GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:07:16

Sequence gi568815580r:32574660_32870591 : 295932 bp : 38.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    549    544    6                               1.05
 1.06 Term -    862    701  162  1  0   63   33   131 0.057   2.05
 1.05 Intr -   6371   6026  346  1  1   92   59    95 0.002   1.47
 1.04 Intr -  24084  23997   88  1  1  118   13    85 0.006   2.11
 1.03 Intr -  32352  32247  106  0  1   40   32   119 0.015   0.37
 1.02 Intr -  45314  45270   45  2  0   64   86    89 0.076   3.99
 1.01 Init -  52955  52761  195  2  0  101   52    99 0.096   6.58
 1.00 Prom -  72408  72369   40                              -3.15

 2.08 PlyA -  72691  72686    6                               1.05
 2.07 Term - 100138  99998  141  1  0  113   41   113 0.968   6.05
 2.06 Intr - 102671 102514  158  0  2   79   80   130 0.997  10.11
 2.05 Intr - 105668 105510  159  0  0  101   13   151 0.980   7.94
 2.04 Intr - 112574 112496   79  2  1   70  115    34 0.115   2.51
 2.03 Intr - 118500 118323  178  2  1   43    7   172 0.075   3.60
 2.02 Intr - 120893 120804   90  1  0   72   48   106 0.141   3.19
 2.01 Init - 134652 134534  119  0  2   68  103    57 0.207   4.92
 2.00 Prom - 141554 141515   40                              -3.35

 3.00 Prom + 143343 143382   40                              -6.85
 3.01 Init + 145654 145815  162  0  0   48   86   101 0.189   5.68
 3.02 Term + 168193 168396  204  0  0  113   53   171 0.505  12.49
 3.03 PlyA + 168555 168560    6                               1.05

 4.03 PlyA - 171165 171160    6                               1.05
 4.02 Term - 172898 172722  177  2  0   60   37   144 0.838   3.20
 4.01 Init - 176013 175942   72  0  0   64  100    57 0.960   5.62
 4.00 Prom - 189622 189583   40                              -6.45

 5.04 PlyA - 191498 191493    6                               1.05
 5.03 Term - 193080 192960  121  2  1   92   50    74 0.772   0.97
 5.02 Intr - 195975 194986  990  2  0  101   91  1601 0.794 150.73
 5.01 Init - 196363 196257  107  1  2   92   59   146 0.578   9.84
 5.00 Prom - 209722 209683   40                              -6.65

 6.04 PlyA - 211429 211424    6                               1.05
 6.03 Term - 217545 217480   66  0  0  112   39    89 0.737   3.36
 6.02 Intr - 219896 219727  170  0  2   33   94   169 0.942  10.74
 6.01 Init - 220306 220108  199  1  1   44   68   265 0.466  17.22
 6.00 Prom - 224388 224349   40                              -5.95

 7.00 Prom + 224527 224566   40                              -6.75
 7.01 Init + 227438 227530   93  1  0   40   37    92 0.233  -0.27
 7.02 Intr + 228379 228470   92  0  2  120   41    88 0.130   5.17
 7.03 Intr + 250390 250472   83  1  2   61  119    40 0.523   2.76
 7.04 Intr + 252469 252559   91  2  1   47   91    38 0.333  -1.87
 7.05 Intr + 257082 257263  182  0  2   52   -5   180 0.076   3.69
 7.06 Intr + 260197 260415  219  2  0   63   44   173 0.055   7.75
 7.07 Intr + 268144 268234   91  2  1   67   72    52 0.038  -0.37
 7.08 Term + 269062 269164  103  1  1   50   42   129 0.576   1.27
 7.09 PlyA + 270710 270715    6                               1.05

 8.02 PlyA - 270948 270943    6                               1.05
 8.01 Sngl - 284754 283390 1365  0  0   70   41   582 0.994  47.57
 8.00 Prom - 285705 285666   40                              -6.15

 9.02 PlyA - 285874 285869    6                               1.05
 9.01 Sngl - 286758 286102  657  0  0   65   43   432 0.776  32.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  34730  34911  182  1  2   37   73   192 0.804  11.30
S.002 Sngl - 182909 182694  216  2  0   54   54   161 0.814   4.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_1|313_aa
MDFNVTIKDIGRSGLGVEKEKWEQVVKTGKEGWEVLLPRVTVEQKKKWNWKWCYCKNNGK
HLAHLRKSEDDQGHAKSYRKRGGEEQQLIPGIYYMTAVHQRYLDHRTATSSLKISGMGLP
ENQTAAIVIALVGLATKQGYWAPGWHGLPRVGPETSRLMPSPLSSLGMNRTPLPMGSNQS
LHVTLIDLTWVTSPFLNQQGDELLCQILVTYPPLELGVWLFPSEPHEVKMRSGQFPQGKR
DGVISNQEESSRPRYNINSCSCCVKMQSTLVAVGDSLIVTKLVDPPRSTNCLKARAVGWQ
VTPKTVGLVKKGH

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_1|942_bp
atggattttaatgttaccattaaagacattggaaggtctggtcttggtgtggagaaagaa
aagtgggaacaggtggtaaaaacaggaaaagaaggatgggaggtcctcctcccacgggta
acagtggaacaaaagaagaagtggaattggaagtggtgctattgcaagaacaatggaaag
cacctagcacatctgagaaaatctgaagatgatcagggacatgccaagtcatatcggaag
agaggtggagaagagcagcagctgataccagggatatactacatgacagcagttcatcaa
agatatttggatcatcggacagcaactagctctctcaaaatatcagggatggggcttcct
gagaaccagactgcagcaattgttattgcccttgtgggtctagccaccaagcaaggctac
tgggccccaggctggcacggtctccccagggtgggaccggaaacctccaggctcatgccc
tcccctttgagtagccttggcatgaatagaactcctctgcccatgggctccaatcagagt
ctccatgtgactctgattgacctaacttgggtcacaagtccattcctgaaccagcagggg
gatgaactactctgccagattttggtcacatacccacctttggagctaggggtgtggtta
tttccatcagaaccacatgaagtaaaaatgaggagtgggcagttcccacaagggaaaagg
gatggtgtgatctctaatcaggaagagagttcaagacccagatataacattaatagctgc
tcctgttgtgtcaaaatgcaaagcacactggtagctgttggtgactcactgatagtcacc
aagcttgtggaccctccaaggagcacaaactgcttgaaagccagggctgtaggttggcaa
gtcacacctaagactgtgggactagtaaagaaaggccattaa

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_2|307_aa
MRIFKGKTCQRQREEQMQRPDTGTCLECCRSKAAGMVGAPYAIQQCPPLRCGGGKLLVRV
GWRGPVESEWWGMREGNEVACSAGGAAVTMSSQHSAAREWVHRSGKGIWANEQEHPPQSR
EWFLYSIHLENTVQILSADMILDLIAGFNFHPCRKGGVHNGEYVPWLYCYDPVMDVWARK
QDMNTKRAIHTLAVMNDRLYAIGGNHLKGFSHLDVMLVECYDPKGDQWNILQTPILEGRS
GPGCAVLDDSIYLVGGYSWSMGAYKSSTICYCPEKGTWTELEGDVAEPLAGPACVTVILP
SCVPYNK

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_2|924_bp
atgagaatattcaaaggaaaaacatgtcagaggcagagagaagagcagatgcaaaggcct
gacacaggaacatgtttggagtgttgcagaagcaaagcagccggtatggttggagcacct
tatgccatacaacagtgcccaccactgcgttgtggaggtggaaaacttcttgttcgtgtt
gggtggagaggaccagtggaatccgaatggtgggggatgagggaaggcaatgaggtggcc
tgttcagcaggaggagccgccgtgaccatgagcagccagcattcagcagccagggaatgg
gtgcaccggtctggtaaaggaatctgggctaatgaacaagagcacccaccacaatcccgt
gaatggtttctatactccatccatctggaaaacacagtacaaattttgtcagccgatatg
atcctcgatttaatagctggattcaacttccacccatgcaggaaagggggtgtacacaat
ggagaatatgtcccatggctatattgctatgacccagtaatggatgtctgggctcgaaaa
caagatatgaacacaaaacgtgcaattcacactttggctgtaatgaatgatcgcttgtat
gcaattggaggaaatcatttgaaaggtttctcccaccttgatgtaatgcttgtggaatgc
tatgacccaaaaggtgaccagtggaatatactccaaactcccattttggagggtcgaagt
ggccctggctgtgcagtgcttgatgacagcatttaccttgtgggaggctacagctggagt
atgggggcctacaagtcatctacaatatgctattgtccagagaaaggaacctggacagaa
ctcgaaggagatgtagcagaaccgttggcaggccctgcctgtgtgacagttattctgccc
tcttgtgtaccatacaacaaataa

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_3|121_aa
METEDHSDSAYGQLRKGLEEKEGSGMTLKISGWRDEDAISPNREQQRQNGFKGKGATTER
SDYPPIKSWQFAAINRDCDSQSAWQFLRKACNVSYAVKAVRCTLASTLDLMDVQSSGTVM
D

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_3|366_bp
atggaaacagaagatcatagtgacagcgcttatggtcagttgaggaaggggttggaggag
aaagaggggtcagggatgacacttaagatttcaggttggagagatgaagatgctatttct
cccaacagagaacaacaaagacagaatgggttcaaaggcaagggggcaaccactgaaagg
agtgactacccacccatcaagagctggcaattcgctgctattaaccgtgactgtgattcc
cagtccgcctggcagttcctgagaaaggcctgcaatgtctcatatgcagtaaaagctgta
agatgcaccctggccagcacactcgacctgatggatgtacaatcctcaggaacagtaatg
gattga

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_4|82_aa
MKFGDLNIVRFGDYPNRGSWQRREISGSIRFSYERKPYVNCTCEGSSLCAPYENLIPDDV
SLSPITPRWDCLVAGKQAQGSH

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_4|249_bp
atgaaattcggtgacttgaatattgtaagatttggtgactaccctaacagaggcagctgg
cagcgaagagaaattagtggcagtatcagattctcatatgagcgcaaaccctacgtgaat
tgcacatgtgagggaagtagcttgtgtgctccttatgagaatctaatacctgatgatgtg
tcactgtctcccatcacccccagatgggactgtctagttgcaggaaaacaagctcagggc
tcccactga

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_5|405_aa
MDTSPRGASASAATLPSLLPLLLLPTAELRWLVLGKLEEGLKPGAPSQLAMSRSGDRTST
FDPSHSDNLLHGLNLLWRKQLFCDVTLTAQGQQFHCHKAVLASCSQYFRSLFSSHPPLGG
GVGGQDGLGAPKDQQQPPQQQPSQQQQPPPQEEPGTPSSSPDDKLLTSPRAINNLVLQGC
SSIGLRLVLEYLYTANVTLSLDTVEEVLSVSKILHIPQVTKLCVQFLNDQISVQNYKQVC
KIAALHGLEETKKLANKYLVEDVLLLNFEEMRALLDSLPPPVESELALFQMSVLWLEHDR
ETRMQYAPDLMKRLRFALIPAPELVERVQSVDFMRTDPVCQKLLLDAMNYHLMPFRQHCR
QSLASRYVLRFNVRRVDFQNAKSISHFSQDSAHQLVPAGSVLVDG

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_5|1218_bp
atggacacgagcccacgaggtgcctcggcctcagccgccactttgccgtcgctgctgcca
ctgctgttgctgccaacagccgagctgaggtggttggttttaggaaagttggaggagggt
ttaaagccaggtgcaccgagtcagctcgccatgtccagatccggggacaggacctccacc
ttcgaccccagccacagcgacaacctgctgcacggcctcaacctgctgtggaggaagcag
ctgttttgcgacgtgaccctgacggcccagggccagcagttccattgccacaaggccgtg
ctggcctcctgctcgcagtacttccgatcgctcttctccagccacccccctctcggggga
ggggtcggcggccaggacggcctgggggcccccaaggaccagcagcagccgccgcagcag
cagccgtcacagcagcagcagccgccgccgcaggaggagcccgggactccttcttcctcc
cccgacgacaagctgctgaccagcccccgggccatcaacaacctggtgctgcagggctgc
tcgtccatcgggctgcgcctggtgctcgagtacctctacacggccaacgtgaccctgtcc
ctggacacggtggaggaggtgctgtcggtcagcaagatcctgcacatcccccaggtcacc
aagctctgcgtgcagttcctcaacgaccagatctcggtgcagaactacaagcaggtgtgc
aagatcgccgcgctgcacggcctggaggagaccaagaagctggccaacaagtacctggtg
gaggatgtgctgctgctcaacttcgaggagatgcgcgccctgctggactcgctgccgccc
cccgtggagtcggagctggcgctcttccagatgtccgtgctgtggctggagcacgaccgc
gagacccgcatgcagtatgcgcctgacctcatgaagcgcctccgcttcgccctcatcccg
gccccggagctggtggagcgggtccagtcagtggatttcatgcgaaccgacccggtctgc
cagaagctgctgctggacgccatgaactaccacctgatgcccttcaggcagcactgcagg
cagagcctggccagcaggtatgtcctaaggttcaatgttagaagagttgactttcaaaat
gcaaaatccatttcccactttagtcaagattcagcacaccagctagtgcctgctggctct
gtcctggtggatggctga

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_6|144_aa
MRLHSSALGWSMGLGAVEQGVALVEEARAAKEPTEGVGGSGMAACRSQALPRGKAAKARR
EIERSAAEGVGSGLGQPRKGLPQCSGGLKGSSSAAKVGAQAEEAPRGSGGCEDCQHAVTS
HQEPAKLKDDEHKNLYDDLFPLNG

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_6|435_bp
atgcgcctgcactcctcagcccttgggtggtcgatgggactgggcgccgtggagcagggg
gtggcgctcgtcgaggaggctcgggcagcaaaggagcccacggagggggtgggaggctca
ggcatggcggcctgcagatcccaagccctgccccgcgggaaggcagctaaggcccggcga
gaaatagagcgcagcgccgctgagggagtgggctccggccttggccagcccagaaagggg
ctcccacagtgcagtggtggactgaagggctcctcaagtgccgccaaagtgggagcccag
gcagaagaggctccgagagggagcgggggctgtgaggactgccagcacgctgtcacctct
caccaggagcctgctaaactcaaagatgatgagcataaaaacctttatgatgatctgttt
ccacttaatggatag

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_7|317_aa
MDTARTKTFDKQQPKNPEEGISPAIQVELRKVSENDYLAEIIIIADRYLASCKVPCKHRD
FLHHTSLDLSEKSRVEYGETFASYLPLYTGSSAFMMWTHQVSPHTILWVGVQIVDNRNNC
VCQRLRVQTIGGPDDIWLLSSPRILAAVLISALFIKTDDARYNMLSVVQCMSRKELAEMP
GRMNSNPRDPEMRKGCLTYSKKTKEAQRPEKSAGKGRRSEMQSEQWQAPRVCGKDFRFHP
EEEDRSLESFDQGTCLCYSLYLRSVVLSSCTTPKKNEDMLDFEGYHSGKEEGATDTQRNR
VVWKGKRGTTVSWENPF

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_7|954_bp
atggacacagccaggacgaaaacattcgacaagcaacagccaaaaaatccagaggaagga
atttcacctgcaatacaagtagaacttagaaaagtaagtgaaaatgattatctggctgag
atcataatcattgctgatcggtacttggcctcctgcaaagttccgtgcaagcacagagac
tttttacatcatacctctcttgatctgagtgaaaagagcagggtggaatacggtgaaaca
tttgcctcttacctgcctctatacactggatcttcagcatttatgatgtggactcaccaa
gtttcacctcacactatcctatgggtaggtgtccagattgtagataatagaaataattgc
gtttgtcagagactcagggttcaaactattggaggtccagatgacatctggcttctcagc
tcccccagaatactggctgcagtgcttatcagtgcattattcatcaaaactgatgatgca
aggtacaacatgctgtctgtcgttcagtgtatgagtcgaaaggagttggcagaaatgcct
ggcagaatgaacagtaatcccagagatcctgagatgagaaaagggtgtttgacttattca
aagaagaccaaggaagcccaaagaccagagaagagtgcaggaaaggggcggcggtctgag
atgcagtcagagcagtggcaagcccccagagtctgtggcaaagacttcaggtttcatcct
gaagaggaagacaggtctttggagagttttgatcaaggaacttgcctgtgttatagcctg
tacctgcgttcagtggtcctgagctcttgtaccacacccaagaagaatgaggatatgctg
gactttgaagggtaccactccggaaaagaggagggtgccactgacacccagaggaaccga
gtggtatggaaaggaaaacgaggtacaactgtgtcatgggaaaacccattttga

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_8|454_aa
MDKFLDTYTLPRLNQEEVESLNRPITGPEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLAIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
KIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMPFFTELGKTTLKFI
WNQKRARIAKSILSQKNKAGGITLPASNYTTRLQ

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_8|1365_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggacctgaaattgtggcaataatcaatagtttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagccttcgacaaaatt
caacaacccttcatgctaaaaactctcaataaattagctattgatgggacgtatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggtacaagacagggatgccctctctcaccgctcctattc
aaaatagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtttatcta
gaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatc
cccatcaagctaccaatgcctttcttcacagaattgggaaaaactactttaaagttcata
tggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacactacctgcttcaaactatactacaaggctacagtaa

>gi568815580r:32574660_32870591|GENSCAN_predicted_peptide_9|218_aa
MEDEMNEMKREGKFREKRIQRNGQSLQEIWDYVKRPNLHLIGVPESDAENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPKRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
TLKGKPIRLTVDLSAETLRARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLRDFVTTRPALKELLKEVLNMERNNRYQPLQNHAKM

>gi568815580r:32574660_32870591|GENSCAN_predicted_CDS_9|657_bp
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaatacaa
agaaatgggcaaagcctacaagaaatatgggactatgtgaaaagaccaaatctacatctg
attggtgtacctgaaagtgatgcggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccaaaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaagggaagcccatcagactaacagtggatctctcagcagaaaccctacgagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaag
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagtg
ctaaacatggaaaggaacaaccggtaccagccgctgcaaaatcatgccaaaatgtaa