Result of FASTA (ccds) for pF1KA1216
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1216, 1368 aa
  1>>>pF1KA1216 1368 - 1368 aa - 1368 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5426+/-0.00112; mu= 21.1362+/- 0.067
 mean_var=58.3268+/-11.398, 0's: 0 Z-trim(101.2): 32  B-trim: 0 in 0/48
 Lambda= 0.167935
 statistics sampled from 6428 (6433) to 6428 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.538), E-opt: 0.2 (0.198), width:  16
 Scan time:  4.910

The best scores are:                                      opt bits E(32554)
CCDS5147.1 MED23 gene_id:9439|Hs108|chr6           (1368) 9250 2250.3       0
CCDS59039.1 MED23 gene_id:9439|Hs108|chr6          (1364) 9198 2237.7       0
CCDS5146.1 MED23 gene_id:9439|Hs108|chr6           (1365) 9171 2231.1       0


>>CCDS5147.1 MED23 gene_id:9439|Hs108|chr6                (1368 aa)
 initn: 9250 init1: 9250 opt: 9250  Z-score: 12094.3  bits: 2250.3 E(32554):    0
Smith-Waterman score: 9250; 100.0% identity (100.0% similar) in 1368 aa overlap (1-1368:1-1368)

               10        20        30        40        50        60
pF1KA1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA1 GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA1 NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA1 SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA1 QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360        
pF1KA1 LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ
             1330      1340      1350      1360        

>>CCDS59039.1 MED23 gene_id:9439|Hs108|chr6               (1364 aa)
 initn: 9198 init1: 9198 opt: 9198  Z-score: 12026.3  bits: 2237.7 E(32554):    0
Smith-Waterman score: 9198; 100.0% identity (100.0% similar) in 1360 aa overlap (1-1360:1-1360)

               10        20        30        40        50        60
pF1KA1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQST
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 HAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKIALLCNA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLI
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 HSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGI
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHF
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGG
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRV
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVC
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMA
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA1 GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQPLVPRE
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA1 NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSY
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA1 SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQ
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA1 QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICN
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360        
pF1KA1 LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ
       ::::::::::::::::::::::::::::::::::::::::        
CCDS59 LKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVDTLT    
             1330      1340      1350      1360        

>>CCDS5146.1 MED23 gene_id:9439|Hs108|chr6                (1365 aa)
 initn: 7239 init1: 7239 opt: 9171  Z-score: 11990.9  bits: 2231.1 E(32554):    0
Smith-Waterman score: 9171; 99.6% identity (99.6% similar) in 1365 aa overlap (1-1359:1-1365)

               10        20        30        40        50        60
pF1KA1 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 METQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQCI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 QWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVIAYILERNACLLPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 YFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNS
              190       200       210       220       230       240

              250       260       270       280       290          
pF1KA1 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQ------HK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::      ::
CCDS51 WKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHK
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KA1 QRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 QRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVL
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KA1 SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDI
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KA1 NKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 NKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNKSLQMNDYKI
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KA1 ALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 ALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVH
              490       500       510       520       530       540

          540       550       560       570       580       590    
pF1KA1 AKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 AKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFK
              550       560       570       580       590       600

          600       610       620       630       640       650    
pF1KA1 SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 SHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLIT
              610       620       630       640       650       660

          660       670       680       690       700       710    
pF1KA1 ALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 ALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKD
              670       680       690       700       710       720

          720       730       740       750       760       770    
pF1KA1 ILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 ILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNEN
              730       740       750       760       770       780

          780       790       800       810       820       830    
pF1KA1 DIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 DIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEF
              790       800       810       820       830       840

          840       850       860       870       880       890    
pF1KA1 STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 STSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPN
              850       860       870       880       890       900

          900       910       920       930       940       950    
pF1KA1 DFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 DFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPI
              910       920       930       940       950       960

          960       970       980       990      1000      1010    
pF1KA1 YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEM
              970       980       990      1000      1010      1020

         1020      1030      1040      1050      1060      1070    
pF1KA1 HLRDRAFLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 HLRDRAFLKRKLVHAIIGSLKDNRPQGWCLSDTYLKCAMNAREENPWVPDDTYYCRLIGR
             1030      1040      1050      1060      1070      1080

         1080      1090      1100      1110      1120      1130    
pF1KA1 LVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 LVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKSQ
             1090      1100      1110      1120      1130      1140

         1140      1150      1160      1170      1180      1190    
pF1KA1 PLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 PLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFT
             1150      1160      1170      1180      1190      1200

         1200      1210      1220      1230      1240      1250    
pF1KA1 ACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 ACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGP
             1210      1220      1230      1240      1250      1260

         1260      1270      1280      1290      1300      1310    
pF1KA1 FLQRFQQERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS51 FLQRFQQERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQV
             1270      1280      1290      1300      1310      1320

         1320      1330      1340      1350      1360        
pF1KA1 EKIICNLKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQVPVSLPVTQ
       :::::::::::::::::::::::::::::::::::::::::::::         
CCDS51 EKIICNLKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSNQ         
             1330      1340      1350      1360              




1368 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 20:46:57 2016 done: Wed Nov  2 20:46:58 2016
 Total Scan time:  4.910 Total Display time:  0.210

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com