Result of FASTA (omim) for pF1KA1739
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1739, 833 aa
  1>>>pF1KA1739 833 - 833 aa - 833 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.0875+/-0.000374; mu= 3.5984+/- 0.023
 mean_var=185.9941+/-37.228, 0's: 0 Z-trim(120.2): 195  B-trim: 687 in 1/54
 Lambda= 0.094043
 statistics sampled from 34965 (35162) to 34965 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.736), E-opt: 0.2 (0.412), width:  16
 Scan time: 13.360

The best scores are:                                      opt bits E(85289)
XP_011509685 (OMIM: 604462) PREDICTED: semaphorin- ( 833) 5771 795.7       0
XP_011509682 (OMIM: 604462) PREDICTED: semaphorin- ( 833) 5771 795.7       0
XP_011509683 (OMIM: 604462) PREDICTED: semaphorin- ( 833) 5771 795.7       0
NP_060259 (OMIM: 604462) semaphorin-4C precursor [ ( 833) 5771 795.7       0
XP_011509680 (OMIM: 604462) PREDICTED: semaphorin- ( 833) 5771 795.7       0
XP_011509681 (OMIM: 604462) PREDICTED: semaphorin- ( 833) 5771 795.7       0
XP_011509684 (OMIM: 604462) PREDICTED: semaphorin- ( 833) 5771 795.7       0
XP_016859882 (OMIM: 604462) PREDICTED: semaphorin- ( 875) 5771 795.7       0
XP_016859883 (OMIM: 604462) PREDICTED: semaphorin- ( 692) 4804 664.5 4.6e-190
XP_006712669 (OMIM: 604462) PREDICTED: semaphorin- ( 495) 3349 467.0 9.2e-131
XP_016869682 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_016869684 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516431 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516430 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_016869686 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_016869687 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_005251711 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516433 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
NP_006369 (OMIM: 601866) semaphorin-4D isoform 1 p ( 862) 1700 243.4 3.3e-63
XP_016869683 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516432 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516436 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516425 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516426 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516429 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516435 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_011516427 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
XP_016869685 (OMIM: 601866) PREDICTED: semaphorin- ( 862) 1700 243.4 3.3e-63
NP_001135759 (OMIM: 601866) semaphorin-4D isoform  ( 738) 1636 234.7 1.2e-60
NP_001310961 (OMIM: 617029) semaphorin-4B isoform  ( 602) 1622 232.7 3.7e-60
NP_064595 (OMIM: 617029) semaphorin-4B isoform 1 p ( 837) 1624 233.1 4.1e-60
NP_945119 (OMIM: 617029) semaphorin-4B isoform 1 p ( 837) 1624 233.1 4.1e-60
NP_001310960 (OMIM: 617029) semaphorin-4B isoform  ( 890) 1624 233.1 4.3e-60
XP_016869688 (OMIM: 601866) PREDICTED: semaphorin- ( 534) 1418 205.0 7.2e-52
NP_001310963 (OMIM: 617029) semaphorin-4B isoform  ( 847) 1410 204.0 2.3e-51
XP_011530777 (OMIM: 603706) PREDICTED: semaphorin- ( 624) 1395 201.9 7.2e-51
NP_004254 (OMIM: 603706) semaphorin-4F isoform 1 p ( 770) 1395 202.0 8.6e-51
XP_011530779 (OMIM: 603706) PREDICTED: semaphorin- ( 597) 1354 196.4 3.3e-49
XP_011530778 (OMIM: 603706) PREDICTED: semaphorin- ( 600) 1351 196.0 4.4e-49
NP_001310962 (OMIM: 617029) semaphorin-4B isoform  ( 681) 1340 194.5 1.4e-48
NP_001310959 (OMIM: 617029) semaphorin-4B isoform  ( 681) 1340 194.5 1.4e-48
XP_016858661 (OMIM: 603706) PREDICTED: semaphorin- ( 668) 1297 188.7 7.7e-47
XP_005265439 (OMIM: 601124) PREDICTED: semaphorin- ( 754) 1165 170.8 2.1e-41
NP_001305729 (OMIM: 601124) semaphorin-3F isoform  ( 754) 1165 170.8 2.1e-41
NP_001305727 (OMIM: 601124) semaphorin-3F isoform  ( 686) 1158 169.8 3.7e-41
XP_016858662 (OMIM: 603706) PREDICTED: semaphorin- ( 635) 1139 167.2 2.1e-40
NP_001258591 (OMIM: 603706) semaphorin-4F isoform  ( 737) 1139 167.2 2.4e-40
NP_004627 (OMIM: 601281) semaphorin-3B isoform 1 p ( 749) 1132 166.3 4.6e-40
NP_001276989 (OMIM: 601281) semaphorin-3B isoform  ( 749) 1132 166.3 4.6e-40
XP_005250168 (OMIM: 603961,614897) PREDICTED: sema ( 771) 1099 161.8 1.1e-38


>>XP_011509685 (OMIM: 604462) PREDICTED: semaphorin-4C i  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>XP_011509682 (OMIM: 604462) PREDICTED: semaphorin-4C i  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>XP_011509683 (OMIM: 604462) PREDICTED: semaphorin-4C i  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>NP_060259 (OMIM: 604462) semaphorin-4C precursor [Homo  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>XP_011509680 (OMIM: 604462) PREDICTED: semaphorin-4C i  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>XP_011509681 (OMIM: 604462) PREDICTED: semaphorin-4C i  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>XP_011509684 (OMIM: 604462) PREDICTED: semaphorin-4C i  (833 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4241.0  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFGGRDLPAEQP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLELPKEPTSPPF
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
              730       740       750       760       770       780

              790       800       810       820       830   
pF1KA1 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEESSV
              790       800       810       820       830   

>>XP_016859882 (OMIM: 604462) PREDICTED: semaphorin-4C i  (875 aa)
 initn: 5771 init1: 5771 opt: 5771  Z-score: 4240.7  bits: 795.7 E(85289):    0
Smith-Waterman score: 5771; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:43-875)

                                             10        20        30
pF1KA1                               MAPHWAVWLLAARLWGLGIGAEVWWNLVPR
                                     ::::::::::::::::::::::::::::::
XP_016 SGLLSLAVISDHVFSLSRTAGLKLRAGACAMAPHWAVWLLAARLWGLGIGAEVWWNLVPR
             20        30        40        50        60        70  

               40        50        60        70        80        90
pF1KA1 KTVSSGELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTVSSGELATVVRRFSQTGIQDFLTLTLTEPTGLLYVGAREALFAFSMEALELQGAISWE
             80        90       100       110       120       130  

              100       110       120       130       140       150
pF1KA1 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APVEKKTECIQKGKNNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHG
            140       150       160       170       180       190  

              160       170       180       190       200       210
pF1KA1 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFEDGKGKCPYDPAKGHAGLLVDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWL
            200       210       220       230       240       250  

              220       230       240       250       260       270
pF1KA1 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NEPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGART
            260       270       280       290       300       310  

              280       290       300       310       320       330
pF1KA1 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQRKWTTFLKARLACSAPNWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC
            320       330       340       350       360       370  

              340       350       360       370       380       390
pF1KA1 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EYQLEEIQRVFEGPYKEYHEEAQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI
            380       390       400       410       420       430  

              400       410       420       430       440       450
pF1KA1 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLK
            440       450       460       470       480       490  

              460       470       480       490       500       510
pF1KA1 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVSLGPWVHLIEELQLFDQEPMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCV
            500       510       520       530       540       550  

              520       530       540       550       560       570
pF1KA1 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LARDPYCAWSVNTSRCVAVGGHSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAG
            560       570       580       590       600       610  

              580       590       600       610       620       630
pF1KA1 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDLVLPCHLSSNLAHARWTFGGRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSE
            620       630       640       650       660       670  

              640       650       660       670       680       690
pF1KA1 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQGARLAAEGYLVAVVAGPSVTLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRL
            680       690       700       710       720       730  

              700       710       720       730       740       750
pF1KA1 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REELEKGAKATERTLVYPLELPKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHA
            740       750       760       770       780       790  

              760       770       780       790       800       810
pF1KA1 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELA
            800       810       820       830       840       850  

              820       830   
pF1KA1 DELRRKLQQRQPLPDSNPEESSV
       :::::::::::::::::::::::
XP_016 DELRRKLQQRQPLPDSNPEESSV
            860       870     

>>XP_016859883 (OMIM: 604462) PREDICTED: semaphorin-4C i  (692 aa)
 initn: 4804 init1: 4804 opt: 4804  Z-score: 3533.2  bits: 664.5 E(85289): 4.6e-190
Smith-Waterman score: 4804; 100.0% identity (100.0% similar) in 692 aa overlap (142-833:1-692)

             120       130       140       150       160       170 
pF1KA1 NFIRFLQPYNASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLL
                                     ::::::::::::::::::::::::::::::
XP_016                               MLTFTLEHGEFEDGKGKCPYDPAKGHAGLL
                                             10        20        30

             180       190       200       210       220       230 
pF1KA1 VDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDGELYSATLNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGD
               40        50        60        70        80        90

             240       250       260       270       280       290 
pF1KA1 DDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQ
              100       110       120       130       140       150

             300       310       320       330       340       350 
pF1KA1 LYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEE
              160       170       180       190       200       210

             360       370       380       390       400       410 
pF1KA1 AQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQKWDRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRP
              220       230       240       250       260       270

             420       430       440       450       460       470 
pF1KA1 LLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLVKKGTNFTHLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEP
              280       290       300       310       320       330

             480       490       500       510       520       530 
pF1KA1 MRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGG
              340       350       360       370       380       390

             540       550       560       570       580       590 
pF1KA1 HSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSGSLLIQHVMTSDTSGICNLRGSKKVRPTPKNITVVAGTDLVLPCHLSSNLAHARWTFG
              400       410       420       430       440       450

             600       610       620       630       640       650 
pF1KA1 GRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRDLPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSV
              460       470       480       490       500       510

             660       670       680       690       700       710 
pF1KA1 TLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLEARAPLENLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKATERTLVYPLEL
              520       530       540       550       560       570

             720       730       740       750       760       770 
pF1KA1 PKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKEPTSPPFRPCPEPDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLP
              580       590       600       610       620       630

             780       790       800       810       820       830 
pF1KA1 SPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPTRLHLGGGRNSNANGYVRLQLGGEDRGGLGHPLPELADELRRKLQQRQPLPDSNPEES
              640       650       660       670       680       690

         
pF1KA1 SV
       ::
XP_016 SV
         

>>XP_006712669 (OMIM: 604462) PREDICTED: semaphorin-4C i  (495 aa)
 initn: 3349 init1: 3349 opt: 3349  Z-score: 2468.6  bits: 467.0 E(85289): 9.2e-131
Smith-Waterman score: 3349; 99.8% identity (99.8% similar) in 483 aa overlap (1-483:1-483)

               10        20        30        40        50        60
pF1KA1 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAPHWAVWLLAARLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PTGLLYVGAREALFAFSMEALELQGAISWEAPVEKKTECIQKGKNNQTECFNFIRFLQPY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NASHLYVCGTYAFQPKCTYVNMLTFTLEHGEFEDGKGKCPYDPAKGHAGLLVDGELYSAT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LNNFLGTEPIILRNMGPHHSMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ERAVESDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLKARLACSAPNWQLYFNQLQAM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HTLQDTSWHNTTFFGVFQAQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKWDRYTD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVPSPRPGSCINNWHRRHGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 THLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQLFDQEPMRSLVLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 KKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQH
       : :                                                         
XP_006 KTLQAVLWFWLWPLP                                             
              490                                                  




833 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 21:56:33 2016 done: Wed Nov  2 21:56:35 2016
 Total Scan time: 13.360 Total Display time:  0.240

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com