GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:04:24

Sequence gi568815587f:78099596_78313810 : 214215 bp : 45.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  37118  37154   37  1  1   69  101    37 0.901   3.27
 1.02 Intr +  39875  39979  105  0  0   59   42    99 0.766   2.59
 1.03 Intr +  42000  42107  108  1  0   42   93   215 0.947  17.66
 1.04 Term +  48331  48341   11  2  2  106   54     0 0.213  -3.24
 1.05 PlyA +  53404  53409    6                               1.05

 2.04 PlyA -  53885  53880    6                               1.05
 2.03 Term -  69636  69498  139  2  1   93   43    43 0.216  -2.26
 2.02 Intr -  71018  70929   90  1  0   54  100    42 0.571   1.11
 2.01 Init -  74959  74181  779  1  2   68   98  1312 0.876 123.17
 2.00 Prom -  75890  75851   40                              -1.86

 3.00 Prom +  76500  76539   40                              -6.26
 3.01 Init +  77215  77276   62  0  2  116   37   105 0.914   8.92
 3.02 Intr +  78857  78956  100  2  1   55   67    60 0.209   0.71
 3.03 Intr +  83546  83603   58  1  1   49  113    57 0.021   2.76
 3.04 Term +  86911  86993   83  2  2   50   39    88 0.003  -2.04
 3.05 PlyA +  87550  87555    6                              -0.45

 4.00 Prom +  88062  88101   40                              -4.26
 4.01 Init +  92948  93120  173  1  2   98   43   148 0.976   8.21
 4.02 Intr +  96641  97323  683  2  2  144   96  1216 0.964 119.23
 4.03 Intr +  98341  98473  133  2  1  105   75   209 0.990  21.00
 4.04 Intr + 100000 100129  130  1  1   86   81   154 0.969  15.20
 4.05 Intr + 100538 100639  102  1  0   43   95   136 0.920  10.17
 4.06 Intr + 101055 101213  159  2  0   80  105   186 0.921  19.68
 4.07 Intr + 106247 106440  194  1  2  119   30   255 0.991  21.09
 4.08 Intr + 107935 108028   94  1  1   45  109    54 0.517   3.17
 4.09 Intr + 109262 109368  107  1  2   94   99   143 0.999  15.01
 4.10 Intr + 109853 111149 1297  2  1   85   99  1513 0.765 139.40
 4.11 Intr + 114051 114180  130  2  1   97   38   120 0.702   8.17
 4.12 Term + 115383 115456   74  1  2  106   43    95 0.941   4.87
 4.13 PlyA + 115615 115620    6                               1.05

 5.12 PlyA - 115727 115722    6                               1.05
 5.11 Term - 119820 119677  144  0  0  100   45   264 0.970  21.21
 5.10 Intr - 120849 120724  126  0  0   84   46    98 0.962   6.08
 5.09 Intr - 122184 122082  103  2  1   84  101   125 0.993  13.58
 5.08 Intr - 122600 122510   91  0  1   84  108    92 0.999   9.85
 5.07 Intr - 124081 123817  265  1  1   93  115   342 0.999  34.49
 5.06 Intr - 125607 125513   95  1  2   75  105    87 0.990   8.78
 5.05 Intr - 127456 126870  587  0  2  141   78   439 0.938  40.49
 5.04 Intr - 132834 132748   87  2  0   84   76    27 0.163   0.19
 5.03 Intr - 150754 150562  193  2  1   92   97   128 0.466  12.65
 5.02 Intr - 181306 181006  301  1  1   61   80   476 0.922  40.41
 5.01 Init - 186165 186121   45  0  0   84   90    38 0.619   2.28
 5.00 Prom - 194805 194766   40                              -2.46


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  89224  88978  247  2  1   60   90   121 0.856   6.02
S.002 Intr -  89456  89297  160  2  1  106   92    41 0.868   5.86
S.003 Init -  91930  91925    6  1  0  123   92     0 0.880   4.77
S.004 Term + 171134 171188   55  2  1   98   53   107 0.804   5.23


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:78099596_78313810|GENSCAN_predicted_peptide_1|86_aa
MAQLDVIDGIFQSPGRASPLLCGDEKAFEKSHPERQSRKPIASTRGNSTVKWAAEDDDDD
DLDTEKQKTNEDDQTAKKDKLKEGEK

>gi568815587f:78099596_78313810|GENSCAN_predicted_CDS_1|261_bp
atggctcaactagatgtcatagatggcatcttccaatcccctggccgtgcgagtccctta
ctatgtggggatgagaaggcatttgagaagagtcaccccgagcgccaaagccgaaaacca
attgccagtacccgtggcaattctacagtcaaatgggcagctgaagatgatgatgatgat
gatcttgacaccgagaagcagaagaccaatgaagatgaccagacagcaaaaaaggataag
ttaaaagaaggtgaaaaatga

>gi568815587f:78099596_78313810|GENSCAN_predicted_peptide_2|335_aa
MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYIL
NFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRV
QTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQD
PNHLTLDWVANVEGLPEEEYTKQNLKRLWVVPANKQINSFQVFVEEVLKIALSDGFCIDS
SHPHALDFMNNKIIRLIRYRLGELSLLLGKSMRKTENKRSAVMAAPSTDGGLWADGGGWL
GNVACDQLQEQNNPDNRPIKGRDESLAALSAQTAW

>gi568815587f:78099596_78313810|GENSCAN_predicted_CDS_2|1008_bp
atgtccgaccccatcacgctgaacgtcggggggaagctctatacaacctcactggcgacc
ctgaccagcttccctgactccatgctaggcgccatgttcagcgggaagatgcccaccaag
agggacagccagggcaactgcttcattgaccgtgacggcaaagtgttccgctatatcctc
aacttcctgcggacctcccaccttgacctgcctgaggacttccaggagatggggctgctc
cgcagggaggccgacttctaccaggtgcagcccctgattgaggccctgcaggagaaggaa
gtggagctctccaaggccgagaagaatgccatgctcaacatcacactgaaccagcgtgtg
cagacggtccacttcactgtgcgcgaggcaccccagatctacagcctctcctcttccagc
atggaggtcttcaacgccaacatcttcagcacctcctgcctcttcctcaagctccttggc
tctaagctcttctactgctccaatggcaatctctcctccatcaccagccacttgcaggac
cccaaccacctgactctggactgggtggccaatgtggagggcctgccagaggaggagtac
accaagcagaacctcaagaggctctgggtggtgcccgccaacaagcagatcaacagcttc
caggtcttcgtggaagaggtactgaaaatcgctctgagcgatggcttctgcatcgattct
tctcacccacatgctctggattttatgaacaataagattattcgattaatacggtacagg
ttaggtgaactcagccttctgcttggcaaaagcatgagaaagacggagaacaaacgttca
gcagtgatggcagcaccatcgacagacggggggctctgggctgatgggggtggctggctg
ggaaacgtggcctgtgatcagctccaggagcaaaacaaccctgataacaggcccatcaaa
gggagggacgagagtctggcagctctgtctgcccagacagcctggtga

>gi568815587f:78099596_78313810|GENSCAN_predicted_peptide_3|100_aa
MTKSCLYNNNNNNNNNNNKAGATVSIITNPRPCYKRQNDMTRGEFHESAEVCSQKPGLPG
ETDDSWTFTGKVQAVQPWARSWADDDDHNNNKHYNGNNNG

>gi568815587f:78099596_78313810|GENSCAN_predicted_CDS_3|303_bp
atgacgaaatcctgtctctacaacaacaacaacaacaacaacaacaacaacaacaaagca
ggggccacagtgtccatcatcacaaatccacggccctgctacaaaaggcaaaatgacatg
acacgaggggagtttcatgagtcggcggaggtttgcagtcagaaaccagggcttcctgga
gaaactgatgattcctggactttcacaggaaaagttcaagctgtgcagccctgggcacgt
tcctgggcagatgatgatgatcataacaacaacaaacactacaacggcaataataatggc
taa

>gi568815587f:78099596_78313810|GENSCAN_predicted_peptide_4|1091_aa
MVTAVLRLPAWELGQVGRACLLWPGYGLSRGCRLALEIRALMEQLYLNCQLPGLCGVSAG
AMDKILEAVVTSSYPVSVKQGLVRRVLEAARQPLEREQCLALLALGARLYVGGAEELPRR
VGCQLLHVAGRHHPDVFAEFFSARRVLRLLQGGAGPPGPRALACVQLGLQLLPEGPAADE
VFALLRREVLRTVCERPGPAACAQVARLLARHPRCVPDGPHRLLFCQQLVRCLGRFRCPA
EGEEGAVEFLEQAQQVSGLLAQLWRAQPAAILPCLKELFAVISCAEEEPPSSALASVVQH
LPLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGLAAVKKF
SILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLV
KEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWT
SQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQP
LMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTG
TRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLA
FPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYI
EGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKV
EKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENR
YYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAG
GRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVS
FSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNI
LYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGAACCDGGVEFGP
NVTDPQDVTSK

>gi568815587f:78099596_78313810|GENSCAN_predicted_CDS_4|3276_bp
atggtgacagctgtcctcagactgcctgcgtgggagttggggcaggtgggcagggcttgc
ttgctgtggccaggctacggactgagcagaggctgccggctggccttggagatcagagct
ctcatggagcagctctatttgaactgtcagctgccaggcttatgtggtgttagcgcgggc
gccatggacaagatcttggaggcggtggtgacgtcgtcatacccggtcagcgtgaagcag
gggctggttcggcgcgtgctggaggcggcgcggcagccgctggagcgtgagcagtgcctg
gcgctgctggcgctgggcgcgcgcctctacgtgggcggcgcggaggagctgccgcgccgc
gtgggctgccagctgctgcacgtggccggccgccaccaccccgacgtcttcgccgagttc
ttcagcgcgcgtcgcgtgctgcgcctgctgcagggtggcgccggccccccgggcccccgc
gcgctcgcctgcgtgcagctgggtctgcagctgctgcccgaggggcctgcggccgacgag
gtgttcgcgctgctgcggcgcgaggtgctgcgcaccgtgtgcgagcgcccgggccccgcg
gcctgcgcgcaggtggcacggctgctggctcgccacccgcgctgtgtgcccgacggaccc
caccgcctgctcttctgccagcagctggtgcgttgcctcggccgcttccgctgcccagcc
gaaggcgaggagggcgccgtggagttcctagagcaggcccagcaggtgagcgggctcctg
gcgcagctgtggcgcgcacagcccgccgccatcctgccctgcctcaaagagctgttcgca
gtcatctcctgcgcagaggaggagccaccatctagcgccctggccagcgtggtccagcac
ctcccattggagctcatggatggtgttgtccggaacctcagcaatgatgacagtgtgaca
gactcgcagatgctgactgccattagcaggatgattgactgggtgtcctggcccctgggg
aagaatattgacaagtggatcattgcactgctgaagggcctggctgctgttaagaagttc
agcatcttgatcgaggtttcgctcaccaaaattgagaaggttttctctaagctgctgtac
cccatcgtccggggagctgccttgtctgtgctcaagtacatgctcctgaccttccagcac
tcccacgaagccttccacctgctcctccctcacatcccccccatggtggcctctctggtc
aaggaggactcgaactcggggaccagctgcctggagcagctggcggagctggtccactgc
atggtgttccggttcccgggcttcccggatctgtatgagcctgtcatggaggccatcaag
gacctccatgttcccaatgaggaccgcatcaagcagctgctggggcaggatgcctggact
tcgcagaagagcgagctggcgggtttctatccccggctcatggccaagtcagacacgggc
aagattggtctcatcaacctgggcaacacatgctatgtcaacagcatccttcaggcctta
ttcatggcgtctgacttcagacattgtgtgctccgcttgactgagaacaactcacagccc
ctgatgaccaagctgcagtggctctttggcttcctagaacacagccagcggcctgccatt
tccccagagaacttcctctccgcatcctggacgccctggttcagccctggcacccagcag
gactgctcggagtatctgaagtacctgctggatcggctgcacgaagaggagaaaacgggc
acaaggatctgccagaaactcaagcagtccagctcgccctctccgcccgaggagcccccg
gccccaagttcaacctctgtggaaaaaatgtttggaggcaagatagtgactcggatctgc
tgtctctgctgcctcaacgtctcctcccgggaggaggccttcacggacctctctctcgcc
ttccctcctcctgagcgctgtcgccgccgccgcctgggctctgtgatgcgccccacagaa
gacatcacagcccgggagttgcccccaccaaccagtgcacaggggccaggcagggtgggt
cctcggaggcaaaggaaacactgcatcacagaggacaccccccccaccagcctgtacatc
gaaggcctggactccaaggaagctggtgggcagagcagtcaggaggaaaggatagagagg
gaggaagaagggaaggaggagagaacggagaaggaagaagtgggggaggaggaggaaagc
accagaggggaaggagagagggagaaagaggaggaggtggaagaggaagaagagaaggtg
gagaaggagacagaaaaggaggctgagcaggaaaaggaagaagacagcctgggagcgggg
acccacccggatgctgccatcccctccggggagcggacatgtggctctgagggctcccgc
tccgtcctggacctggttaactacttcctgtcccccgagaagctgacagcagaaaaccgc
tactactgcgagtcgtgtgcctccctgcaggatgccgagaaggtggtggagctgagccaa
gggccgtgctacctcatcctcacactgctgcgcttctctttcgacctgcgcaccatgcgg
cgccgcaagatcctggatgacgtctccatccccctgctgctccgcctgccactggctggt
ggccgtggccaggcctatgacctctgcagtgtggtggtgcactctggagtgtcttcggag
agtggtcactactactgctatgcccgtgagggcgctgcccgccctgccgcttctctggga
actgccgataggccagagcccgagaaccagtggtacctgttcaatgacactcgggtgtcc
ttctcttccttcgaatctgtcagcaacgtcacctccttcttccctaaggacacagcctat
gtgctgttttaccggcagcggcccagggaggggcccgaggctgagttgggctcttctaga
gtccggacagagcccaccctgcacaaggacttgatggaagccatttccaaagacaacatc
ctttacctacaggagcaggagaaggaggcccggagcagggcggcctacatctctgcactc
cccacatctccgcactgggggaggggctttgatgaagacaaggatgaggatgaaggctct
ccagggggctgcaatcctgcaggggctgcctgctgtgatggtggtgtggagtttgggccc
aatgtcacagaccctcaagatgtcacatctaagtga

>gi568815587f:78099596_78313810|GENSCAN_predicted_peptide_5|678_aa
MPWLTPVIPALWEAEAWKKRWFILRSGRMSGDPDVLEYYKNDHSKKPLRIINLNFCEQVD
AGLTFNKKELQDSFVFDIKTSERTFYLVAETEEDMNKWVQSICQICGFNQAEESTAELSS
SSQHLLRERKSSAPSHSSQPTLFTFEPPVSNHMQPTLSTSAPQEYLYLHQCISRRAENAS
LWGLIPDSSQCLSSYFKKAVKPVTDDTLMSASFSQGTRASFLMRSDTAVQKLAQGNGHCV
NGISGQVHGFYSLPKPSRHNTEFRDSTYDLPRSLASHGHTKGSLTGSETDNEDVYTFKTP
SNTLCREFGDLLVDNMDVPATPLSAYQIPRTFTLDKNHNAMTVATPGDSAIAPPPRPPKP
SQAETPRWGSPQQRPPISENSRSVAATIPRRNTLPAMDNSRLHRASSCETYEYPQRGGES
AGRSAESMSDGVGSFLPGKMIVGRSDSTNSEDNYVPMNPGSSTLLAMERAGDNSQSVYIP
MSPGAHHFDSLGYPSTTLPVHRGPSRGSEIQPPPVNRNLKPDRKAKPTPLDLRNNTVIDE
LPFKSPITKSWSRANHTFNSSSSQYCRPISTQSITSTDSGDSEENYVPMQNPVSASPVPS
GTNSPAPKKSTGSVDYLALDFQPSSPSPHRKPSTSSVTSDEKVDYVQVDKEKTQALQNTM
QEWTDVRQSSEPSKGAKL

>gi568815587f:78099596_78313810|GENSCAN_predicted_CDS_5|2037_bp
atgccgtggctcacgcctgtaatcccagcactttgggaggctgaggcctggaagaaacgc
tggtttatcctgcggagtggccggatgagcggtgacccagatgttctggaatactacaag
aacgatcactccaagaagcctctgcggatcatcaacctgaacttctgtgagcaggtagat
gcaggcctgacctttaacaagaaggagctgcaggatagttttgtgtttgacatcaagacc
agtgaacgcaccttttacctggtggctgagacagaagaggacatgaataagtgggtccag
agcatctgccagatctgtggcttcaatcaggctgaggagagcacagctgagctcagcagc
tctagccagcaccttctccgagagcgcaagtcctcagccccatcacactccagccagcca
actctgttcacgtttgaaccccctgtgtcaaaccacatgcagcccaccttgtccaccagc
gcacctcaggagtatctctacttgcaccagtgcataagccgaagagcagaaaatgcaagc
ctttggggcctcattccagattctagccagtgtctgtcttcttatttcaagaaggctgtt
aaacctgtaacagatgatacattgatgagtgccagcttctctcagggcaccagagcctct
tttctcatgaggagtgacacagctgtacaaaaacttgcccagggcaatggacactgtgtc
aacgggatcagtggtcaagtccatggcttctatagccttcccaagccgagccggcacaat
acagaattcagagacagtacctacgacctcccccgcagcctggcctcccatggccacacc
aagggcagcctcacaggctccgagacagataatgaggatgtgtacaccttcaagacgccc
agcaacaccctgtgcagggagttcggggacctcctggtagacaatatggatgttccggcc
accccactctcagcctaccagatccctaggacattcactctggacaaaaaccacaatgcc
atgacagtggccactcctggggactcagccatagctcccccaccccgcccccccaagcca
agtcaggcagaaacacctcgatggggcagtcctcagcagagaccgccaatcagtgaaaat
agcagatctgtcgctgccaccatccccagacgcaacaccctccctgcaatggacaacagc
cgacttcaccgagcttcttcctgtgagacctacgagtacccacagcgtggtggagagagt
gcaggccggtctgctgaatccatgagtgatggagttggctctttcctgccagggaaaatg
attgtgggccgatcggacagcaccaattctgaagacaactatgtgcccatgaatccaggt
tcttccaccctgttggccatggaacgagcaggtgataattcccagagcgtctacatccca
atgagcccaggggcccatcactttgactcacttggctacccatcaacaacccttcctgtg
caccgaggccccagcagaggaagtgagattcagccaccccctgtcaaccgcaacctcaaa
cctgatcggaaagcaaagccaacaccacttgacctgaggaacaacaccgtcatcgatgaa
ctccccttcaagtcacctatcaccaagtcttggtctagggccaaccacaccttcaactcc
agctcctcccagtactgccgccccatctccacccagagcatcaccagcacagactcagga
gacagcgaagagaactatgtccctatgcaaaacccagtgtctgcatctcccgttcccagt
ggcacgaacagtcctgcccctaagaagagcaccggcagcgttgattatctggccctggac
ttccagccgagctccccaagcccccaccgcaagccatctacttcatccgtcacctctgat
gagaaggtggactacgttcaggtggacaaggagaagacccaggccctgcagaacaccatg
caggagtggacagacgtgcggcagtcctcagagccttccaagggtgccaagctgtga