GENSCAN 1.0	Date run:  2-Nov-116	Time: 19:59:03

Sequence gi568815583f:68545160_68825971 : 280812 bp : 48.37% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    122    117    6                               1.05
 1.04 Term -  14978  14343  636  2  0   57   48   216 0.067   8.75
 1.03 Intr -  21905  21761  145  1  1   77   49    91 0.100   4.38
 1.02 Intr -  32884  32706  179  1  2   36  -13   169 0.499   0.32
 1.01 Init -  34105  33422  684  1  0   78   78   326 0.676  23.70
 1.00 Prom -  56688  56649   40                              -5.66

 2.05 PlyA -  57075  57070    6                               1.05
 2.04 Term -  63771  63611  161  1  2  113   54    72 0.644   4.40
 2.03 Intr -  67594  67501   94  1  1   84   70    21 0.075  -0.56
 2.02 Intr -  72338  72284   55  1  1   90  105    33 0.817   4.18
 2.01 Init -  74177  74122   56  2  2   52   59    53 0.768  -0.44
 2.00 Prom -  77754  77715   40                              -2.26

 3.00 Prom +  78947  78986   40                              -6.16
 3.01 Init +  94085  94168   84  1  0   75   53   107 0.706   4.72
 3.02 Intr + 100001 100201  201  1  0  123   96   492 0.970  52.98
 3.03 Intr + 107306 107471  166  1  1   88   12    44 0.002  -3.67
 3.04 Intr + 118822 118971  150  2  0   47   52    77 0.001   0.13
 3.05 Intr + 128977 129151  175  2  1   65   76    89 0.072   4.40
 3.06 Intr + 138572 138643   72  2  0  118   -2    79 0.004   0.42
 3.07 Intr + 141851 141951  101  2  2   71   89    34 0.018   1.55
 3.08 Intr + 149219 149421  203  0  2   46   49    87 0.631  -0.40
 3.09 Intr + 149981 150097  117  1  0  133   97   204 0.958  26.46
 3.10 Intr + 151468 151492   25  0  1   87   75     8 0.239  -3.00
 3.11 Intr + 154950 155050  101  1  2   67   78    77 0.393   4.43
 3.12 Intr + 165573 165722  150  2  0  120   91   319 0.999  35.76
 3.13 Intr + 166383 166547  165  2  0  128   44   284 0.997  28.16
 3.14 Intr + 168766 168882  117  0  0  133   76    97 0.906  13.66
 3.15 Intr + 169400 169504  105  1  0   50   62   132 0.976   7.21
 3.16 Intr + 170056 170152   97  0  1   90   97   218 0.999  22.48
 3.17 Intr + 173539 173651  113  2  2   60  110   259 0.533  25.40
 3.18 Intr + 173985 174075   91  2  1   82   66    80 0.997   4.77
 3.19 Intr + 174254 174393  140  0  2   60   94   134 0.652  11.38
 3.20 Term + 180684 180815  132  2  0  117   36   356 0.975  31.39
 3.21 PlyA + 180993 180998    6                               1.05

 4.03 PlyA - 182196 182191    6                               1.05
 4.02 Term - 209956 209821  136  0  1  136   36   112 0.726   8.29
 4.01 Init - 223299 223238   62  0  2   78   73    34 0.067   1.62
 4.00 Prom - 228382 228343   40                               0.14

 5.10 PlyA - 232604 232599    6                               1.05
 5.09 Term - 234983 234922   62  0  2  112   42   114 0.998   7.17
 5.08 Intr - 235314 235224   91  0  1  106   29   157 0.581  11.17
 5.07 Intr - 237894 237797   98  1  2   38   94   293 0.978  24.63
 5.06 Intr - 239436 239238  199  0  1   91   64   428 0.999  39.62
 5.05 Intr - 242376 242254  123  0  0   73  119    35 0.983   5.88
 5.04 Intr - 242760 242611  150  0  0  105   94   138 0.927  16.46
 5.03 Intr - 248483 248254  230  0  2   63   71    83 0.163   1.69
 5.02 Intr - 274574 274404  171  0  0   64   52    95 0.283   3.41
 5.01 Intr - 276099 275740  360  1  0  111   92   180 0.291  15.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  85230  85041  190  2  1   62   48   149 0.944   5.22
S.002 Init -  86796  86636  161  0  2   75   82    76 0.817   3.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:68545160_68825971|GENSCAN_predicted_peptide_1|547_aa
MQKLRGGAGARARRAGAAAAARGGGGRGSGSSRLAPRAPPAARPSLGAALRAGSAQGPLV
GARPPLVADVSPECAFIIDEPPSPQEGEAGRKGERERARAGGRGEEEGPGTRYKGGGGGR
RRRKRSPPAAVPRASRSIAGRRAPLLPESGRAPGSAALTPSGLRTPRGWARLAPGTCRLG
ERAAPRALGCPAGPGTLVKSQAGRPRRCAGKEGGRVRPLEARKVGPWAIQNRGEGGGEEL
AEVEAEGFSKQDSLASPEVLASCSTVITGAIHLDSEGNVIYEHLLCGKSYYDTHFTDEKT
EAQNPENREPQTQVGEWGSASLSHLLDTLPLRWQAQAAPSQCLSTARVQVPGHVIPLRDS
SNRQSPPGSPCWAGRDLVRSALPSEALPASRPYTGLNPQQTSCTPNAISASAYQRTPTGT
HAKSHTPCALRARAFAGDLLVLERRSSEEGCGPRPLVGTPWSCTWSGLGRRSLTDSPPGR
TPESTAPTGKPETEAQTGKGLGKEKVWGPLTISTLVPSAPRLVPAALPAGRLGTVNFALP
ATPSPPR

>gi568815583f:68545160_68825971|GENSCAN_predicted_CDS_1|1644_bp
atgcagaaactccgcggcggagcgggggcgcgggcgcggcgtgcgggggcggcggcggcg
gcccggggcggcggcggaagggggtccggcagctcccggctcgctccccgcgccccgccg
gcggctcggccgagcctgggggctgcgctccgggcgggcagcgcgcagggaccgctcgtc
ggcgctcgcccgccgctcgtcgctgatgtcagccccgaatgtgcatttataatagatgag
cctccttcgccgcaggaaggcgaggcaggaagaaagggagagagggagagggcccgggct
ggggggcggggggaggaagaggggccgggaactcgctacaaaggaggaggcggagggagg
aggaggaggaagcgcagcccgccagcggccgtgccccgagcctcccgctcgatcgccggc
cgccgggcaccgctgctcccggagtccggacgggcgcccgggtccgcggccttaacccct
tcgggcctgcggacgccacgcggctgggcgaggctggctcccggcacctgccggctggga
gaacgggcggcgccccgggctctcgggtgtcccgctggcccggggacgctggtgaagtca
caggctggacggccgaggcgctgcgcgggcaaagaaggcggtcgggttcgccccctggag
gctcgcaaagtcggcccgtgggccatacagaaccgcggagagggtggaggggaggagtta
gcagaggtggaagcagaggggttctccaagcaggacagcctggcaagcccggaagtgctg
gcttcctgctccacggtaattaccggtgcaattcacctggacagcgaaggcaacgtcata
tatgagcacctgctctgtggaaagtcttattatgatacccacttcacagatgagaaaact
gaagcacagaacccagagaacagagaacctcagacccaagtgggagagtggggatcagcc
agtctgagtcatttattggacacgctgcctcttcgctggcaagctcaggcagcccccagc
caatgcctgagcactgcacgggtgcaagtgcccggccacgtcatcccattgcgggactct
tcaaatcggcagtctccaccgggatctccctgctgggctggcagagacttggtcagatct
gcattgccgtctgaggctctccccgccagtcgtccttacacaggtttaaatccccaacaa
acttcttgcactcctaacgccatctcagcgtctgcttaccagaggaccccaaccggcaca
catgccaagagccacacgccttgtgctctccgtgcgcgcgcgtttgcgggagacctgctg
gtcctggagcgccgcagctccgaggaaggatgcgggccgcgccccctggtgggcacgccg
tggagctgcacgtggagcggtctcgggcgccgcagcctcaccgacagtccccctgggaga
accccagagagcactgcaccaaccggaaaaccggaaacggaggcccagacagggaaaggg
ttagggaaagaaaaagtctgggggcctcttaccatcagcacgcttgttccgtctgctccc
cgtctggtccctgcagctcttccagcgggccggcttggcacggtcaacttcgccctcccc
gctaccccctcaccaccccgctga

>gi568815583f:68545160_68825971|GENSCAN_predicted_peptide_2|121_aa
MHTLQQDENLSDKIQAKGKWECGGPVWASDLLKVTQLRRRLRREDHEFLHVKSRAHGQLE
SKLSSADQVPSGSFGKHLLNGWMEAEIANTVEGNDDAEDESAEFQLPSWSPITLQSQLWE
A

>gi568815583f:68545160_68825971|GENSCAN_predicted_CDS_2|366_bp
atgcatacattgcagcaggatgaaaatctaagtgataaaattcaggctaaaggaaagtgg
gaatgtggaggtccagtatgggcaagtgacctgctcaaggtcacacagctgaggaggaga
ctgcggcgtgaggatcatgagtttcttcatgtgaagtcacgagctcatggtcagttagag
agcaagttatcatcagcagaccaagtacccagtgggagttttggtaagcacttgttgaac
ggatggatggaggctgaaatagcaaacacagtggaagggaatgatgatgctgaggatgag
agtgcggaatttcaactcccctcctggagccccataactcttcaaagccagctgtgggaa
gcctga

>gi568815583f:68545160_68825971|GENSCAN_predicted_peptide_3|834_aa
MRLSYKGALNPAWSGVGLCRGQKELDDLMSWRPQYRSSKFRNVYGKVANREHCFDGIPIT
KNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQIQATGRTGLETELPATPTGTWQKEK
KPGLDIKSLGSPYNPAILSPSCTPGLWGWDERPKFRKLIISSVDEDEEQLELSYYTAGSV
QCYSHFGKLDDRSILHFDHGESKSLDVAESSAATALCWWNAGSTAFLLGHDAALWLGEAF
QRRSNPLGSESSLLGASGRACSTSRQESVALVKTTVIMVLTACCSGIAISHLSHVDSIWI
PVFCAGTLEAWHSVVAERGNRGSEKFINFPKATTFTAKNQQSCNSNTGLWDSEDYAFNHR
ALCTGVQDVHCRRTLIHIVERMARTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSE
DTSTLPTFTSGAPEASATEALPPPIPAGMVNLLLTRHDIQTQAWEVRIWEIPEGGLKRNM
TEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVILCM
SFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWN
TRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPY
LSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQE
DIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDL
LENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC

>gi568815583f:68545160_68825971|GENSCAN_predicted_CDS_3|2505_bp
atgaggctcagctataagggagccctgaacccggcatggagtggggtggggctgtgcagg
ggccagaaggagttggatgatctgatgtcctggcgtccgcaataccgtagctccaagttc
cggaatgtctacgggaaggtggccaaccgggagcactgcttcgatgggatccccatcacc
aagaatgtgcacgacaaccacttctgtgccgtcaacacccgcttcctggccatcgtcacc
gagagcgcagggggcggctccttcctcgtcatccccctggagcagatccaggccacagga
agaacagggctagaaacagagctacctgctaccccaactggcacctggcagaaagagaag
aaacccggcctagatatcaagagtctgggttctccctataacccagccattctcagtccc
agctgtacaccgggtctctggggctgggatgaaaggccaaaatttagaaagctgataata
tcaagtgttgatgaggatgaggagcagctggaactctcatactacactgctgggagtgta
cagtgttacagccactttggaaaactggatgacagaagtattctacattttgatcatggt
gagtctaagagcttggatgtggctgagagtagcgcagccaccgccctctgctggtggaat
gctggtagcacagctttcctgcttggccacgatgctgccctctggctaggcgaggctttc
cagagaagaagcaaccctttggggtctgagagctccctgctgggggcttcgggacgagca
tgttctacctctcggcaagagagtgtggccttggtcaagaccactgtcatcatggtgctc
acagcctgttgttctggcattgccatctcacatctttctcatgtggactcaatatggatt
cctgtgttctgtgctggtacactggaagcatggcactctgtggttgcagagaggggaaac
cgaggctcagagaagttcattaactttcctaaggccacaactttcactgctaaaaatcag
cagagctgtaattcaaacacaggcctgtgggactccgaagactatgctttcaaccacagg
gcactgtgtaccggtgttcaagatgtacactgcagaaggacgctcattcatatcgtagag
agaatggctcgtacaggcaggattgaacccaactaccccaaggtctgcggccaccagggc
aatgtgctggatatcaaatggaaccccttcatcgacaacatcattgcctcgtgctcggag
gacacgtcgactctaccaactttcaccagtggagcacctgaggcatcggccaccgaggcc
ctccctccacccattccagctggaatggtcaacttgctgctcaccagacacgacatccag
acccaggcttgggaggtgcggatctgggagatccccgagggcgggctgaagcggaacatg
acggaggcgctcctggagctgcacgggcacagccggcgtgtggggctggtcgagtggcac
cccaccaccaacaacatcctgttcagcgctggctacgactacaaggtcctcatctggaac
ctggatgtgggtgagccggtgaagatgattgactgccacacggatgtgatcctctgcatg
tccttcaacacggacggcagcctgctcaccaccacgtgcaaggacaagaagctgcgtgtg
attgagccccgctctggccgtgttctgcaggaggccaactgcaaaaaccacagagtgaac
cgggtggtgttcctggggaacatgaagcggctcctcacgacaggggtctccaggtggaac
acaagacagattgccctctgggaccaggaggacctctccatgcccctgatcgaagaggaa
attgatgggctctctggcctcctgttccccttctatgatgctgacacccacatgctctac
ctggctggaaagggtgatggaaacatccggtactacgagatcagcactgagaagccctac
ctgagttacctcatggagttccgctccccagccccgcagaaaggcctaggggtcatgccc
aagcacgggctggatgtgtcagcctgcgaggtgttccgcttctacaagctggtgactctc
aagggcctgatcgagcccatctccatgatcgtgccccggaggtcagattcctaccaggaa
gacatttacccaatgacaccaggcacggagccagcactgaccccggatgaatggctggga
ggcatcaaccgagatcccgtgctgatgtctttgaaagaaggctataagaagtcctcaaaa
atggtatttaaggctcccatcaaagaaaagaagagtgttgtggtcaacggaatagattta
ttagaaaatgtcccacccaggacagagaatgagctccttcgaatgttcttccggcagcag
gatgagattcgacggttgaaagaggagctggcccagaaggacatccgcattcggcagctc
cagctggaactgaaaaacttgcgcaacagccccaagaactgttag

>gi568815583f:68545160_68825971|GENSCAN_predicted_peptide_4|65_aa
MSYHSSTKAVKIKETDNTKSCPGILLQSSATPLLRKLPVQVLIKDVCLPCYKQERKHYFL
DCVFT

>gi568815583f:68545160_68825971|GENSCAN_predicted_CDS_4|198_bp
atgagttatcactcatccactaaagcagtgaaaattaaggagactgacaacaccaaaagt
tgccctggcatactgctgcaaagctccgcaacgcctttgctcaggaagctccccgtgcag
gttctcatcaaggatgtctgcctcccctgctacaaacaggaacgaaaacactacttcctg
gattgcgtctttacataa

>gi568815583f:68545160_68825971|GENSCAN_predicted_peptide_5|494_aa
XRTCGPAPGRTLRRRLAGKAGRLGPRGTVTFPSPAIPPTPLTQPQSSRRAPQPPRNLKGS
VSGTTTKWPSLPGRLRSPPIGPFPPPPPLPLAVARRPSAAIGSGRCRSSMGPQIPPPRRS
APSGFPKMPAFGPWCPPARTPGPSFSVLGLSAAIRRLLNKWARETLSGRELPGAGAREAF
EECTLARPQSCYLAHWTGVVYWWLSPPSRPPHLLLARTPTLAYCFFRVSSANSVAGVPHV
ERAGDLHAEHWVIQVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLN
KLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCE
VTNLNDYRENVFKLLPQLTYLDGYDRDDKEAPDSDAEGYVEGLDDEEEDEDEEEYDEDAQ
VVEDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGGMAAFLLSAEEERGQ
KRKREPEDEGEDDD

>gi568815583f:68545160_68825971|GENSCAN_predicted_CDS_5|1485_bp
naacgcacctgcggccccgcccccggccgaacgctgaggcggcggctggctggcaaggcc
gggcggctcggccctcgaggcacagtcaccttcccttcccccgccattccgcccaccccc
ctcactcagccacagagcagccgccgcgctcctcagccgccccgaaatctaaaggggtcc
gtctccggcaccactaccaaatggccgagcctccctggccggctgcgcagcccgcccatt
ggtcccttcccccccccgccgccactgccattggctgttgcccggagaccctcggcggcg
attggctcgggccgctgccgctcgtccatggggccgcagatcccgcctccacggcgatca
gctccttccggcttccccaagatgccagcctttgggccctggtgccccccagctcgaacc
cccggcccgtctttctcagtgctgggcttgtcggcagccattcggcgcctgcttaataaa
tgggcacgggaaactttgtcaggacgcgagctgcccggagctggcgcccgtgaggcattt
gaagaatgcaccctggcccggccccagtcctgctacctggcacactggactggagttgtt
tactggtggctgtctcctcccagccggccaccacacctcttgctggcaaggaccccgacc
ttggcttactgtttcttccgtgtctcctcagccaacagtgtcgcaggtgtgccccatgtg
gagagggctggagacctgcatgcagagcactgggtcattcaggtgaaagaacttgtcctg
gacaacagtcggtcgaatgaaggcaaactcgaaggcctcacagatgaatttgaagaactg
gaattcttaagtacaatcaacgtaggcctcacctcaatcgcaaacttaccaaagttaaac
aaacttaagaagcttgaactaagcgataacagagtctcagggggcctggaagtattggca
gaaaagtgtccgaacctcacgcatctaaatttaagtggcaacaaaattaaagacctcagc
acaatagagccactgaaaaagttagaaaacctcaagagcttagaccttttcaattgcgag
gtaaccaacctgaacgactaccgagaaaatgtgttcaagctcctcccgcaactcacatat
ctcgacggctatgaccgggacgacaaggaggcccctgactcggatgctgagggctacgtg
gagggcctggatgatgaggaggaggatgaggatgaggaggagtatgatgaagatgctcag
gtagtggaagacgaggaggacgaggatgaggaggaggaaggtgaagaggaggacgtgagt
ggagaggaggaggaggatgaagaaggttataacgatggagaggtagatgacgaggaagat
gaagaagagcttggtggtatggcagcctttttactctcagctgaagaagaaaggggtcag
aagcgaaaacgagaacctgaagatgagggagaagatgatgactaa