GENSCAN 1.0	Date run:  2-Nov-116	Time: 20:31:13

Sequence gi568815592f:154673987_154933392 : 259406 bp : 40.42% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6115   6213   99  0  0  122   45   105 0.943   6.75
 1.02 PlyA +   8289   8294    6                               1.05

 2.00 Prom +   9830   9869   40                              -3.45
 2.01 Init +  15730  15748   19  0  1   72   93     9 0.018   0.09
 2.02 Intr +  33497  34012  516  0  0   -2  102   405 0.303  24.90
 2.03 Term +  35512  35648  137  2  2   33   44    97 0.323  -3.00
 2.04 PlyA +  35760  35765    6                               1.05

 3.00 Prom +  44464  44503   40                              -5.35
 3.01 Init +  59194  59517  324  0  0   55   52   381 0.978  26.58
 3.02 Term +  59671  59940  270  0  0   85   44   186 0.936   8.40
 3.03 PlyA +  65407  65412    6                               1.05

 4.03 PlyA -  65789  65784    6                               1.05
 4.02 Term -  92197  92135   63  1  0   96   39    63 0.210  -0.89
 4.01 Init -  92641  92375  267  1  0   39   35   294 0.789  16.23
 4.00 Prom -  94739  94700   40                              -7.25

 5.00 Prom +  99296  99335   40                              -5.55
 5.01 Init + 100048 100086   39  0  0   87  113    36 0.818   6.24
 5.02 Intr + 104015 104059   45  1  0   95  106    30 0.883   3.19
 5.03 Intr + 113875 114036  162  0  0   80   91   173 0.999  16.05
 5.04 Intr + 118837 118990  154  0  1   88   91    33 0.988   2.32
 5.05 Intr + 121023 121153  131  1  2   49   99    81 0.884   4.79
 5.06 Intr + 127985 128161  177  1  0   95   70   173 0.832  15.39
 5.07 Intr + 129558 129637   80  2  2  104   56    66 0.969   2.43
 5.08 Intr + 131383 131500  118  1  1  106   10    95 0.955   3.05
 5.09 Intr + 134084 134215  132  1  0   49   98    86 0.886   5.62
 5.10 Intr + 134700 134812  113  2  2   60   13   172 0.047   5.16
 5.11 Intr + 136029 136222  194  0  2  -17  103   105 0.022  -0.29
 5.12 Intr + 142315 142358   44  2  2  100   94    18 0.459   0.64
 5.13 Intr + 144493 144606  114  0  0   55  100   134 0.890  11.02
 5.14 Intr + 146191 146347  157  0  1   60   99    91 0.994   6.06
 5.15 Intr + 148290 148423  134  1  2   -6   92   125 0.871   2.94
 5.16 Intr + 150248 150392  145  1  1   35   95    58 0.799   0.13
 5.17 Intr + 153186 153254   69  1  0   93  103    35 0.764   3.74
 5.18 Intr + 156936 157154  219  1  0   73   99   255 0.980  22.45
 5.19 Term + 157953 159409 1457  1  2  110   37  1120 0.999  98.98
 5.20 PlyA + 160052 160057    6                               1.05

 6.14 PlyA - 160265 160260    6                               1.05
 6.13 Term - 198786 198558  229  2  1   67   42   138 0.832   2.22
 6.12 Intr - 201042 200899  144  2  0   57   30   148 0.816   4.38
 6.11 Intr - 203137 202953  185  1  2   -6   81   119 0.060  -0.54
 6.10 Intr - 209214 209026  189  0  0   42   70   112 0.304   3.66
 6.09 Intr - 209769 209639  131  1  2   84   57    38 0.359  -0.21
 6.08 Intr - 215194 215005  190  1  1   54   87   117 0.427   6.44
 6.07 Intr - 216479 216354  126  2  0   72   84   111 0.891   9.06
 6.06 Intr - 226826 226656  171  2  0   77   73    51 0.222   1.72
 6.05 Intr - 244298 244205   94  1  1   13  105    90 0.332   2.25
 6.04 Intr - 246830 246675  156  1  0   71   89   117 0.407   8.30
 6.03 Intr - 247152 246978  175  1  1   96   80    -6 0.384  -2.52
 6.02 Intr - 251244 251100  145  0  1   28  105   106 0.692   5.23
 6.01 Intr - 254632 254536   97  0  1   83   53   111 0.642   6.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  13871  13777   95  0  2   85   49    84 0.829   1.21
S.002 Term -  47968  47812  157  0  1   59   50   141 0.975   3.82
S.003 Term + 134700 134831  132  2  0   60   38   188 0.902   8.11
S.004 Init - 203116 202953  164  1  2   26   81   119 0.833   4.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:154673987_154933392|GENSCAN_predicted_peptide_1|32_aa
IHPESCIALDPRTLSWGLDRDLFPVTIEQQKL

>gi568815592f:154673987_154933392|GENSCAN_predicted_CDS_1|99_bp
attcaccctgaatcttgtattgcattagatccaagaaccctctcttggggtctggatcgg
gacctctttcctgtaacaatagagcagcaaaaattatga

>gi568815592f:154673987_154933392|GENSCAN_predicted_peptide_2|223_aa
MSWFAQACTKEKDLSLKEIQKKLEAAEERRKSEEVQVLKPLAERREYKQEVFEKALENDT
FSRIVEEKLILKVEKIKENEEANLAATMSEGKGGTPRRCAGTRTRRLNSLAEVEEGTACC
TISKPTAHIIMSHAVSVWEMYDIVYKGLINKAELKLKKKNVEPDAVTHTCNPSTLRGQEL
TLELSESSESSISEKSDSLNESLSNNCSRDVNLTPRNAMFSRI

>gi568815592f:154673987_154933392|GENSCAN_predicted_CDS_2|672_bp
atgagctggtttgcccaagcttgtactaaggagaaagacctgtccctgaaggagatccag
aagaaactggaggctgcagaggaaagaaggaagtctgaggaggtccaggtgctgaagcca
ttggcagagaggagggaatacaagcaagaagtctttgagaaggctttggaaaacgacacc
ttcagcagaatcgtggaggaaaagctgatcctgaaagtggaaaaaattaaggaaaatgag
gaggctaatctagctgctactatgtctgaaggaaaaggaggcacgccgcggaggtgcgca
ggaacaaggacgcgcagactcaacagtctggctgaagtggaggagggtacggcatgctgc
accatcagtaaacccactgcccatattataatgagtcacgcagtatcggtatgggaaatg
tatgacatagtttacaaaggactcattaacaaagcagaattaaaattaaaaaaaaaaaat
gtggagccggatgcagtgactcacacctgtaatcccagcactttgcgaggccaagaacta
acattagaattgtctgaatcatcagaatcatctatttcagaaaaatcggattcactaaat
gaatctttgtccaacaactgttccagagatgtgaacctcactcctaggaatgctatgttt
tctaggatttga

>gi568815592f:154673987_154933392|GENSCAN_predicted_peptide_3|197_aa
MPQRSLPRPRGAGRGRGAGGPGAKARAAEPSRAYGRRRSGPSALDGFRAAAGARTVQSPG
GALAGAADPRTARPDSSPPYWMPQPLLPALPPLSSPSGAGSCGPSGGERLCSLERRSPRP
SGHAGAALPLREPFPASACPSTPPRGRSGPLSRQRPLLAATQQPASRSPHPVQWPPPLPP
PGSGPPQRQHGGREDLQ

>gi568815592f:154673987_154933392|GENSCAN_predicted_CDS_3|594_bp
atgccgcagcgctcactcccgcgtccgcggggcgcggggagggggcgaggcgcgggcggc
cccggagccaaggcgagggcagcggagcccagccgggcctacgggcggcgacgctctggc
cccagcgcgctcgatggtttccgcgcggccgccggggctcgcacggtccagtcgccaggg
ggcgcgctagccggcgccgcggatccccgaactgcgcggcccgactcgagtccgccatat
tggatgccgcagccgctgctgccagcgcttcctcctctgtcttcgccgagcggggctggt
tcctgcggcccgagcggcggggagcgcctctgttccctagaacggcgctccccccgccct
agcggccatgccggtgccgctctgccgctgagggagcccttccccgccagcgcgtgccct
tccactccgccccgaggtcgcagcggcccgctctcccgccagcgccccctcctcgcggcc
acgcagcagcccgcgtctcgctctccccacccagtgcagtggccgccgcctcttccgccg
ccgggctcggggcctccgcagcgacaacatggaggccgtgaagaccttcaatag

>gi568815592f:154673987_154933392|GENSCAN_predicted_peptide_4|109_aa
MNLGEIQELMDTSEELTEDNLMKKSASKPVPDGQEAAEEAVPENKSTLDNLAEGLQLSKT
AFDLFLGHKPSYDTGTKIKANGGRRIGAMPTQHEDKGKDFYDDLLLLNE

>gi568815592f:154673987_154933392|GENSCAN_predicted_CDS_4|330_bp
atgaatcttggagaaattcaagagctaatggacacgtcagaggaattaacagaagacaac
ttgatgaagaagagtgcttccaaaccagtgccagacggtcaggaagcagcagaagaagca
gtgccagaaaacaaatctactttagacaatctggcagaagggttacaattatccaagact
gcttttgatttatttttaggacacaaaccctcctatgacacaggcactaaaattaaagcc
aacggtggaagaagaattggtgccatgcctactcaacatgaagacaagggtaaagatttt
tatgatgacctacttctacttaatgaatag

>gi568815592f:154673987_154933392|GENSCAN_predicted_peptide_5|1227_aa
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTP
VLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQ
LIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMD
RFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQP
QKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEE
VFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRS
YSSERRAREREKERQKKGLPPIRSKTLSEQMLGKKISMASELLMIPPRGCAYVCMVHRQD
AFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGF
AEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIP
VAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP
PTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQA
EPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNS
EILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVG
VQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQP
GIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLG
NDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPP
VDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFR
SGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQ
NTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSN
EINKEKSDTVADIESEPVVESTETEGT

>gi568815592f:154673987_154933392|GENSCAN_predicted_CDS_5|3684_bp
atgacccaaattactaaggcagccatcaaagctattaagttctataaacatgtggtacag
agtgttgagaagtttattcagaaatgtaaaccagaatacaaagtacctggactttatgtt
attgactccattgtgcgacaatcccgacatcagtttggtcaagaaaaggatgtgtttgca
cccagatttagtaataacatcattagcactttccagaatttatatcgttgccctggggat
gacaagagtaaaatagtgagagtactaaacttatggcagaagaataatgtatttaagagt
gagattattcagccccttttggatatggcagccgggattccgcctccagttgtcacacct
gttttggccagcactaccactgctatgagcaatactccaggaactcctgtgacacctgtt
actccggccaatgtggtccaaggcttacctgatccgtgggtatctcagataacaaataca
gatacacttgcggctgtagctcagatcttgcaaagtcctcaaggccagcagcttcaacaa
ttaatacaaaccttacagatacaacaacagaagccccagccttccattctgcaggcccta
gatgctggtcttgttgttcagttgcaagctcttacggcacaacttacagctgcagctgca
gctgccaacactcttactcccttagaacagggagtctcctttaacaagaagttgatggat
aggtttgattttggggaagactctgagcatagtgaagaacccaaaaaggaaattccagct
tcacaactttctcacgtttcagaatctgtgaacaattccatttttcatcagatagcagaa
caactacaacagcaaaacctagaacatctcagacagcagctcttggagcagcaacagcct
caaaaggccactcctcaggatagtcaggaaggaacctttgggtcagagcattcagcgtca
ccatcacaagggagtagtcagcagcattttcttgaacctgaagtcaatttggatgattcc
atagatattcagcaacaggatatggatatagatgaagggcaagatggagtggaagaggag
gtctttgaacaagaagctaagaaagtggcggttcgctcaagatcaagaacacattcacga
tctcgttcaagatcaccaagaaaacgaaggtctaggtcacggtctggctctagaaagcgt
aaacacagaaagcgatcacgctcccgctcaagagaaagaaagaggaaatcatcacggtcg
tattcaagtgaaaggagagccagagaaagggagaaagaacgacagaaaaagggattacct
ccaattagatctaaaacactaagtgagcaaatgttaggtaagaaaatcagtatggccagc
gaattgctaatgattcctccccggggctgtgcttatgtctgcatggttcatcgacaagat
gcatttcgagctcttcagaaactcagttctggatcatataaaattgggtccaaggtcatt
aagatcgcttgggctttaaacaaaggtgtaaaaacagaatacaaacaattctgggatgtg
gatcttggagttacatatataccatgggaaaaagttaaagtggatgacttggaaggtttt
gcagaaggaggcatgattgatcaggagactgtaaatactgagtgggaaactgtgaaaagc
tcagaacctgttaaagagacggtccagacaactcagagcccaactccagttgaaaaggag
acagtggtcacaacccaggcagaggttttccctcctcctgttgctatgttgcagattcca
gtggcgccagccgtgcctacagttagtttagtcccaccagcatttcctgtgtcgatgccg
gttcctcctcctggattcagtccaatccctccacctccttttttaagagcaagttttaac
ccttcacaaccaccacctggtttcatgccgcctccagttcccccacctgttgtgccaccc
cctacgattccaccagtagtaccaacatctttagtgcagccgtcattatccatgacaccg
gaaactgtgaaagatgttggatttggtagccttgttataccaggcggttctgttgccagc
aatcttgctacttccgctctgccagctggaaatgtttttaatgctccaactaaacaggca
gagcctgaagaaaaagtacctcatcttatagaccaccagatttcttctggtgaaaacacc
agatcagtgattccaaatgatatttcaagtaatgctgcaattttaggaggacagccgcca
aatgtgacaagcaattctggaattctgggagtccaaagaccaaatgtatcaagtaattct
gaaattcttggggtccggccatctaatgtttccagtagttctgggattattgcagcccaa
ccaccaaatattctaaataactctggaatattgggaatacagccacccagtgtgtcaaat
agttctggacttttgggagtgctacccccaaatatacctaacaattctggacttgtagga
gtacagccaccaaatgttccaaatactcctggacttctgggaacacagccaccagctgga
cctcaaaacttaccccctttaagtatccctaatcaaaggatgcccacaatgccaatgtta
gacattcgtccgggactaataccacaggcacctgggccaagattccctttaatacagcct
ggaattccaccccaacggggaatcccacccccatcggtacttgattcagctcttcatcca
ccaccccgtggaccttttcctccaggagatatttttagtcaaccagaaagacctttttta
gctcctggaagacaaagcgtagacaatgttactaacccagaaaaaaggataccacttggg
aatgataacattcaacaggaaggagatagagattaccggtttcctcctatagaaaccagg
gaaagcattagtagacctccccctgtggatgttagagatgtggttgggcggcctatagat
ccaagagaaggtcctggacggcctccactagatggtagggatcattttggaagacctcct
gtagatataagagagaatcttgtgaggccaggtatagatcatcttggtcgaagagaccac
tttggctttaatccagagaagccctgggggcatagaggagattttgatgagagagagcat
cgggttctaccggtctatggtggtccaaaaggcttacatgaagaaagaggtagatttcgg
tctggaaactatcgatttgatcctagaagtggtccttggaaccgaggatttggacaagaa
gttcacagagattttgatgaccgcagaagaccctgggagaggcaaagggatagggatgac
agagattttgatttctgcagagaaatgaatggaaatcgtcttggacgagacagaattcaa
aacacttgggttccccctcctcatgctcgggtttttgattattttgaaggggccacttct
caacgaaaaggtgataatgtgcctcaggttaatggtgaaaatacagagagacatgctcag
ccaccacctataccagtacagaatgatcctgaactttatgaaaaactgacatcttcaaat
gaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaaccagtggtagaa
agcacagaaactgaggggacataa

>gi568815592f:154673987_154933392|GENSCAN_predicted_peptide_6|677_aa
XIAMQSLKILSKIKCQARRELNNSTACKERPLEVAGMLGGHVEASREYQMLSHVGNPDYP
HALATEQATSPSTESGSAGFKVGRGGGIVSETNHLAFNPRTSIPFLWAHFINESRPFAFL
LRSSEGSASTLNQGPCEFHESDVVTAPSSPHKHVDSRKMVEIPNLKSSGSKCRQPSQREG
EAEDTADLITPRAPRGTQRSNPSFALMSTTVMDSPVAIDGPQEAFPVGKDAQSRVSLGHV
SEESPVQIPIFPLLSLTGSSSVIDLKGDERGHHLLTGPVATAPKAKKLKPTPYGVTKDTS
NPSGARRLFQASGLKIPQMLSRHSLGMMTSSLACNSRKLAFSLLENQNIRPLPSIRILSG
LPQFLFGSKFEANLDVLVPREVIFQEDYKGNIATNIEQTHNLCPSHSSSPHSQGFTYCVL
TLNPHIYTLLSIIKSGNYRQDFLAEHRECSRLSPKVGFITCLLPSVFAVEGMLQQLHGRV
LVVTGSLLRRAQILKAISQMSHAAVKCRFKNEKDDKDKALQDTEHTGALRSFELGPRDTI
IWGEEGSHGESWSRQTLIKECEGSTELGASHYNHVAHHLQHTTAFSITLRGIHGCIQHHA
QGKLQDARQVPISLIAFPTPPLSTVHGCISTARCHISAMAPITLSSNYLPDCIVDSSRAE
TLLSFSVCLVPMCLLNK

>gi568815592f:154673987_154933392|GENSCAN_predicted_CDS_6|2034_bp
nngattgcaatgcagtctctgaaaatactctccaaaatcaagtgtcaggcccggagagaa
ctaaacaactctacggcttgcaaggagcgccctcttgaggtagcagggatgcttggggga
catgtagaagcttccagagagtaccagatgttgtcccatgtggggaatccagactacccc
catgcccttgctacagagcaggccaccagcccctctactgagagtggctcagccggcttt
aaagtggggaggggaggaggaattgtttcagagaccaatcatctggcatttaacccaaga
acttccattccgtttttgtgggcacattttataaatgagtcaaggccatttgcattttta
ttaaggtcttctgagggatcggccagcaccctgaaccagggaccctgtgaatttcatgag
tctgacgtggtaactgcaccatcttccccacacaagcatgtggattctcgaaagatggtg
gaaatcccaaacctaaagtcatcaggaagcaagtgcaggcagcccagccaacgtgaagga
gaagctgaggacacagctgatctgattactcccagagcaccgcgcggaacacaaagatca
aacccatcttttgcccttatgagtacaacagtcatggactctccagtggccatagatgga
ccgcaggaggccttcccagtaggtaaggatgcccagtcacgagtctcccttggtcatgtc
tccgaggagagccctgttcagatccccatcttccccctcctttccttgactgggagctcc
tctgttattgatttaaaaggtgatgaaagaggccaccaccttctcacaggtccggtggca
acagcgccaaaggctaagaagctcaaacctacgccctatggtgttaccaaagatacatcc
aatccctcaggtgcacgtcgcttatttcaagccagtggccttaaaatccctcaaatgctc
tccaggcactctctgggaatgatgacaagttcactggcctgtaattctaggaagctagct
ttttctttgcttgaaaatcaaaacattcgcccacttccaagcatcagaatcctctccggc
ttgccacagttcctgtttggcagcaagtttgaggccaacctggatgttctggttcccagg
gaagtcatttttcaagaagattataaaggtaatattgccaccaacattgaacaaacccat
aacctgtgtcccagtcattcttcaagccctcactctcaaggctttacttactgtgtgctc
acactcaatccacacatctacaccttgctcagtataataaagagtggtaattacagacag
gatttccttgcggaacatcgggaatgttccagactttccccaaaagtaggttttatcacc
tgcttgctgccaagtgtttttgctgtggaaggaatgctgcagcagctgcatggaagggtg
ctggtggtcactggcagcctgcttaggagagcacagattttgaaagcaatttcccaaatg
tcacatgcagctgtcaagtgtagatttaaaaatgaaaaagatgacaaagacaaagccttg
caggacacagagcacacaggagctctcaggagctttgaacttggtccaagagacacaatt
atttggggagaagagggctcacatggtgaaagctggtcaagacaaactctaataaaagaa
tgtgaaggttccacagagcttggagcctctcactacaaccatgttgctcatcacctgcag
cacacgactgcattcagcatcacactcaggggtatccacggctgcattcagcatcatgct
caaggcaagctgcaggacgcccgtcaagtgccaatttctctaatcgccttccctactcca
cccctttccacggttcatggatgcatttccacagcacgctgccacatctctgccatggcg
ccaatcactctgtccagtaattaccttcctgactgcattgtggattcctcaagggcagag
accttgctttcttttagcgtgtgcctggtgcctatgtgtttgctgaataaatga