GENSCAN 1.0	Date run:  2-Nov-116	Time: 19:30:34

Sequence gi568815594r:75545433_75762025 : 216593 bp : 40.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 PlyA -   1072   1067    6                               1.05
 1.14 Term -   7027   6885  143  2  2  -32   42   255 0.009   6.01
 1.13 Intr -  10281  10135  147  1  0   57   78    75 0.019   2.69
 1.12 Intr -  16779  16660  120  1  0   65   65    83 0.010   3.25
 1.11 Intr -  38199  38025  175  0  1   30   30   172 0.012   4.19
 1.10 Intr -  46493  46387  107  0  2   63   92    69 0.290   3.81
 1.09 Intr -  50908  50811   98  0  2  109   71    32 0.544   2.33
 1.08 Intr -  51804  51503  302  0  2   58   80   185 0.922   9.31
 1.07 Intr -  52780  52645  136  0  1   63   99    86 0.980   6.85
 1.06 Intr -  54937  54849   89  1  2   82   65    54 0.977   0.35
 1.05 Intr -  58524  58385  140  1  2   92   84    88 0.982   8.06
 1.04 Intr -  60202  60090  113  0  2   82   82    34 0.979   1.30
 1.03 Intr -  61929  61751  179  0  2   74   71   106 0.923   5.30
 1.02 Intr -  69017  68823  195  2  0   60  101    49 0.755   2.09
 1.01 Init -  80556  80389  168  0  0   46  113   167 0.831  14.59
 1.00 Prom -  81316  81277   40                              -7.65

 2.04 PlyA -  82566  82561    6                               1.05
 2.03 Term -  84821  84606  216  2  0   54   42   115 0.576  -0.34
 2.02 Intr -  84952  84873   80  2  2  104   42    90 0.901   4.35
 2.01 Init -  85472  85028  445  2  1   81   84   233 0.567  16.43
 2.00 Prom -  98722  98683   40                              -3.35

 3.14 PlyA -  99318  99313    6                               1.05
 3.13 Term - 100270  99998  273  1  0   55   48   369 0.999  24.09
 3.12 Intr - 101024 100906  119  0  2   96  106   128 0.999  14.66
 3.11 Intr - 101725 101597  129  2  0   70   80   162 0.999  13.35
 3.10 Intr - 103309 103207  103  1  1   73  109   146 0.999  14.03
 3.09 Intr - 109814 109634  181  1  1   43   72   294 0.992  22.25
 3.08 Intr - 110438 110336  103  0  1   54   79   154 0.995   9.41
 3.07 Intr - 111582 111492   91  0  1   51  100   105 0.999   6.65
 3.06 Intr - 112298 112125  174  2  0   34  100   143 0.997   9.31
 3.05 Intr - 113492 113411   82  1  1   94  101    94 0.995  10.02
 3.04 Intr - 116617 116499  119  1  2   94   99    45 0.252   4.54
 3.03 Intr - 127951 127776  176  2  2   65   85   216 0.192  17.74
 3.02 Intr - 128408 128094  315  0  0   21   53   263 0.746  11.21
 3.01 Init - 129863 129803   61  2  1   65   96    78 0.993   7.76
 3.00 Prom - 136038 135999   40                              -4.75

 4.00 Prom + 141301 141340   40                              -6.55
 4.01 Init + 141953 142022   70  1  1   84   91    25 0.577   3.69
 4.02 Intr + 143258 143364  107  0  2   52  115    43 0.612   2.41
 4.03 Intr + 146740 146768   29  0  2  115  111   -15 0.348  -0.50
 4.04 Intr + 149937 150012   76  0  1   85  121    -9 0.422   0.70
 4.05 Term + 151192 151308  117  0  0   96   35    88 0.761   1.86
 4.06 PlyA + 152126 152131    6                               1.05

 5.04 PlyA - 154185 154180    6                               1.05
 5.03 Term - 179315 179115  201  2  0   66   39   222 0.941  11.51
 5.02 Intr - 179943 179668  276  0  0   29   23   218 0.432   6.19
 5.01 Init - 186769 186731   39  1  0   64   81    73 0.400   4.44
 5.00 Prom - 199788 199749   40                              -2.85


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  18682  18820  139  2  1  145   37   103 0.898   9.50
S.002 Init -  38229  38025  205  0  1   89   30   176 0.811  11.26
S.003 Init +  85703  85829  127  1  1   73   82   196 0.972  17.87
S.004 Term +  89582  89745  164  0  2   88   43    89 0.822   1.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:75545433_75762025|GENSCAN_predicted_peptide_1|703_aa
MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH
ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH
NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYG
KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL
PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQEL
QLKVQKDARNVSLSKKSQNRKKEKEKDDSLVEERKTLVVQDTNADPKIKDYKLFKIKGSK
IDGEKAEKGNRASNASCLHDSRTSHNKIVPSTSLKDCSNVSVDHTRNPSVAIPPLTHNLS
AVAPSINSGMGTETIPIQGYRVDEKTKKCSIPFVKPNRHSPSGIYNINVTTLVTRNSRLT
KKESKILSESRIPSLAAIDLHTPSITLHQMCGLLAKCLQFHIVGAFIVSLGVAAVCKIAV
AEPRKKTYADFYRNYDSVKDLEEMGKAVPHTYILFHRRTLEMSVVSPTHLLAMADWTTDR
HSTHSLSAYLLKKRNKRERALPGGFLTPVVCSGELGIILRPPTRVYAASLLCFCPGGPSG
SIPEEGMVIIADGSSMHVIAPEDLPVEQDVEVEDSDSDDPDPV

>gi568815594r:75545433_75762025|GENSCAN_predicted_CDS_1|2112_bp
atggaaaaatatgaaaacctgggtttggttggagaagggagttatggaatggtgatgaag
tgtaggaataaagatactggaagaattgtggccataaagaagttcttagaaagtgacgat
gacaaaatggttaaaaagattgcaatgcgagaaatcaagttactaaagcaacttaggcat
gaaaacttggtgaatctcttggaagtgtgtaagaaaaaaaaacgatggtacctagtcttt
gaatttgttgaccacacaattcttgatgacttggagctctttccaaatggactagactac
caagtagttcaaaagtatttgtttcagattattaatggaattggattttgtcacagtcac
aatatcatacacagagatataaagccagagaatatattagtctcccagtctggcgttgtc
aagctatgcgattttggatttgcgcgaacattggcagctcctggggaggtttatactgat
tatgtggcaacccgatggtacagagctccagaactattggttggtgatgtcaagtatggc
aaggctgttgatgtgtgggccattggttgtctggtaactgaaatgttcatgggggaaccc
ctatttcctggagattctgatattgatcagctatatcatattatgatgtgtttaggtaat
ctaattccaaggcatcaggagctttttaataaaaatcctgtgtttgctggagtaaggttg
cctgaaatcaaggaaagagaacctcttgaaagacgctatcctaagctctctgaagtggtg
atagatttagcaaagaaatgcttacatattgaccccgacaaaagacccttctgtgctgag
ctcctacaccatgatttctttcaaatggatggatttgctgagaggttttcccaagaacta
cagttaaaagtacagaaagatgccagaaatgtttctttatctaaaaaatcccaaaacaga
aagaaggaaaaagaaaaagatgattccttagttgaagaaagaaaaacacttgtggtacag
gataccaatgctgatcccaaaattaaggattataaactatttaaaataaaaggctcaaaa
attgatggagaaaaagctgaaaaaggcaatagagcttcaaatgccagctgtctccatgac
agtaggacaagccacaacaaaatagtgccttcaacaagcctcaaagactgcagcaatgtc
agcgtggaccacacaaggaatccaagcgtggcaattcccccacttacacacaatctttct
gcagttgctcccagcattaattctggaatggggactgagactataccaattcagggttac
agagtggatgagaaaactaagaagtgttctattccatttgttaaaccgaacagacattcc
ccatcaggcatttataacattaatgtgaccacattagtaactcgaaattccaggctaaca
aagaaagagagcaaaattctttcagaatctcgaattccttctctggctgctattgacctg
cacacccccagtattacattacatcagatgtgtggtcttctggccaaatgtctgcaattt
catattgttggagcctttattgtatccctgggggttgcagctgtctgtaagattgctgtg
gctgaaccaagaaagaagacatatgcagatttctacagaaattatgattccgtgaaagat
ttggaggagatggggaaggctgtccctcatacatatattctgtttcatcgacgaaccctg
gaaatgtcagttgtcagtcctacgcaccttctggctatggctgattggaccactgataga
cactcaactcattcactgtctgcttacctacttaaaaagcgaaacaagagggagagggca
ttacccggaggcttcctgaccccggtggtttgcagtggagagttggggatcattcttagg
cccccaaccagggtttatgctgcttctctgctctgcttttgtccaggaggtccttcagga
agtattccagaagaaggcatggttatcatagcagatggcagctctatgcatgttattgcc
cctgaagatcttccagtggaacaagatgtggaggtggaagacagtgacagtgatgatcct
gaccccgtgtag

>gi568815594r:75545433_75762025|GENSCAN_predicted_peptide_2|246_aa
MESRSGRAYATQGARRPPLPQRRCYEGNRIAFCIVFAVLHNRHLYPSRGHHNRLLPLGKA
ERRLLTRTKACGDAGPLRVREQNLGRALGEGAGWLALSQSWLVTTRLGQSEEGRPGALGA
GEKPPPLAAPRPTPSPRGSWSGAGSQAPGVGACRERILTWAVSVSQDFVPMVGDRCELAA
DRGPPASLPASPWTRDCVRRRNHNSAGIASLLGSIFWTCEPYAFHLKFVSKLKTFGSFYA
NGLKKR

>gi568815594r:75545433_75762025|GENSCAN_predicted_CDS_2|741_bp
atggaatcccggtcaggccgcgcctacgcgactcagggcgcccggcgcccgcccctgccc
cagcggcgatgctatgagggaaaccgtatcgcattttgcatagtcttcgcagtcctacat
aaccgccacctttacccttcgcgtgggcatcacaatcgcctcctcccgctggggaaggca
gaaaggcgcctcctgacgagaaccaaggcgtgtggggacgcagggcctctgcgtgtcagg
gagcagaacctgggccgagccctaggtgaaggggcggggtggttggccctgagccaatca
tggctcgtgacgactcggctcggccaatcagaagaagggaggcctggcgctctcggggcg
ggtgagaaaccgcccccccttgcagctccgcggccaacgccttcgcccaggggtagttgg
agcggtgcaggttcccaggctccaggtgttggtgcctgccgtgaacgcattctgacctgg
gccgtatctgtctcccaagactttgtgcctatggttggggacagatgtgagcttgcggcg
gaccgaggcccacctgcctccctgcctgcttcgccctggactcgtgactgcgtccgcaga
agaaatcacaacagcgctggaattgctagtttgctaggcagcatcttttggacctgcgaa
ccatatgcatttcacctcaaatttgtttccaagttgaaaacctttgggtctttctatgcg
aacggattgaagaaacggtaa

>gi568815594r:75545433_75762025|GENSCAN_predicted_peptide_3|641_aa
MVKNIYNSIARKSSKPETLEARLQQQPADTYSERLLNSLLPINKKDQNISLQKTLRCCEP
ALACAIRKKGGKAGASGPEKGSLLVTSNQRTLILALGRFRFPGFPGASVCERGSVLRVLR
RGTREAPGAREEVVVRQTNSRLSGFRGFRVVGGRGRRAIRTRRTRSSATLLTSARRTRRR
RWLEHLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDAS
GKPQEAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKF
MQTFVLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQ
ENANSGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTP
PPAEPVSLPQEPPKPRVEAKPEVQSQPPRVREQRPRERPGFPPRGPRPGRGDMEQNDSDN
RRIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDD
SEPVQRILIAKPIMFRGEVRLNVEEKKTRAARERETRGGGDDRRDIRRNDRGPGGPRGIV
GGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQMEGRFTGQRR

>gi568815594r:75545433_75762025|GENSCAN_predicted_CDS_3|1926_bp
atggtgaagaatatttataatagcattgcacggaagagctccaaaccggaaacacttgaa
gctcgtctacagcagcaacctgcagacacctattcagagagattactaaattccctcctt
cccattaataaaaaggaccagaatatcagtctacaaaagacactgcgttgctgcgaacca
gctctcgcttgcgcgatcaggaagaagggcggcaaggctggagcctcgggaccggagaaa
ggcagcctgcttgtgacgtcaaatcagcggactcttatcttggctttaggccggttccgg
ttccccggctttccgggcgcgagcgtgtgcgagcgcggcagcgtactgcgcgtgctccgc
agagggacacgggaagcgcctggcgcccgggaagaggtggttgtgaggcagacgaactcg
cggctctccggcttccgaggcttccgagttgtcggaggaagggggcggcgagcaataaga
acccgccgcacccggtcctcagcgactcttctgacctccgcgcgacgtacccgccgccgc
cgttggctggagcatttgacattgtgcagcaaagaaatggttatggagaagcccagtccg
ctgcttgtagggcgggagtttgtgaggcaatattatactttgctgaataaagctccggaa
tatttacacaggttttatggcaggaattcttcctatgttcatggtggagtagatgctagt
ggaaagccccaggaagctgtttatggccaaaatgatatacaccacaaagtattatctctg
aacttcagtgaatgtcatactaaaattcgtcatgtggatgctcatgcaaccttgagtgat
ggagtagttgtccaggtcatgggtttgctgtctaacagtggacaaccagaaagaaagttt
atgcaaacctttgttctggctcctgaaggatctgttccaaataaattttatgttcacaat
gatatgtttcgttatgaagatgaagtgtttggtgattctgagcctgaacttgatgaagaa
tcagaagatgaagtagaagaggaacaagaagaaagacaaccatctcctgaacctgtgcaa
gaaaatgctaacagtggttactatgaagctcaccctgtgactaatggcatagaggagcct
ttggaagaatcctctcatgaacctgaacctgagccagaatctgaaacaaagactgaagag
ctgaaaccacaagtggaggagaagaacttagaagaactagaggagaaatctactactcct
cctccggcagaacctgtttctctgccacaagaaccaccaaagccaagagtcgaagctaaa
ccagaagttcaatctcagccacctcgtgtgcgtgaacaacgacctagagaacgacctggt
tttcctcctagaggaccaagaccaggcagaggagatatggaacagaatgactctgacaac
cgtagaataattcgctatccagatagtcatcaactttttgttggtaacttgccacatgat
attgatgaaaatgagctaaaggaattcttcatgagttttggaaacgttgtggaacttcgc
atcaataccaagggtgttgggggaaagcttccaaattttggttttgtggtttttgatgac
tctgaaccagttcagagaatcttaattgcaaaaccgattatgtttcgaggggaagtacgt
ttaaatgtggaagagaaaaaaacaagagctgcaagagagcgagaaaccagaggtggtggt
gatgatcgcagggatattaggcgcaatgatcgaggtcccggtggtccacgtggaattgtg
ggtggtggaatgatgcgtgatcgtgatggaagaggacctcctccaaggggtggcatggca
cagaaacttggctctggaagaggaaccgggcaaatggagggccgcttcacaggacagcgt
cgctga

>gi568815594r:75545433_75762025|GENSCAN_predicted_peptide_4|132_aa
MIVRPPQPCGTVSPLNLFFIPVPGQKPWMIHKKKFHREQISVKTTLPCLARIPLARLRMN
PVPSACSLTSVPGGDRYRCLGSEGQDRSWAKKSKCPVALVKNIRCVNDVSMADNCQLSSS
CSQSSLSSWKED

>gi568815594r:75545433_75762025|GENSCAN_predicted_CDS_4|399_bp
atgattgtgagacctcctcagccatgtggaactgtaagtccgctgaacctctttttcatc
ccagtcccagggcaaaaaccttggatgatccataaaaagaaattccacagggaacagatt
tctgtaaaaactactttgccatgtttagcaagaattccactagctcgtttgagaatgaac
cctgtgcctagtgcttgctctctaacgtctgtgcctggaggtgacaggtacaggtgtcta
gggtctgagggtcaagacagaagctgggctaagaagtctaagtgcccagtggccttggta
aaaaacattagatgtgtaaatgatgtgagcatggcagacaactgccagctttctagcagt
tgttcccaatcatcattgtcgtcatggaaagaggactaa

>gi568815594r:75545433_75762025|GENSCAN_predicted_peptide_5|171_aa
MGAVNTGDNNGGKPNALTNSWVLNLLAVFPNAPVSDCEGGSRTSGSSRPVQTSERERGRG
PRPRGAWEAVRASSAAHPSLPVRYHLRTTLLARASGPTELRGAAAGLGPNPALYTLLLLP
PPPPTRRPLQPSKPGNSRQQRPRCACAGTWHYVAARRLKAKGERRREEPLS

>gi568815594r:75545433_75762025|GENSCAN_predicted_CDS_5|516_bp
atgggagcagtcaacactggggacaacaacggggggaagccaaatgctctcaccaacagc
tgggttttaaaccttctcgcagttttccccaacgccccagtttcagactgcgagggaggg
agcaggacttcaggctcctctcggccagtgcagacgagcgaaagagaaagagggaggggc
ccacggccccgaggggcgtgggaggcagttcgggccagctcggccgcgcatccgtccctt
cccgtgcggtaccacctgcggaccactctcctagcccgagcttcagggcctacagagctg
cggggcgcggccgccggcctgggccccaatcccgcactctacacactcctactgctgcca
ccaccgcctccaactcggcggccactccagccctctaagcccggaaacagccgccagcag
cggccaagatgcgcatgcgcggggacgtggcattacgtggcggctcgaaggttgaaggca
aaaggggagcggaggcgagaggaacctcttagctag