Result of FASTA (ccds) for pF1KA0761
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0761, 551 aa
  1>>>pF1KA0761 551 - 551 aa - 551 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5892+/-0.000869; mu= 8.6155+/- 0.052
 mean_var=132.0927+/-25.937, 0's: 0 Z-trim(109.8): 13  B-trim: 0 in 0/55
 Lambda= 0.111592
 statistics sampled from 11171 (11180) to 11171 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.343), width:  16
 Scan time:  3.580

The best scores are:                                      opt bits E(32554)
CCDS41362.1 CLCC1 gene_id:23155|Hs108|chr1         ( 551) 3785 620.8 1.3e-177
CCDS793.1 CLCC1 gene_id:23155|Hs108|chr1           ( 501) 2689 444.4 1.5e-124
CCDS60215.1 CLCC1 gene_id:23155|Hs108|chr1         ( 430) 2168 360.5 2.4e-99
CCDS60214.1 CLCC1 gene_id:23155|Hs108|chr1         ( 366) 1698 284.8 1.2e-76


>>CCDS41362.1 CLCC1 gene_id:23155|Hs108|chr1              (551 aa)
 initn: 3785 init1: 3785 opt: 3785  Z-score: 3302.4  bits: 620.8 E(32554): 1.3e-177
Smith-Waterman score: 3785; 100.0% identity (100.0% similar) in 551 aa overlap (1-551:1-551)

               10        20        30        40        50        60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
              490       500       510       520       530       540

              550 
pF1KA0 RGQDPVSSPCG
       :::::::::::
CCDS41 RGQDPVSSPCG
              550 

>>CCDS793.1 CLCC1 gene_id:23155|Hs108|chr1                (501 aa)
 initn: 3435 init1: 2680 opt: 2689  Z-score: 2349.4  bits: 444.4 E(32554): 1.5e-124
Smith-Waterman score: 3339; 90.9% identity (90.9% similar) in 551 aa overlap (1-551:1-501)

               10        20        30        40        50        60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
CCDS79 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL-------
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
                                                  :::::::::::::::::
CCDS79 -------------------------------------------FHDFETWKWRFEDSFGV
                                                      120       130

              190       200       210       220       230       240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
              140       150       160       170       180       190

              250       260       270       280       290       300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
              200       210       220       230       240       250

              310       320       330       340       350       360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
              260       270       280       290       300       310

              370       380       390       400       410       420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
              320       330       340       350       360       370

              430       440       450       460       470       480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
              380       390       400       410       420       430

              490       500       510       520       530       540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
              440       450       460       470       480       490

              550 
pF1KA0 RGQDPVSSPCG
       :::::::::::
CCDS79 RGQDPVSSPCG
              500 

>>CCDS60215.1 CLCC1 gene_id:23155|Hs108|chr1              (430 aa)
 initn: 2923 init1: 2168 opt: 2168  Z-score: 1897.1  bits: 360.5 E(32554): 2.4e-99
Smith-Waterman score: 2685; 78.0% identity (78.0% similar) in 551 aa overlap (1-551:1-430)

               10        20        30        40        50        60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
CCDS60 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL-------
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
                                                                   
CCDS60 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
                                                             ::::::
CCDS60 ------------------------------------------------------LAFAQH
                                                                   

              250       260       270       280       290       300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
     120       130       140       150       160       170         

              310       320       330       340       350       360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
     180       190       200       210       220       230         

              370       380       390       400       410       420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
     240       250       260       270       280       290         

              430       440       450       460       470       480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
     300       310       320       330       340       350         

              490       500       510       520       530       540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
     360       370       380       390       400       410         

              550 
pF1KA0 RGQDPVSSPCG
       :::::::::::
CCDS60 RGQDPVSSPCG
     420       430

>>CCDS60214.1 CLCC1 gene_id:23155|Hs108|chr1              (366 aa)
 initn: 2452 init1: 1697 opt: 1698  Z-score: 1489.3  bits: 284.8 E(32554): 1.2e-76
Smith-Waterman score: 2086; 66.4% identity (66.4% similar) in 551 aa overlap (1-551:1-366)

               10        20        30        40        50        60
pF1KA0 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLPDENKGD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
CCDS60 ADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGL-------
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KA0 MHYDAEIILKRETLLEIQKFLNGEDWKPGALDDALSDILINFKFHDFETWKWRFEDSFGV
                                                                   
CCDS60 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KA0 DPYNVLMVLLCLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQH
                                                                   
CCDS60 ------------------------------------------------------------
                                                                   

              250       260       270       280       290       300
pF1KA0 QAEVAKMEPLNNVCAKKMDWTGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKAL
                                                                 ::
CCDS60 ----------------------------------------------------------AL
                                                                   

              310       320       330       340       350       360
pF1KA0 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 AVTFTTFVTEPLKHIGKGTGEFIKALMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVL
         120       130       140       150       160       170     

              370       380       390       400       410       420
pF1KA0 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRR
         180       190       200       210       220       230     

              430       440       450       460       470       480
pF1KA0 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGE
         240       250       260       270       280       290     

              490       500       510       520       530       540
pF1KA0 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
         300       310       320       330       340       350     

              550 
pF1KA0 RGQDPVSSPCG
       :::::::::::
CCDS60 RGQDPVSSPCG
         360      




551 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 19:40:45 2016 done: Wed Nov  2 19:40:45 2016
 Total Scan time:  3.580 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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