GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:17:55

Sequence gi568815586f:120587297_120796542 : 209246 bp : 48.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -   2700   2695    6                               1.05
 1.10 Term -   7032   6716  317  1  2   16   32   299 0.895  12.20
 1.09 Intr -  23610  23382  229  0  1   18   81   199 0.641   9.64
 1.08 Intr -  25185  25048  138  0  0   48  111    13 0.429   0.26
 1.07 Intr -  25362  25218  145  2  1   44   93    52 0.010   1.58
 1.06 Intr -  35194  34990  205  2  1   97   70    99 0.365   7.26
 1.05 Intr -  38646  38565   82  0  1   73   81    22 0.012  -0.79
 1.04 Intr -  44048  43899  150  2  0  -18   80   120 0.061   0.96
 1.03 Intr -  52681  52658   24  1  0  125   60    35 0.167   2.62
 1.02 Intr -  53382  53275  108  0  0   48   86   153 0.364  11.58
 1.01 Init -  54021  53518  504  0  0   78   50   430 0.356  31.19
 1.00 Prom -  59896  59857   40                              -3.56

 2.00 Prom +  61207  61246   40                              -2.86
 2.01 Init +  68824  68976  153  0  0   62   57   242 0.213  17.39
 2.02 Intr +  71672  71929  258  1  0   72   81   116 0.800   6.96
 2.03 Intr +  72582  72612   31  2  1   93   93    17 0.863   0.40
 2.04 Intr +  72900  73043  144  1  0   94   84   337 0.999  34.15
 2.05 Intr +  73435  73544  110  2  2   88   82   162 0.999  15.60
 2.06 Intr +  73775  73922  148  1  1  103  100   217 0.983  24.21
 2.07 Term +  79579  79604   26  2  2   93   54    28 0.082  -1.71
 2.08 PlyA +  80006  80011    6                               1.05

 3.00 Prom +  80631  80670   40                              -3.56
 3.01 Init + 100001 100412  412  1  1  103   77   581 0.935  53.18
 3.02 Intr + 106795 106973  179  2  2  117  100   302 0.997  33.94
 3.03 Intr + 107528 107704  177  1  0   50   86   169 0.999  13.02
 3.04 Intr + 107799 107856   58  2  1  106   78    45 0.994   3.76
 3.05 Term + 109020 109249  230  1  2   66   54   314 0.979  22.59
 3.06 PlyA + 114543 114548    6                               1.05

 4.00 Prom + 117999 118038   40                              -4.66
 4.01 Init + 123179 123422  244  1  1   82   70   601 0.991  53.60
 4.02 Intr + 125978 126091  114  0  0   96   96    93 0.999  11.32
 4.03 Intr + 129332 129443  112  0  1   77   83   171 0.999  14.94
 4.04 Intr + 129574 129746  173  1  2    0   36   214 0.973   6.99
 4.05 Intr + 132624 132732  109  1  1   66  100   166 0.976  14.94
 4.06 Intr + 138529 138635  107  1  2   76  105    46 0.096   4.96
 4.07 Intr + 139730 139893  164  0  2   87   94   127 0.812  12.89
 4.08 Intr + 149690 149839  150  1  0   98   66   315 0.755  30.66
 4.09 Intr + 150060 150171  112  2  1  100   82   113 0.999  11.85
 4.10 Intr + 150541 150692  152  2  2   71   86   128 0.999  10.78
 4.11 Intr + 150984 151154  171  2  0   98   89   203 0.998  21.54
 4.12 Intr + 151237 151374  138  0  0   28   95   301 0.993  25.46
 4.13 Intr + 151524 151619   96  2  0   25   44   160 0.814   5.51
 4.14 Intr + 151844 151900   57  1  0   28  109   112 0.977   6.38
 4.15 Intr + 152000 152113  114  1  0   94   18   337 0.264  27.94
 4.16 Intr + 152984 153262  279  1  0   40   53   183 0.232   7.67
 4.17 Intr + 172642 172797  156  0  0   99   80    81 0.956   8.61
 4.18 Term + 173893 174018  126  0  0   70   44   117 0.974   3.78
 4.19 PlyA + 174791 174796    6                              -0.45

 5.09 PlyA - 175954 175949    6                               1.05
 5.08 Term - 177774 177703   72  0  0   71   45    52 0.213  -2.89
 5.07 Intr - 179076 178967  110  1  2  128  100   -17 0.553   3.50
 5.06 Intr - 180297 180098  200  2  2   56   82   229 0.958  18.09
 5.05 Intr - 181192 181029  164  1  2   72  116   138 0.999  13.77
 5.04 Intr - 181763 181657  107  0  2  121   94   122 0.368  16.03
 5.03 Intr - 195471 195359  113  2  2   82  101     5 0.074   1.22
 5.02 Intr - 196876 196816   61  2  1   62   75    55 0.254  -0.61
 5.01 Intr - 204261 204173   89  2  2  104   55    99 0.547   7.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 138590 138635   46  1  1   71  105   120 0.880  10.90
S.002 Term + 141030 141080   51  2  0   68   43   114 0.881   2.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:120587297_120796542|GENSCAN_predicted_peptide_1|633_aa
MGRSRWRNGSASDAAAGTESPRPRARREPRRPSAGDSPRSSPSRPRAGGSGDDGEGRDAA
AGSASRGLQCAWGSTRWLPRAPSSRGAGRHRGLRELGSPDDCGVAGQEPGSRRLGSPGSR
AGPWRGARLPPLAAAAAAFSSDVLDSLLAMCELIAAGPALAWPGGGGARSLYARSPELPA
AGGADLGALPAVPGEPTPGSLAAQMLQKFLLSQSANSAVREQCGYICGTGSGAWPCTKKT
YWYCTVKANWVQQRKLPLLHGQGDYSAGSLQSRPKIARAGNGAAVGLVGGARHSADDKLD
SPRMTHRALDVHFVLTGESTAKRKEGQPRPSPWPPDTLHPDILLLTPLALQSRKKGPSCK
VSAVVRGNAVWNTMTVDKALCESMDGSLGGSIACRIGKTVSRVSIPKRFNIVNLPPGSWL
ITLRNAAISRAQYWSLLLANWALSSSCSQVSLHNVINVMDQYDILWKGKTIKISANQIMT
QSQRVDIPLRQDSEGILLALPAEGKLLLVGLMDRNGDKGTCQINGCIPVQEAKAEEILEK
GLEVWEYELRKNNFSDTGNFDFGIQEHINLGIKYDPSVGVYGLDFSAVLSRPGFGITDKK
HRTGCTGAKHRISKEETMHWLQQKCDGIMLPCK

>gi568815586f:120587297_120796542|GENSCAN_predicted_CDS_1|1902_bp
atggggcgcagccggtggaggaacgggtccgcctcggacgcggcggctggaacggagtcc
ccgcggccccgggctcgcagagagccccggaggccgagcgccggggacagtccccgttcc
tccccatcccgcccgcgggccggcggcagcggcgacgacggcgaaggtcgggacgccgcg
gccggcagcgcctcccggggcctgcagtgcgcctgggggagcacacgctggctcccccgc
gcgccctcctctcgcggcgccggccggcacaggggcctccgcgaactggggtccccggac
gactgcggcgtcgccgggcaggagccgggtagccggcggctaggcagccccgggtcccgg
gcagggccgtggcggggagcccggctgcccccgctcgccgccgccgccgccgccttcagc
agcgacgtcttggactcgcttttggcgatgtgcgagctcatcgcggcggggcccgcgctc
gcatggcccggcgggggcggcgcgcgcagcctctacgcccggagcccggagctcccggcg
gctggcggtgcagatctgggggcgctgccggctgtccccggagagcccacccccggctcc
ctggcggcccagatgctacagaaattcctgctctcgcagtcagccaacagtgcagtccgt
gagcagtgcggttacatctgtggcactgggagtggtgcctggccctgcaccaagaagacc
tactggtactgcacggtgaaagcaaactgggttcagcaaaggaagctcccattgctgcat
ggacagggcgattattcagcaggctctctccagtcccgccccaaaattgcgagggcaggc
aacggtgcagcagtggggctggtcggcggtgccagacactctgctgatgacaagctagac
agccccagaatgacccacagggcccttgatgtgcattttgtgctcactggagagtccaca
gcaaagagaaaggagggtcagccacggccttctccttggccgccagacaccctccacccc
gacatcctgctccttactcccctcgccctacagtccaggaagaagggccccagctgcaaa
gtgagtgccgtggtcagaggtaatgctgtgtggaataccatgacggtggataaggcactc
tgtgagtccatggatggtagtcttggcggaagcattgcatgcaggataggcaaaaccgta
tccagagtgtctattccgaagaggttcaatatagtcaacctgcctccaggtagctggctg
atcaccctgaggaatgctgccatatcgagggctcagtattggtctctgctgctggcaaat
tgggcactcagcagtagctgtagccaggtcagcttgcataatgtcatcaatgtaatggac
cagtatgatatcttgtggaagggaaaaacgatcaagatctctgccaaccaaataatgaca
caaagccagagagttgatatacccctgaggcaggacagtgaaggtatattgctggccttg
ccagctgaaggcaaattgcttctcgtgggccttatggacaggaatggagacaaaggcact
tgccaaatcaatggctgcataccagttcaagaggccaaagcagaagaaatcctggagaag
ggtctagaggtatgggagtatgagttgagaaaaaataacttctcagatactggaaacttt
gattttgggatccaggaacacatcaatctgggtatcaaatatgacccaagtgtgggtgtc
tatggcctggacttctctgcggtgctgagtaggccgggtttcggcatcacagacaagaag
cacaggacaggctgcactggggccaaacacagaatcagcaaagaggagaccatgcactgg
ctccaacagaagtgtgatgggatcatgcttccttgcaaataa

>gi568815586f:120587297_120796542|GENSCAN_predicted_peptide_2|289_aa
MVVQTSEEGLAADAELPGPLLMLAQNCAVMHNLLGPACIFLRKGFAENRQPAQGNWQLTN
LSFLQACSLEMSLPSVLTPRFRVALIAQETWALLEAGDMCFLDPGSSQKHWWPPGSYVVS
CDPMTGERTGMGVKLEKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMP
TEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGE
ISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR

>gi568815586f:120587297_120796542|GENSCAN_predicted_CDS_2|870_bp
atggtggtgcagacgagcgaggaggggctggcggctgacgccgagctcccgggaccgctc
ctgatgctggcccagaactgcgcagtcatgcacaacctgctgggccctgcctgcattttc
ctgcgcaagggcttcgctgagaacaggcagcctgcccagggcaactggcagctcaccaac
ctgagcttcctccaggcctgctccttggagatgtctctgccatctgttctgacgcctaga
ttcagggttgccttgattgcccaggagacctgggcactgcttgaggctggagacatgtgc
tttttggaccctggctccagccagaagcactggtggcccccggggtcctatgtggtgtcc
tgtgatcccatgacaggggaacgtacagggatgggggtcaaattggagaaggatagatca
ctgcgaccagaggaaattgaagagctccgagaggccttcagagaattcgacaaggacaag
gatggctacatcaactgccgggatctgggcaactgcatgcgcaccatgggctacatgccc
accgagatggagctcatcgaactgtcccagcagatcaacatgaacctgggtggccatgta
gattttgatgacttcgtggagctaatggggcctaaactcctggcagagacagcagatatg
attggtgtaaaggaactgcgagatgctttccgagagtttgacaccaatggtgatggggaa
ataagcaccagtgagctgcgagaggctatgaggaagctcctgggtcatcaggtgggacac
cgagacatagaggaaattatccgagatgtggacctcaatggggatggacgagtggacttt
gaagagtttgtccggatgatgtcccgctga

>gi568815586f:120587297_120796542|GENSCAN_predicted_peptide_3|351_aa
MLGAWAVEGTAVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLPESVIWAVNAGGEAHV
DVHGIHFRKDPLEGRVGRGESPPAEPRDPGPAVLGAAGRGLRAPSPFRPWGRVSGAKFLS
AASSGARSELRAWHWLQASDYGMKLPILRSNPEDQILYQTERYNEETFGYEVPIKEEGDY
VLVLKFAEVYFAQSQQKVFDVRLNGHVVVKDLDIFDRVGHSTAHDEIIPMSIRKGKLSVQ
GEVSTFTGKLYIEFVKGYYDNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDE
GSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILVAFGVFIPTLFCLCRL

>gi568815586f:120587297_120796542|GENSCAN_predicted_CDS_3|1056_bp
atgctgggagcctgggcggttgagggaaccgctgtggcgctcctgcgactgctgctgctg
ctgctgccgccggcgatccggggacccgggctcggcgtggccggcgtggccggcgcggcg
ggggccgggctgcccgagagcgtcatttgggcggtcaacgcgggtggagaggcgcatgtg
gacgtgcacgggatccacttccgcaaggaccctttggaaggccgggtgggccgaggtgag
agtccccctgccgagccgcgggatccagggcctgctgtgctgggcgcagccggccggggg
ctgcgggccccgagcccctttcgaccctggggccgcgtctctggagcgaagtttctctct
gcagcttcttcgggggcccgctctgagctcagggcctggcactggctccaagcctcagac
tatggcatgaaactgccaatcctgcgttccaaccctgaggaccagatcctgtatcaaact
gagcggtacaatgaggagacctttggctacgaagtgcccatcaaagaggagggggactac
gtgctggtcttgaaatttgcagaggtctactttgcacagtcccagcaaaaggtatttgat
gtacgattgaatggccacgtcgtggtgaaggacttggatatctttgatcgtgttgggcat
agcacagctcacgatgaaattatacctatgagcatcagaaaggggaagctgagtgtccag
ggggaggtgtccaccttcacagggaaactctacattgagtttgtcaaggggtactatgac
aatcccaaggtctgtgcactctacatcatggctgggacagtggatgatgtaccaaagctt
cagcctcatccgggattggagaagaaagaagaggaagaagaagaagaagaatatgatgaa
gggtctaatctcaaaaaacagaccaataagaaccgggtgcagtcaggcccccgcacaccc
aacccctatgcctcggacaacagcagcctcatgtttcccatcctggtggccttcggagtc
ttcattccaaccctcttctgcctctgccggttgtga

>gi568815586f:120587297_120796542|GENSCAN_predicted_peptide_4|857_aa
MSGSNPKAAAAASAAGPGGLVAGKEEKKKAGGGVLNRLKARRQAPHHAADDGVGAAVTEQ
ELLALDTIRPEHVLRLSRVTENYLCKPEDNIYSIDFTRFKIRDLETGTVLFEIAKPCVSD
QEEDEEEGGGDVDISAGRFVRYQFTPAFLRLRTVGATVEFTVGDKPVSNFRMIERHYFRE
HLLKNFDFDFGFCIPSSRNTCEHIYEFPQLSEDVIRLMIENPYETRSDSFYFVDNKLIMH
NKADYAYNGGHTPEQRARSGRSRSLGLCLSPMAAALLARASGPARRALCPRAWRQLHTIY
QSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELG
GAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKI
GCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKG
ISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLD
MGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTW
RAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE
IYEGTSEIQRLDQPPGRRKEGPRLPESGSKAVEASSPRWENTEPREAAIVLTSALGGGPG
QPVRGLALVLVPAGLSLGKGAPEAKVQALNPLGQCRSQQLEEKTGAVTGYVTICLGIKTP
SRHDSNRRCEEIQSLMAKAQTQKLEAHVVATLQQLQERALDFKGKAEEETDDGWSGKNFV
MGESLRMRQLESEPAEI

>gi568815586f:120587297_120796542|GENSCAN_predicted_CDS_4|2574_bp
atgagcgggtctaacccgaaggctgcggccgcggcgtcggcggctgggcccggggggctg
gtggctggcaaggaggagaagaagaaggcgggcggcggcgtcctgaaccgcctgaaggcg
cggcggcaggcgccccaccacgcggccgacgacggcgtcggggcagcggtcacggagcag
gagctgctggcgctggacaccatccggcccgagcacgtcctgcgcctcagccgggtcacc
gagaattatttatgtaaacccgaagacaacatctacagtattgatttcacccgcttcaaa
attcgagatttggagacagggacagtactttttgagattgccaaaccttgcgtttcagac
caggaggaggatgaggaggagggaggtggagacgtggacatcagcgcaggacgttttgtc
cgctatcagttcacaccggcatttctccgcctccggacagtcggggctacggtggagttc
acagtgggagacaaacctgtttcaaacttccggatgatcgaacggcactatttccgggaa
cacttgctgaaaaactttgactttgattttggcttctgcatccccagcagtaggaacact
tgtgaacatatctatgagtttccccagctttcggaggatgtcattcgtctaatgattgaa
aatccttacgagacccgctctgacagcttctactttgttgacaacaagctgataatgcac
aacaaggctgattatgcctataatggaggccacactccggaacagcgcgctcgcagcggg
aggtcgcgaagcctgggactgtgtctgtcgcccatggccgccgcgctgctcgcccgggcc
tcgggccctgcccgcagagctctctgtcctagggcctggcggcagttacacaccatctac
cagtctgtggaactgcccgagacacaccagatgttgctccagacatgccgggactttgcc
gagaaggagttgtttcccattgcagcccaggtggataaggaacatctcttcccagcggct
caggtgaagaagatgggcgggcttgggcttctggccatggacgtgcccgaggagcttggc
ggtgctggcctcgattacctggcctacgccatcgccatggaggagatcagccgtggctgc
gcctccaccggagtcatcatgagtgtcaacaactctctctacctggggcccatcttgaag
tttggctccaaggagcagaagcaggcgtgggtcacgcctttcaccagtggtgacaaaatt
ggctgctttgccctcagcgaaccagggaacggcagtgatgcaggagctgcgtccaccacc
gcccgggccgagggcgactcatgggttctgaatggaaccaaagcctggatcaccaatgcc
tgggaggcttcggctgccgtggtctttgccagcacggacagagccctgcaaaacaagggc
atcagtgccttcctggtccccatgccaacgcctgggctcacgttggggaagaaagaagac
aagctgggcatccggggctcatccacggccaacctcatctttgaggactgtcgcatcccc
aaggacagcatcctgggggagccagggatgggcttcaagatagccatgcaaaccctggac
atgggccgcatcggcatcgcctcccaggccctgggcattgcccagaccgccctcgattgt
gctgtgaactacgctgagaatcgcatggccttcggggcgcccctcaccaagctccaggtc
atccagttcaagttggcagacatggccctggccctggagagtgcccggctgctgacctgg
cgcgctgccatgctgaaggataacaagaagcctttcatcaaggaggcagccatggccaag
ctggccgcctcggaggccgcgaccgccatcagccaccaggccatccagatcctgggcggc
atgggctacgtgacagagatgccggcagagcggcactaccgcgacgcccgcatcactgag
atctacgagggcaccagcgaaatccagcggctggaccagcctccaggcaggaggaaggaa
ggccccagattgccagagtcggggagcaaagctgtggaggcctcgagccccaggtgggag
aacacagaacctcgagaagcagccattgtgctcactagcgcgctcgggggcggccctggc
cagccagtgcgggggcttgccctggtcctggtgcctgcagggctttctctgggcaaaggt
gcccctgaagccaaggtccaagctcttaaccctctgggccagtgtcgatctcagcagctg
gaagagaaaacaggagctgtcacaggatatgttactatctgcctggggataaaaacccca
tcaaggcacgacagcaaccgcaggtgtgaggaaattcaatctctaatggcaaaggctcaa
acacaaaagctagaagctcacgtggtggctacactccagcagctccaggaaagggctctg
gatttcaagggaaaggctgaggaggaaacagatgatggctggagcgggaagaattttgtg
atgggagagtctctgcgcatgagacagttggaatctgaacctgcagaaatttga

>gi568815586f:120587297_120796542|GENSCAN_predicted_peptide_5|305_aa
XSLNMDFENQDKEKDSNSSSGSFNGNSTNNNYQKVELGIEAIVSLYPRSCRISFGCCGRF
TAAELLSFSLSVMLVLIWVLTGHWLLMDALAMGLCVAMIAFVRLPSLKVSCLLLSGLLIY
DVFWVFFSAYIFNSNVMVKVATQPADNPLDVLSRKLHLGPNVGRDVPRLSLPGKLVFPSS
TGSHFSMLGIGDIVMPGLLLCFVLRYDNYKKQASGDSCGAPGPANISGRMQKVSYFHCTL
IGYFVGLLTATVASRIHRAAQPALLYLVPFTLLPLLTMAYLKGDLRRMWSEPFHSKSSSS
RFLEV

>gi568815586f:120587297_120796542|GENSCAN_predicted_CDS_5|918_bp
nngtcccttaatatggactttgaaaatcaagataaggagaaagacagtaatagttcttct
gggtctttcaatggcaacagcaccaataataattaccagaaggttgagcttggcatagag
gccattgtcagcctctacccacgttcttgcaggatttcctttggttgctgtggacgtttc
actgctgctgagttgctgtcattctctctgtctgtcatgctcgtcctcatctgggttctc
actggccattggcttctcatggatgcactggccatgggcctctgtgtcgccatgatcgcc
tttgtccgcctgccgagcctcaaggtctcctgcctgcttctctcagggcttctcatctat
gatgtcttttgggtatttttctcagcctacatcttcaatagcaacgtcatggtgaaggtg
gccactcagccggctgacaatccccttgacgttctatcccggaagctccacctggggccc
aatgttgggcgtgatgttcctcgcctgtctctgcctggaaaactggtcttcccaagctcc
actggcagccacttctccatgttgggcatcggagacatcgttatgcctggtctcctacta
tgctttgtccttcgctatgacaactacaaaaagcaagccagtggggactcctgtggggcc
cctggacctgccaacatctccgggcgcatgcagaaggtctcctactttcactgcaccctc
atcggatactttgtaggcctgctcactgctactgtggcgtctcgcattcaccgggccgcc
cagcccgcccttctctatttggtgccatttactttattgccactcctcacgatggcctat
ttaaagggcgacctccggcggatgtggtctgagcctttccactccaagtccagcagctcc
cgattcctggaagtatga