GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:16:44

Sequence gi568815585r:83779420_83981507 : 202088 bp : 35.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  44965  45428  464  2  2   92   53   149 0.399   6.03
 1.02 PlyA +  45615  45620    6                               1.05

 2.02 PlyA -  46848  46843    6                               1.05
 2.01 Sngl -  81066  80659  408  0  0   69   39   163 0.930   5.54
 2.00 Prom -  89854  89815   40                              -6.25

 3.09 PlyA -  91087  91082    6                               1.05
 3.08 Term - 102259  99998 2262  1  0   65   47  1787 0.620 156.65
 3.07 Intr - 102708 102585  124  2  1   36   86    89 0.594   3.17
 3.06 Intr - 102953 102869   85  0  1  138   68    78 0.402   8.76
 3.05 Intr - 127308 127004  305  2  2   42   80   234 0.230  13.31
 3.04 Intr - 128362 127916  447  0  0   74  -11   353 0.478  15.54
 3.03 Intr - 132087 132045   43  1  1    2  121    63 0.607  -2.62
 3.02 Intr - 133715 133398  318  0  0   83   90   157 0.247  10.41
 3.01 Init - 176086 176047   40  1  1   79   79    56 0.327   4.20
 3.00 Prom - 179777 179738   40                              -7.35

 4.02 PlyA - 180015 180010    6                               1.05
 4.01 Sngl - 182819 182010  810  2  0   44   48   311 0.787  18.23
 4.00 Prom - 183077 183038   40                              -5.25

 5.02 PlyA - 183134 183129    6                              -3.24
 5.01 Sngl - 184091 183177  915  2  0   48   43   702 0.995  57.76
 5.00 Prom - 184138 184099   40                             -18.07

 6.00 Prom + 184140 184179   40                             -18.08
 6.01 Init + 184186 186287 2102  0  2   70   53   721 0.577  54.34
 6.02 Term + 188262 188376  115  0  1   84   38    82 0.825  -0.14
 6.03 PlyA + 188448 188453    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  52598  52645   48  1  0   60   87    70 0.810   5.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:83779420_83981507|GENSCAN_predicted_peptide_1|154_aa
XVGQELKTHRMVGLKELVTQMAQTCPLSPHCGKQEGEKKGEKSCSPSGSLDLGPPQASAV
TPTLGLCSSWHLQASRHHCVPRCLQWKPLAGHLVQLQPCRKPTPMPVPGAACPTTAACLV
VCSGQTLRSLSYTPLVTLPQAHLWQHEIQASSMS

>gi568815585r:83779420_83981507|GENSCAN_predicted_CDS_1|465_bp
natgtgggacaagaactcaagacccacagaatggtgggattgaaagagctggtaacacaa
atggctcaaacatgccccctctctccacattgtgggaaacaagaaggagagaagaaagga
gagaagagctgcagcccttcagggagcctagacctaggacctccccaagccagtgctgtg
acacccactttagggctctgcagttcctggcatctccaagcttccaggcaccactgtgtt
ccccggtgcctgcagtggaagccacttgcaggacacttggtccagctgcagccttgcagg
aagccgacgcccatgccagtgcctggagctgcctgccccaccacagctgcttgcctggtt
gtgtgcagtggccagactctgcgctcgctctcttacacaccccttgtcactctgccccag
gctcacctttggcagcatgagatccaggccagtagcatgagctga

>gi568815585r:83779420_83981507|GENSCAN_predicted_peptide_2|135_aa
MKESKKESKKERKKESKKERKKERKKERERERERERKKERKKERKKERERERKRERGKKK
ERKRERKERKKRKKKKRKEEKRKKKKERERKRKERKEGEERERKKEGKKERKRKKKGRKE
ERKRKKERKRIIRGD

>gi568815585r:83779420_83981507|GENSCAN_predicted_CDS_2|408_bp
atgaaagaaagtaagaaagaaagtaagaaagaaagaaagaaagaaagtaagaaagaaaga
aagaaagaaagaaagaaagaaagagagagagagagagagagagagagaaagaaagaaaga
aagaaagaaagaaagaaagaaagagaaagagagagaaagagagaaagaggaaagaaaaaa
gaaagaaagagagaaagaaaagaaagaaagaaaagaaaaaagaaaaagagaaaggaagaa
aaaagaaagaagaagaaagagagagaaagaaagaggaaagaaaggaaggaaggagaagaa
agagaaagaaagaaggaaggaaagaaagaaagaaaaagaaagaagaaaggaaggaaagaa
gaaagaaaaagaaagaaagaaagaaaaagaatcatcaggggtgattaa

>gi568815585r:83779420_83981507|GENSCAN_predicted_peptide_3|1207_aa
MLTVQMKLNTETAETKETCFICGPKTLALVTDWEGSLPLVFNHCRDASLSIHPSFKGVRP
CRDACLSPSPLAASPAFLGEGQVPQPRISAPQSLISTPQPLISVPQSLISTTPLPTFLED
HQGRRASGNSHSGRAGSRLGERLPALPVSGPSGAEVAGRGYAAHRGPDENLVSKPPDETR
TANAGFTAEQPLLGVSPRARAFHSPSSGLANGLQLLCPWAPLPGPQAPMMPPGSFWGLSQ
VEQEALASAWASCCGQPLAYHPPSPGSGVDTLGPALSTGPWRLESGAAGTCRCAWTEAVP
HVPTLQNVLTCPRPHSSLGTKQNDSETALPAESPEVPRMGGTEAPPGEDSPSLMDRPFLV
QIPDCTHRTLDKSASVHIAPECPGDNSPPALRPPPRNSERAEEREGEQEKKSYTGGTGQH
LGGTSGQPATTARTPPAASTTEAAENPALYQRGKCGGVREEGIHPHPPKPFSSPFLASDI
GALNELELCLWRAGWSLLLCDEIGDELLALKMLLWILLLETSLCFAAGNVTGDVCKEKIC
SCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANFYNAVSLHM
ENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDIDPGA
FQDLNKLEVLILNDNLISTLPANVFQYVPITHLDLRGNRLKTLPYEEVLEQIPGIAEILL
EDNPWDCTCDLLSLKEWLENIPKNALIGRVVCEAPTRLQGKDLNETTEQDLCPLKNRVDS
SLPAPPAQEETFAPGPLPTPFKTNGQEDHATPGSAPNGGTKIPGNWQIKIRPTAAIATGS
SRNKPLANSLPCPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHS
IRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNL
EYLNVEYNAIQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGVSLSKLSLHNNYFMYL
PVAGVLDQLTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDF
MLLSNDEICPQLYARISPTLTSHSKNSTGLAETGTHSNSYLDTSRVSISVLVPGLLLVFV
TSAFTVVGMLVFILRNRKRSKRRDANSSASEINSLQTVCDSSYWHNGPYNADGAHRVYDC
GSHSLSD

>gi568815585r:83779420_83981507|GENSCAN_predicted_CDS_3|3624_bp
atgctgactgtccagatgaagctaaacactgagacagcagagacaaaggagacttgtttt
atctgtggacccaaaactctggcactggtcacggactgggaaggcagccttcccttggtg
tttaatcattgcagggacgcctctctgagtattcacccaagtttcaaaggtgtcagacca
tgcagggatgcctgccttagtccttcacccttagcggcaagtcccgcttttctgggggag
gggcaagtaccccaacctcgtatctctgcaccccaatcccttatttccacaccccaacct
cttatttctgtgccccaatcccttatttccacgactccccttcccacttttctggaggac
catcagggacgccgagcttcgggtaactctcacagtggaagagcaggttcgcgccttgga
gagcgtcttccggcactaccagtatctgggccctctggagcggaagtggctggccgggga
tatgcagctcacagaggtccagatgaaaacctggtttcaaaaccgccagatgaaacacga
acggcaaatgcaggattcacagctgaacagccccttcttggggtctctccacgcgcccgg
gctttccactcaccgtcttctggccttgccaacggcctgcagctgctgtgcccttgggct
cccctgccagggccccaggctccgatgatgccccctggttccttctggggtctctcacaa
gtggaacaagaggccctggcctctgcgtgggcttcctgctgcgggcagcctctggcctac
caccccccaagcccaggaagtggcgtggatacactgggaccagccctgtccacagggccc
tggaggctggaaagcggggcagctgggacctgccgctgtgcctggactgaagccgtcccc
cacgtccctaccctccagaatgtgctcacctgtccccgtcctcacagcagcctcgggaca
aaacagaatgactcagagacagcacttcctgcagaaagtccggaagtgcccagaatggga
ggcacggaagcccctcccggggaggactctccctcactgatggacagaccattcttggtg
cagattcctgactgcacgcaccgaaccttagacaagagcgcatccgtccacatcgcccca
gagtgcccaggagacaactcgccccccgccctccgcccccctccacgtaattccgaaaga
gcagaagaaagagaaggagaacaggaaaagaagagctacaccgggggaactggacagcac
ctcggggggacttctgggcaacccgcaaccacagcaagaactccaccagcagcctcaaca
acagaagccgcggaaaaccctgctttgtatcagagaggcaagtgcgggggggttagggag
gaaggaatccacccccacccccccaaacccttttcttctcctttcctggcttcggacatt
ggagcactaaatgaacttgaattgtgtctgtggcgagcaggatggtcgctgttactttgt
gatgagatcggggatgaattgctcgctttaaaaatgctgctttggattctgttgctggag
acgtctctttgttttgccgctggaaacgttacaggggacgtttgcaaagagaagatctgt
tcctgcaatgagatagaaggggacctacacgtagactgtgaaaaaaagggcttcacaagt
ctgcagcgtttcactgccccgacttcccagttttaccatttatttctgcatggcaattcc
ctcactcgacttttccctaatgagttcgctaacttttataatgcggttagtttgcacatg
gaaaacaatggcttgcatgaaatcgttccgggggcttttctggggctgcagctggtgaaa
aggctgcacatcaacaacaacaagatcaagtcttttcgaaagcagacttttctggggctg
gacgatctggaatatctccaggctgattttaatttattacgagatatagacccgggggcc
ttccaggacttgaacaagctggaggtgctcattttaaatgacaatctcatcagcacccta
cctgccaacgtgttccagtatgtgcccatcacccacctcgacctccggggtaacaggctg
aaaacgctgccctatgaggaggtcttggagcaaatccctggtattgcggagatcctgcta
gaggataacccttgggactgcacctgtgatctgctctccctgaaagaatggctggaaaac
attcccaagaatgccctgatcggccgagtggtctgcgaagcccccaccagactgcagggt
aaagacctcaatgaaaccaccgaacaggacttgtgtcctttgaaaaaccgagtggattct
agtctcccggcgccccctgcccaagaagagacctttgctcctggacccctgccaactcct
ttcaagacaaatgggcaagaggatcatgccacaccagggtctgctccaaacggaggtaca
aagatcccaggcaactggcagatcaaaatcagacccacagcagcgatagcgacgggtagc
tccaggaacaaacccttagctaacagtttaccctgccctgggggctgcagctgcgaccac
atcccagggtcgggtttaaagatgaactgcaacaacaggaacgtgagcagcttggctgat
ttgaagcccaagctctctaacgtgcaggagcttttcctacgagataacaagatccacagc
atccgaaaatcgcactttgtggattacaagaacctcattctgttggatctgggcaacaat
aacatcgctactgtagagaacaacactttcaagaaccttttggacctcaggtggctatac
atggatagcaattacctggacacgctgtcccgggagaaattcgcggggctgcaaaaccta
gagtacctgaacgtggagtacaacgctatccagctcatcctcccgggcactttcaatgcc
atgcccaaactgaggatcctcattctcaacaacaacctgctgaggtccctgcctgtggac
gtgttcgctggggtctcgctctctaaactcagcctgcacaacaattacttcatgtacctc
ccggtggcaggggtgctggaccagttaacctccatcatccagatagacctccacggaaac
ccctgggagtgctcctgcacaattgtgcctttcaagcagtgggcagaacgcttgggttcc
gaagtgctgatgagcgacctcaagtgtgagacgccggtgaacttctttagaaaggatttc
atgctcctctccaatgacgagatctgccctcagctgtacgctaggatctcgcccacgtta
acttcgcacagtaaaaacagcactgggttggcggagaccgggacgcactccaactcctac
ctagacaccagcagggtgtccatctcggtgttggtcccgggactgctgctggtgtttgtc
acctccgccttcaccgtggtgggcatgctcgtgtttatcctgaggaaccgaaagcggtcc
aagagacgagatgccaactcctccgcgtccgagattaattccctacagacagtctgtgac
tcttcctactggcacaatgggccttacaacgcagatggggcccacagagtgtatgactgt
ggctctcactcgctctcagactaa

>gi568815585r:83779420_83981507|GENSCAN_predicted_peptide_4|269_aa
MVKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTR
QKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCR
RTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNE
NKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKEIETQKTLQKINESRSWFF

>gi568815585r:83779420_83981507|GENSCAN_predicted_CDS_4|810_bp
atggtaaagggatcaattcaacaagaggagctaactatcctaaatatttatgcacccaat
acaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcc
cacacattaataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagtcaacaaggatacccaggaattgaactcagctctgcaccaagcagacctaata
gacatctacagaactctccaccccaaatcaacagaatatacatttttttcagcaccacac
cacacctattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaga
agaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcagg
attaagaatctcactcaaagccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgag
aacaaagacaccacataccagaatctctgggacgcattcaaagcagtgtgtagagggaaa
ttcatagcactaaatgcctacaagagaaagcaggaaagatccaaaattgacaccctaaca
tcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggtttttttga

>gi568815585r:83779420_83981507|GENSCAN_predicted_peptide_5|304_aa
MENDFDELREEGFRRSNYSELREDIQTKGKEVENFEKNLEECITRITNTEKCLKELMELK
TKARELREECRSLRSRCDQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVK
RPNLRLIGVPESDVENGTKLENTLQDIIQENFPNLARQANVQIQEIQRTPQRYSSRRATP
RHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADLLAETLQARREWGPIFNILKEK
NFQPRISYPAKLSFISEGEIKYFIDKPMLRYFVTTRPALKELLKEALNMERNNRYQPLQN
HDKM

>gi568815585r:83779420_83981507|GENSCAN_predicted_CDS_5|915_bp
atggagaatgattttgacgagctgagagaagaaggcttcagacgatcaaattactctgag
ctacgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaa
gaatgtataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaa
accaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgcgatcaactg
gaagaaagggtatcagcaatggaagatgaaatgaatgaaatgaagcgagaagggaagttt
agagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaa
agaccaaatctacgtctgattggtgtacctgaaagtgatgtggagaatggaaccaagttg
gaaaacactctgcaggatatcatccaggagaacttccccaatctagcaaggcaggccaac
gttcagattcaggaaatacagagaacgccacaaagatattcctcgagaagagcaactcca
agacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagcc
agagagaaaggtcgggttaccctcaaaggaaagcccatcagactaacagcggatctcttg
gcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaag
aattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaata
aaatactttatagacaagccaatgctgagatattttgtcaccaccaggcctgccctaaaa
gagctcctgaaggaagcgctaaacatggaaaggaacaaccggtaccagccgctgcaaaat
catgacaaaatgtaa

>gi568815585r:83779420_83981507|GENSCAN_predicted_peptide_6|738_aa
MDTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPIKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGVLPNSFYEASIILRPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLHIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTSDVKDLFKENYKPL
LKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVINRFNAIPIKLPMTFFTELEKTTLKFI
WNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTACYWYQNRDIDQWNRTEPSEIM
PRIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLN
VRPKTIKTLEENLGITIQDIGVGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIR
VNRQPTTWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAA
KKHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNSSGAENKGSYFENEHSQDYE
QPAFLMQRHLQEHLYFSM

>gi568815585r:83779420_83981507|GENSCAN_predicted_CDS_6|2217_bp
atggatacattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaatagtttaccaatcaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggagtcctccctaactca
ttttatgaggccagcatcattctgagaccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattacatattgatgggacgtatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtttatcta
gaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagtgatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaagaggacacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaaggtaattaacagattcaatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactacgttaaagttcata
tggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgc
tactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataatg
ccacgtatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaag
gattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaa
ctggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagatttaaat
gttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacata
ggcgtgggcaaggacttcatgtccaaaacaccaaaagcaatggcaacaaaagccaaaatt
gacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcaga
gtgaacaggcaacctacaacatgggagaaaattttcgcaacctactcatctgacaaaggg
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaacccc
atcaaaaagtgggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagcc
aaaaaacacatgaagaaatgctcatcatcactggccatcagagaaatgcaaatcaaaacc
actatgagatatcatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaac
agctctggtgctgaaaacaaaggtagctactttgaaaatgaacatagtcaagattatgaa
caaccagcctttttaatgcagagacacctacaagagcatctctacttctctatgtaa