GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:33:10

Sequence gi568815596r:179845132_180088649 : 243518 bp : 37.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4060   4185  126  0  0   63   38   123 0.383   2.10
 1.02 PlyA +   4200   4205    6                               1.05

 2.07 PlyA -   5114   5109    6                               1.05
 2.06 Term -   5496   5228  269  1  2   81   48   117 0.328   1.67
 2.05 Intr -   7474   7339  136  1  1   78   78    71 0.377   4.32
 2.04 Intr -  16101  16033   69  0  0   26   49   149 0.002   3.26
 2.03 Intr -  51630  51526  105  0  0   96   42    72 0.285   2.89
 2.02 Intr -  55505  55413   93  2  0   31  100    58 0.053   0.54
 2.01 Init -  57113  56967  147  2  0   83   25    92 0.075   2.54
 2.00 Prom -  57315  57276   40                              -3.65

 3.00 Prom +  61107  61146   40                              -3.75
 3.01 Init +  84464  84514   51  1  0   68   90    31 0.428   2.23
 3.02 Term +  84891  85016  126  2  0   97   44   123 0.879   6.10
 3.03 PlyA +  85765  85770    6                               1.05

 4.00 Prom +  91263  91302   40                              -2.75
 4.01 Init +  93452  93522   71  1  2   96   91    76 0.787   9.27
 4.02 Term +  95978  96008   31  2  1   67   38    51 0.184  -5.65
 4.03 PlyA +  96483  96488    6                               1.05

 5.14 PlyA -  97258  97253    6                               1.05
 5.13 Term - 100584  99998  587  1  2   63   31   326 0.999  18.09
 5.12 Intr - 105601 105381  221  0  2   -2   72   231 0.774   9.52
 5.11 Intr - 105795 105694  102  2  0  109   83    63 0.771   6.27
 5.10 Intr - 107467 107340  128  1  2   98   80    68 0.994   5.56
 5.09 Intr - 109226 109074  153  2  0   59   84    75 0.719   3.55
 5.08 Intr - 113951 113891   61  1  1   59   45    51 0.087  -4.28
 5.07 Intr - 119497 119416   82  2  1   93  116    49 0.981   5.98
 5.06 Intr - 120851 120747  105  0  0   90   92   253 0.999  25.17
 5.05 Intr - 125432 125370   63  0  0   62   95    69 0.872   2.77
 5.04 Intr - 125725 125519  207  2  0   79   83   296 0.994  26.33
 5.03 Intr - 125945 125810  136  2  1   46  115    57 0.846   3.42
 5.02 Intr - 128671 128503  169  0  1   79   71   137 0.854  10.13
 5.01 Init - 133171 133059  113  1  2   47  115    31 0.936   1.43
 5.00 Prom - 136008 135969   40                              -4.75

 6.04 PlyA - 136083 136078    6                               1.05
 6.03 Term - 136866 136587  280  2  1   42   44   361 0.984  21.03
 6.02 Intr - 141674 141564  111  1  0   49   61   108 0.786   2.78
 6.01 Init - 146082 145751  332  0  2   57   14   142 0.134   0.58
 6.00 Prom - 148126 148087   40                              -7.55

 7.00 Prom + 148700 148739   40                              -7.05
 7.01 Init + 161581 161683  103  0  1   74   82    83 0.612   6.75
 7.02 Intr + 164948 165129  182  0  2   54  100   117 0.618   8.17
 7.03 Term + 165986 166048   63  1  0  104   44    74 0.928   1.51
 7.04 PlyA + 166743 166748    6                               1.05

 8.06 PlyA - 167011 167006    6                               1.05
 8.05 Term - 168845 168774   72  2  0  131   43    23 0.559  -0.97
 8.04 Intr - 173829 173746   84  0  0   68   98    66 0.829   4.70
 8.03 Intr - 175716 175617  100  2  1   65   98    24 0.044   0.29
 8.02 Intr - 215579 215418  162  1  0   83   37    81 0.054   0.67
 8.01 Intr - 225977 225902   76  0  1  102   82    76 0.534   6.05

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  17706  17839  134  2  2   72  111   109 0.844  11.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_1|41_aa
HHSGFVVIQENTMQTKRTKGLQKTFEGKRGYELQNLRLTEP

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_1|126_bp
catcattctggcttcgtggttattcaggagaataccatgcaaacgaaaaggacaaaagga
cttcagaaaacctttgaagggaaacgaggttatgaattacagaatttaagactgactgag
ccttaa

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_2|272_aa
MDEAGSHNSQQTNTGMENQTPYVLTYKWELKNENTWTQGRKHHTLGPVGVHQEVLQKKAL
IQGITASCGVLPLKVFQWDKHKQLDEIVGSDSGLIFFCGDEIVSWVVICLSIKKNQIAGE
RLREAPVQPWRDRSNHRSVLVHDEFPCQREPLDACRSIYVSSLMVYGFQGPNLTLQNLKE
VVGARGQTKHVPPHPVPNKKALNRHGSCLQTLEGMIRGQGSRFIFPKFQQAQPDSVGGII
GRQISTQYEKELSDDSLSSNGMAALKFHAPSS

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_2|819_bp
atggatgaagctggaagccataattctcagcaaactaacacaggaatggaaaaccaaaca
ccatatgttctcacttacaagtgggagttgaagaatgagaacacatggacacaaggaagg
aaacatcacacactggggcctgtcggggttcatcaggaggtattgcagaagaaggcattg
atacaagggataacagcttcatgtggggtattgcccctgaaagtcttccagtgggacaag
cataaacagttggatgaaatagttggatcagattcaggtttaatttttttttgtggggac
gagattgtttcatgggtggtgatatgtttatccatcaagaagaaccagatcgcgggagaa
cgtctgcgcgaagccccggtgcagccctggcgggaccgcagcaaccaccggagcgtttta
gtccacgatgagtttccatgccaacgtgaaccactggacgcctgccgcagtatctatgtg
agctcactcatggtatatggattccagggcccaaacctaaccctacaaaatctaaaagag
gtggtaggagcaagaggacagacaaagcatgtgcctcctcatccggttccgaataagaag
gctttgaacagacatggtagttgcctgcaaacacttgaagggatgatacgtggacaagga
agtagattcatttttccaaagttccagcaggcacaaccagattcagtgggtgggatcata
gggaggcaaatttcaactcaatatgagaaagaactttcagatgattcactgtccagtaat
ggtatggctgccttgaagtttcatgctccctctagctga

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_3|58_aa
MISFDAMSCIWVTLMQEAQHHMEAAKAWGFHPLKPQPELYIGPFQPWLKWLEHRAPGP

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_3|177_bp
atgatctcctttgatgccatgtcttgcatctgggtcacactgatgcaagaggctcaacat
cacatggaagctgccaaggcttggggcttccaccctctgaagccacagcctgagctctac
attggcccctttcagccatggctgaagtggctggaacacagggcaccaggtccctag

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_4|33_aa
MDAASGHYPKQITGTETKYHISRSKYTDMHTSV

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_4|102_bp
atggatgcagccagtggccattatcctaagcagataacaggaacagaaaccaaataccac
atttctcggtctaaatacacggacatgcacacctctgtgtga

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_5|708_aa
MSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYA
ALVAIINSKFPQIGELILKRLILNFRKGYRRNDKAHEVLCLEMLTLLLERPTDDSVEVAI
GFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIIL
EGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDTDSN
TDQDAGSSEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAH
KLLKMEFPESQTRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSL
PWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDN
PRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDVEQNKSSPSSSSSASSSSES
DSSDSDSDSSDSSSESSSEESDSSSISSHSSASANDVRKKGHGKTRSKEVDKLIRNQQTN
DRKQKERRQEHGHQETRTERERRSEKHRDQNSSGSNWRDPITKYTSDKDVPSERNNYSRV
ANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKDSENFRRKDRSKSKEMNRK
HSGSRSDEDRYQNGAERRWEKSSRYSEQSRESKKNQDRRREKSPAKQK

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_5|2127_bp
atgagttgggaggccctgaagaagtcaattaatggccttatcaacaaagtcaacatttcc
aacataagtattattattcaagagcttcttcaagaaaatatagttagaggaagaggactg
ctgtccaggtctgttttgcaagcacagagtgcttctccaatcttcacccatgtttatgca
gcattagtggcaattatcaactcaaaatttccacaaattggagaattaatcctcaaaagg
ttaattcttaattttcgaaaaggctatcgaagaaatgacaaggcacacgaagtattatgc
ttagagatgctcactttgctcctggaaagaccaacagatgatagcgttgaagtagctatt
ggttttcttaaggaatgtggcctcaaattaacacaagtgtcaccaagaggaatcaatgct
atatttgaacgccttcgaaacattctgcatgagtctgaaattgacaaaagagttcaatat
atgattgaagtgatgtttgctgtacggaaagatggattcaaggaccaccccattatccta
gaaggtcttgatttggtggaagaagatgatcaattcactcatatgctccctctggaggat
gactataatccagaagatgttcttaatgttttcaagatggatcctaattttatggagaat
gaagagaagtacaaagctattaagaaagaaattcttgatgagggagatactgactcgaac
acagaccaggatgctgggagtagtgaagaggacgaggaagaagaagaggaagagggagaa
gaagatgaagaaggacaaaaagtaactattcatgacaaaacagaaattaacctggtctca
tttcgtcgtacaatttatcttgctattcagtcaagtttagattttgaagaatgtgctcac
aaattgctgaaaatggagtttcctgaaagccaaacacgattttgcatgctaaagaaagag
tacatggaatcctttgaaggtatattcaaagaacagtatgataccatccatcgcttggaa
acaaacaagttgcgaaatgttgctaagatgtttgctcaccttttatacactgattcactt
ccatggagtgttcttgaatgtataaaactgagtgaagaaaccactacatcatccagtaga
atttttgtcaaaatatttttccaggaactgtgtgaatacatgggtcttcctaaacttaat
gcaagattaaaggatgaaactctgcagccattctttgaaggattattaccccgagataat
ccaagaaacactcggtttgccatcaacttctttacttctataggtcttggaggtttaacg
gatgaactgcgggagcatctcaaaaatacaccaaaggtcattgtggcgcagaaaccagat
gttgagcaaaataaatcctccccatcctcttcctcttcagcgtcctcctcttcagagtct
gactcatccgactctgattctgacagcagtgatagcagttcagagtcttccagtgaagag
agcgactcttcatccatcagtagtcatagctctgcctcagctaatgatgtaagaaagaag
ggacatgggaagaccagaagtaaagaggtagataaattgatcagaaaccagcaaacaaat
gataggaaacaaaaagaaagaagacaagaacacgggcaccaggaaacaaggactgagaga
gaaagaaggtcagaaaaacacagagatcaaaattcaagtggttcaaattggagagatcct
ataacaaagtacacatcagacaaagatgttccttctgaacgaaataactacagtagagtt
gcgaatgacagagaccaagaaatgcatatagatttggaaaataagcatggtgatcccaaa
aagaagagaggagagagaagaaattctttttctgaaaatgagaagcatacacaccgaatt
aaagacagtgaaaatttcagaagaaaagatagatcaaagtcaaaggaaatgaatagaaag
cactcaggctcaagaagtgatgaagatagatatcaaaatggtgccgagagacgatgggaa
aaatctagcagatactctgaacaatccagagaatcaaagaaaaatcaggaccggcgaaga
gaaaagtctccagcaaaacaaaaataa

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_6|240_aa
MKATGLRLLVPLVSSYCSPYIVGDYELLHDVTIFVLLHEQFRKILKGNSDCIVFSTTALT
YNLNSVIKEIGKFRFLIFDSYLKVILNLVKSYSSTKAKFKSPFSHFHPLALYEEQERSPR
DRDYFDYSRSDYEHSRRGRSYDSSMESRNRDREKRRERERDTDRKRSRKSPSPGRRNPET
SVTQSSSAQDEPATKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKNRHVYINQYTKP

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_6|723_bp
atgaaagccactggactcaggcttcttgttccccttgtctcctcgtactgctctccctac
attgttggagactatgagttactacatgatgtcaccatatttgttttgcttcatgaacaa
tttcgaaaaattttaaaaggtaattctgactgtatagtattttcaactactgcactgact
tacaatctaaactctgtgataaaagaaatagggaaattcaggttcttaatatttgattca
tacctgaaagtgattcttaacttggtgaaatcctattcatctaccaaagccaaattcaag
tccccgttttcccactttcatccgttagcactatatgaagaacaagaacgatccccccgg
gatagagattactttgattacagcagatcagactatgagcattcaagaagaggacgttct
tatgatagtagcatggagtcacgaaacagggaccgagaaaaacgcagagaaagagaaaga
gatacggatcggaaaaggtctcggaaatccccatctcctgggaggagaaacccagaaaca
tcagtaactcagagttcctctgctcaggatgaacctgctacaaagaaaaagaaagatgag
ctggatcctcttcttactcgcactggtggagcatatattccccctgcaaagctcaggatg
atgcaggaacagattacagataaaaacaggcatgtttatatcaatcagtatacaaagcca
tga

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_7|115_aa
MDSRGSKYKTQCTRNNTAPALVQDFRQLQELHKEGTLHPERQYLILAEYCLLADTLTESS
AGHSSALLGHQLLGMQHVIHPVEPMVTGLYHLCYELIDQDHTSAPYGHQYELKEY

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_7|348_bp
atggactccagaggctctaagtataaaacgcagtgcacaagaaacaacacagcaccagcg
ttggtgcaggatttcagacagctccaggaacttcacaaggaagggaccctgcatcctgag
agacagtacctcattcttgcagaatattgtcttctagctgatactttaactgaatcttca
gcaggtcattccagtgctctattaggccaccagcttctgggcatgcagcatgtgatacat
ccagtggaacccatggtcacaggcttgtaccacctttgctatgaacttattgatcaagac
cacacctctgctccatatggtcaccaatatgagctgaaggagtattga

>gi568815596r:179845132_180088649|GENSCAN_predicted_peptide_8|164_aa
XHWNSNLVAQELDVRTGPKGSFEGQRFNCLMAHAGGEPGPWLGSMGSPPPQSPQFYGRTH
LEVIHTVRSSPGKSIPSISTGILLLMSQLVYTMCVHPVALFVKSYGDVMPHFTGDVTTSV
TVSVQPDIIPSILGDVTPNFTVLLSNTLLTPLFLSQYLLLRGSN

>gi568815596r:179845132_180088649|GENSCAN_predicted_CDS_8|495_bp
ngacactggaactccaatcttgtagctcaggaacttgatgtgaggactggtcctaagggc
agttttgaggggcaaagattcaactgtctcatggctcatgctgggggagaacccggtcca
tggttgggatccatgggttcccccccgccccagtctccccaattctatggtcgtacacat
cttgaggtcatccacacggttcgttcatctcctggcaaaagcataccctcaatctccacg
gggatattactcctaatgtcacagttggtgtacaccatgtgtgttcaccctgtggcatta
tttgtaaaatcctacggggatgttatgcctcatttcacaggggatgttactactagcgtc
actgtgagtgtacaacctgatattattcctagtatcttaggggatgttactcctaatttc
acagtattactttctaatacacttttgacacccctgtttctatctcagtatctgcttctt
agaggatccaattga