Result of FASTA (ccds) for pF1KA0773
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0773, 360 aa
  1>>>pF1KA0773 360 - 360 aa - 360 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4952+/-0.000833; mu= 7.4060+/- 0.050
 mean_var=128.5632+/-25.926, 0's: 0 Z-trim(111.4): 11  B-trim: 0 in 0/50
 Lambda= 0.113114
 statistics sampled from 12361 (12366) to 12361 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.38), width:  16
 Scan time:  2.850

The best scores are:                                      opt bits E(32554)
CCDS47734.1 FAM131B gene_id:9715|Hs108|chr7        ( 360) 2440 409.0 3.2e-114
CCDS5882.1 FAM131B gene_id:9715|Hs108|chr7         ( 332) 2248 377.6 8.1e-105
CCDS3262.2 FAM131A gene_id:131408|Hs108|chr3       ( 366)  506 93.4 3.3e-19
CCDS54689.1 FAM131A gene_id:131408|Hs108|chr3      ( 281)  451 84.3 1.3e-16
CCDS41270.1 FAM131C gene_id:348487|Hs108|chr1      ( 280)  394 75.0 8.4e-14


>>CCDS47734.1 FAM131B gene_id:9715|Hs108|chr7             (360 aa)
 initn: 2440 init1: 2440 opt: 2440  Z-score: 2164.1  bits: 409.0 E(32554): 3.2e-114
Smith-Waterman score: 2440; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)

               10        20        30        40        50        60
pF1KA0 MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN
              310       320       330       340       350       360

>>CCDS5882.1 FAM131B gene_id:9715|Hs108|chr7              (332 aa)
 initn: 2248 init1: 2248 opt: 2248  Z-score: 1995.3  bits: 377.6 E(32554): 8.1e-105
Smith-Waterman score: 2248; 100.0% identity (100.0% similar) in 332 aa overlap (29-360:1-332)

               10        20        30        40        50        60
pF1KA0 MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS
                                   ::::::::::::::::::::::::::::::::
CCDS58                             MDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS
                                           10        20        30  

               70        80        90       100       110       120
pF1KA0 MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG
             40        50        60        70        80        90  

              130       140       150       160       170       180
pF1KA0 KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS
            100       110       120       130       140       150  

              190       200       210       220       230       240
pF1KA0 VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI
            160       170       180       190       200       210  

              250       260       270       280       290       300
pF1KA0 ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP
            220       230       240       250       260       270  

              310       320       330       340       350       360
pF1KA0 AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN
            280       290       300       310       320       330  

>>CCDS3262.2 FAM131A gene_id:131408|Hs108|chr3            (366 aa)
 initn: 539 init1: 255 opt: 506  Z-score: 458.3  bits: 93.4 E(32554): 3.3e-19
Smith-Waterman score: 583; 38.3% identity (61.7% similar) in 368 aa overlap (3-357:24-362)

                                    10         20         30       
pF1KA0                      MGCIGSRTVGNE-VIAVDWKGL-KDVDQINMDSTSSLHG
                              :  :: :... . ::.:  : . ..  .. :. .:.:
CCDS32 MPMISVLGKMFLWQREGPGGRWTCQTSRRVSSDPAWAVEWIELPRGLSLSSLGSARTLRG
               10        20        30        40        50        60

         40        50        60        70        80        90      
pF1KA0 -SSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMK
        :   :::.    .: : :  .... ::...::: .:  .   :.:::.::. :::. .:
CCDS32 WSRSSRPSS----VD-SQDLPEVNVGDTVAMLPKSRRALTIQEIAALARSSLHGISQVVK
                   70         80        90       100       110     

        100       110       120       130       140       150      
pF1KA0 DHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAG
       :::::::::.::::::.:::.::.:     :. :  ...   ..:::::.::.:::: ::
CCDS32 DHVTKPTAMAQGRVAHLIEWKGWSK-----PSDSPAALESAFSSYSDLSEGEQEARFAAG
         120       130       140            150       160       170

        160       170       180       190       200       210      
pF1KA0 VMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWP-
       : :::::.:: : ::::.:::: . .: .:    ... ...  : .:  :.   .: .  
CCDS32 VAEQFAIAEAKLRAWSSVDGEDSTDDSYDE----DFAGGMDTDMAGQLPLGPHLQDLFTG
              180       190       200           210       220      

            220       230       240         250        260         
pF1KA0 HSY---VSQGMYCLGSSDAWEASDQSLIASPAT--GSYLG-PAFDDSQPSLHEMGPSQ-P
       : .   : ::     :. .  .: ..: .:  .   . :: ::   ::    :.  .. :
CCDS32 HRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARLASQLLGDELLLAKLP
        230       240       250       260       270       280      

      270        280       290       300       310       320       
pF1KA0 ASGYSALEP-PPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPR
        :  ::..   :: . :.          :  .:  :    :.: ::: : :.: . : : 
CCDS32 PSRESAFRSLGPLEAQDS----------LYNSPLTESC--LSPAEEEPAPCKDCQPLCP-
        290       300                 310         320       330    

       330        340       350       360 
pF1KA0 EDPEMST-ALSRKVSDVTSSGVQSFDEEEGEANN 
         :  ..   .:..::..:::: :.::.:.:    
CCDS32 --PLTGSWERQRQASDLASSGVVSLDEDEAEPEEQ
             340       350       360      

>>CCDS54689.1 FAM131A gene_id:131408|Hs108|chr3           (281 aa)
 initn: 551 init1: 241 opt: 451  Z-score: 411.5  bits: 84.3 E(32554): 1.3e-16
Smith-Waterman score: 528; 40.2% identity (61.8% similar) in 301 aa overlap (67-357:1-277)

         40        50        60        70        80        90      
pF1KA0 GSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMK
                                     .::: .:  .   :.:::.::. :::. .:
CCDS54                               MLPKSRRALTIQEIAALARSSLHGISQVVK
                                             10        20        30

        100       110       120       130       140       150      
pF1KA0 DHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAG
       :::::::::.::::::.:::.::.:     :. :  ...   ..:::::.::.:::: ::
CCDS54 DHVTKPTAMAQGRVAHLIEWKGWSK-----PSDSPAALESAFSSYSDLSEGEQEARFAAG
               40        50             60        70        80     

        160       170       180       190       200       210      
pF1KA0 VMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWP-
       : :::::.:: : ::::.:::: . .: .:    ... ...  : .:  :.   .: .  
CCDS54 VAEQFAIAEAKLRAWSSVDGEDSTDDSYDE----DFAGGMDTDMAGQLPLGPHLQDLFTG
          90       100       110           120       130       140 

            220       230       240         250        260         
pF1KA0 HSY---VSQGMYCLGSSDAWEASDQSLIASPAT--GSYLG-PAFDDSQPSLHEMGPSQ-P
       : .   : ::     :. .  .: ..: .:  .   . :: ::   ::    :.  .. :
CCDS54 HRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARLASQLLGDELLLAKLP
             150       160       170       180       190       200 

      270        280       290       300       310       320       
pF1KA0 ASGYSALEP-PPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPR
        :  ::..   :: . :.          :  .:  :    :.: ::: : :.: . : : 
CCDS54 PSRESAFRSLGPLEAQDS----------LYNSPLTESC--LSPAEEEPAPCKDCQPLCP-
             210                 220         230       240         

       330        340       350       360 
pF1KA0 EDPEMST-ALSRKVSDVTSSGVQSFDEEEGEANN 
         :  ..   .:..::..:::: :.::.:.:    
CCDS54 --PLTGSWERQRQASDLASSGVVSLDEDEAEPEEQ
        250       260       270       280 

>>CCDS41270.1 FAM131C gene_id:348487|Hs108|chr1           (280 aa)
 initn: 417 init1: 255 opt: 394  Z-score: 361.3  bits: 75.0 E(32554): 8.4e-14
Smith-Waterman score: 399; 33.8% identity (57.9% similar) in 240 aa overlap (51-287:51-272)

               30        40        50        60        70        80
pF1KA0 LKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGI
                                     :: ::  .  .. :.. :   .   . :..
CCDS41 QGADPLNPDLPSGRTPTVAPDCVIGKDKQMDFCWDPWQRCFQTTNGYLSDSRSRPGNYNV
               30        40        50        60        70        80

               90       100       110       120       130       140
pF1KA0 GALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDA
       .::: ::. :. .:.:::.::::::..:::::.:::.::.  ::     . :    . . 
CCDS41 AALATSSLVGVVQSIKDHITKPTAMARGRVAHLIEWKGWSAQPA-----GWELSPAEDEH
               90       100       110       120            130     

              150       160       170       180       190       200
pF1KA0 YSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELM
       :  : :  .:::: ::: :::::.:::: ::::.: :..  ...  : :    .. . ..
CCDS41 YCCLPDELREARFAAGVAEQFAITEATLSAWSSLDEEELHPENS--PQGIVQLQDLESIY
         140       150       160       170         180       190   

              210       220       230       240       250       260
pF1KA0 DSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSL
         ::.: ..: .       ....  ..: .    :  :    :.:..   :   . :   
CCDS41 -LQDSLPSGPSQ-------DDSLQAFSSPSPSPDSCPSPEEPPSTAGIPQPPSPELQHRR
            200              210       220       230       240     

              270          280       290       300       310       
pF1KA0 HEMGPSQPASGYSALEPP---PLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAG
       .  : . : .:    .::   : . . . :                              
CCDS41 RLPGAQGPEGG---THPPGSLPSMDSGSLWEEDEVFYN                      
         250          260       270       280                      




360 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 19:42:33 2016 done: Wed Nov  2 19:42:33 2016
 Total Scan time:  2.850 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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