= 1.0342+/- 0.026
 mean_var=181.4928+/-38.463, 0's: 0 Z-trim(117.4): 124  B-trim: 1374 in 2/53
 Lambda= 0.095202
 statistics sampled from 29158 (29288) to 29158 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.343), width:  16
 Scan time: 10.240

The best scores are:                                      opt bits E(85289)
NP_005144 (OMIM: 609818) ubiquitin carboxyl-termin ( 798) 5293 740.0 9.6e-213
NP_001259004 (OMIM: 609818) ubiquitin carboxyl-ter ( 802) 5253 734.5 4.3e-211
XP_011521742 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_006721395 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879358 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_011521743 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879356 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879355 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879354 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879353 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879357 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_011521745 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016879352 (OMIM: 609818) PREDICTED: ubiquitin c ( 602) 3984 560.1 9.9e-159
XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928)  271 50.2 4.8e-05
XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928)  271 50.2 4.8e-05
NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012)  271 50.3 5.1e-05
XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  271 50.3 5.5e-05
XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  271 50.3 5.5e-05
XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  271 50.3 5.5e-05
XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089)  271 50.3 5.5e-05
XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118)  271 50.3 5.6e-05
XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118)  271 50.3 5.6e-05
NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118)  271 50.3 5.6e-05
NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118)  271 50.3 5.6e-05
XP_005272731 (OMIM: 300050) PREDICTED: ubiquitin c ( 690)  239 45.8 0.00077
XP_011542290 (OMIM: 300050) PREDICTED: ubiquitin c ( 690)  239 45.8 0.00077
NP_004642 (OMIM: 300050) ubiquitin carboxyl-termin ( 963)  239 45.9   0.001
XP_016861124 (OMIM: 614471) PREDICTED: ubiquitin c ( 871)  233 45.0  0.0017
XP_005264888 (OMIM: 614471) PREDICTED: ubiquitin c (1268)  233 45.1  0.0023
XP_016861123 (OMIM: 614471) PREDICTED: ubiquitin c (1270)  233 45.1  0.0023
XP_016861122 (OMIM: 614471) PREDICTED: ubiquitin c (1281)  233 45.1  0.0024
XP_016861120 (OMIM: 614471) PREDICTED: ubiquitin c (1283)  233 45.1  0.0024
XP_016861121 (OMIM: 614471) PREDICTED: ubiquitin c (1283)  233 45.1  0.0024
XP_016861119 (OMIM: 614471) PREDICTED: ubiquitin c (1285)  233 45.1  0.0024
XP_016861118 (OMIM: 614471) PREDICTED: ubiquitin c (1303)  233 45.1  0.0024
XP_016861117 (OMIM: 614471) PREDICTED: ubiquitin c (1305)  233 45.1  0.0024
XP_016861116 (OMIM: 614471) PREDICTED: ubiquitin c (1307)  233 45.1  0.0024
NP_006668 (OMIM: 614471) ubiquitin carboxyl-termin (1318)  233 45.1  0.0024
XP_016861115 (OMIM: 614471) PREDICTED: ubiquitin c (1318)  233 45.1  0.0024
XP_016861114 (OMIM: 614471) PREDICTED: ubiquitin c (1320)  233 45.1  0.0024
XP_005264887 (OMIM: 614471) PREDICTED: ubiquitin c (1322)  233 45.1  0.0024
XP_016861113 (OMIM: 614471) PREDICTED: ubiquitin c (1332)  233 45.1  0.0024
XP_006713015 (OMIM: 614471) PREDICTED: ubiquitin c (1367)  233 45.1  0.0025
XP_006713014 (OMIM: 614471) PREDICTED: ubiquitin c (1368)  233 45.1  0.0025
XP_016861112 (OMIM: 614471) PREDICTED: ubiquitin c (1369)  233 45.1  0.0025
XP_006713013 (OMIM: 614471) PREDICTED: ubiquitin c (1369)  233 45.1  0.0025
XP_016861111 (OMIM: 614471) PREDICTED: ubiquitin c (1371)  233 45.1  0.0025
XP_016861110 (OMIM: 614471) PREDICTED: ubiquitin c (1371)  233 45.1  0.0025
NP_001186091 (OMIM: 614471) ubiquitin carboxyl-ter (1372)  233 45.1  0.0025
XP_006713012 (OMIM: 614471) PREDICTED: ubiquitin c (1373)  233 45.1  0.0025


>>NP_005144 (OMIM: 609818) ubiquitin carboxyl-terminal h  (798 aa)
 initn: 5293 init1: 5293 opt: 5293  Z-score: 3940.4  bits: 740.0 E(85289): 9.6e-213
Smith-Waterman score: 5293; 100.0% identity (100.0% similar) in 798 aa overlap (6-803:1-798)

               10        20        30        40        50        60
pF1KSD MKRAAMALHSPQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQEYQ
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005      MALHSPQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQEYQ
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KSD RIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGSIDC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGSIDC
          60        70        80        90       100       110     

              130       140       150       160       170       180
pF1KSD QYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSISTEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSISTEA
         120       130       140       150       160       170     

              190       200       210       220       230       240
pF1KSD LVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGALGSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGALGSD
         180       190       200       210       220       230     

              250       260       270       280       290       300
pF1KSD TRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILESSGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILESSGE
         240       250       260       270       280       290     

              310       320       330       340       350       360
pF1KSD GTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPSSSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPSSSS
         300       310       320       330       340       350     

              370       380       390       400       410       420
pF1KSD PVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSLQPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSLQPR
         360       370       380       390       400       410     

              430       440       450       460       470       480
pF1KSD GLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNM
         420       430       440       450       460       470     

              490       500       510       520       530       540
pF1KSD PVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFILNGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFILNGL
         480       490       500       510       520       530     

              550       560       570       580       590       600
pF1KSD HEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQA
         540       550       560       570       580       590     

              610       620       630       640       650       660
pF1KSD DFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARES
         600       610       620       630       640       650     

              670       680       690       700       710       720
pF1KSD VQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKE
         660       670       680       690       700       710     

              730       740       750       760       770       780
pF1KSD LLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQ
         720       730       740       750       760       770     

              790       800   
pF1KSD YQVVKPTAERTAYLLYYRRVDLL
       :::::::::::::::::::::::
NP_005 YQVVKPTAERTAYLLYYRRVDLL
         780       790        

>>NP_001259004 (OMIM: 609818) ubiquitin carboxyl-termina  (802 aa)
 initn: 5251 init1: 5251 opt: 5253  Z-score: 3910.7  bits: 734.5 E(85289): 4.3e-211
Smith-Waterman score: 5253; 99.5% identity (99.5% similar) in 799 aa overlap (8-803:4-802)

               10           20        30        40        50       
pF1KSD MKRAAMALHSP---QYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQ
              : ::   ::::::::::::::::::::::::::::::::::::::::::::::
NP_001     MPWLPSPGIGQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQ
                   10        20        30        40        50      

        60        70        80        90       100       110       
pF1KSD EYQRIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYQRIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGS
         60        70        80        90       100       110      

       120       130       140       150       160       170       
pF1KSD IDCQYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDCQYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYYSYLKDGGDDSIS
        120       130       140       150       160       170      

       180       190       200       210       220       230       
pF1KSD TEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDSPFPGAL
        180       190       200       210       220       230      

       240       250       260       270       280       290       
pF1KSD GSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVANGQILES
        240       250       260       270       280       290      

       300       310       320       330       340       350       
pF1KSD SGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKPS
        300       310       320       330       340       350      

       360       370       380       390       400       410       
pF1KSD SSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLIHKPVSL
        360       370       380       390       400       410      

       420       430       440       450       460       470       
pF1KSD QPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEF
        420       430       440       450       460       470      

       480       490       500       510       520       530       
pF1KSD TNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEEYLGFIL
        480       490       500       510       520       530      

       540       550       560       570       580       590       
pF1KSD NGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVT
        540       550       560       570       580       590      

       600       610       620       630       640       650       
pF1KSD RQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVA
        600       610       620       630       640       650      

       660       670       680       690       700       710       
pF1KSD RESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEI
        660       670       680       690       700       710      

       720       730       740       750       760       770       
pF1KSD SKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKV
        720       730       740       750       760       770      

       780       790       800   
pF1KSD INQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::
NP_001 INQYQVVKPTAERTAYLLYYRRVDLL
        780       790       800  

>>XP_011521742 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_011                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_011 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_006721395 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_006                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_006 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_016879358 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_016                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_011521743 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_011                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_011 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_016879356 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_016                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_016879355 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_016                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_016879354 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_016                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  

>>XP_016879353 (OMIM: 609818) PREDICTED: ubiquitin carbo  (602 aa)
 initn: 3984 init1: 3984 opt: 3984  Z-score: 2970.7  bits: 560.1 E(85289): 9.9e-159
Smith-Waterman score: 3984; 100.0% identity (100.0% similar) in 602 aa overlap (202-803:1-602)

             180       190       200       210       220       230 
pF1KSD GDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                     ::::::::::::::::::::::::::::::
XP_016                               MGDMPPSVTPRTCNSPQNSTDSVSDIVPDS
                                             10        20        30

             240       250       260       270       280       290 
pF1KSD PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVAN
               40        50        60        70        80        90

             300       310       320       330       340       350 
pF1KSD GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLF
              100       110       120       130       140       150

             360       370       380       390       400       410 
pF1KSD HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPVAIKIAELLENVTLI
              160       170       180       190       200       210

             420       430       440       450       460       470 
pF1KSD HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFV
              220       230       240       250       260       270

             480       490       500       510       520       530 
pF1KSD RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNKSSLSEKGRQEDAEE
              280       290       300       310       320       330

             540       550       560       570       580       590 
pF1KSD YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPR
              340       350       360       370       380       390

             600       610       620       630       640       650 
pF1KSD NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDA
              400       410       420       430       440       450

             660       670       680       690       700       710 
pF1KSD LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEY
              460       470       480       490       500       510

             720       730       740       750       760       770 
pF1KSD PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRID
              520       530       540       550       560       570

             780       790       800   
pF1KSD DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
       ::::::::::::::::::::::::::::::::
XP_016 DQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
              580       590       600  




803 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 00:33:04 2016 done: Thu Nov  3 00:33:06 2016
 Total Scan time: 10.240 Total Display time:  0.180

Function used was FASTA [36.3.4 Apr, 2011]
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