GENSCAN 1.0	Date run:  2-Nov-116	Time: 19:12:35

Sequence gi568815581f:5980659_6220658 : 240000 bp : 46.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  22096  22239  144  2  0   26  102    81 0.027   3.55
 1.02 Intr +  54434  54592  159  0  0   67   75    79 0.101   4.46
 1.03 Term +  64074  64204  131  1  2   74   37    97 0.419   1.54
 1.04 PlyA +  64658  64663    6                               1.05

 2.00 Prom +  69304  69343   40                              -2.26
 2.01 Init +  71755  71826   72  0  0   86   59    63 0.649   4.27
 2.02 Term +  78845  78916   72  1  0   89   55    38 0.117  -1.49
 2.03 PlyA +  83308  83313    6                               1.05

 3.04 PlyA -  83417  83412    6                               1.05
 3.03 Term -  83790  83581  210  0  0   81   42   173 0.908   9.29
 3.02 Intr -  84783  84747   37  2  1   67   56    23 0.342  -4.74
 3.01 Init -  86160  86057  104  0  2   46   61   136 0.744   6.41
 3.00 Prom -  88989  88950   40                              -6.46

 4.00 Prom +  92670  92709   40                              -1.36
 4.01 Init + 100001 100427  427  1  1   83   80   608 0.736  55.97
 4.02 Intr + 107332 107446  115  2  1  102  101   126 0.995  14.81
 4.03 Intr + 109663 109847  185  1  2   97   75   344 0.988  33.43
 4.04 Intr + 114444 114565  122  1  2  102   69    92 0.915   8.91
 4.05 Intr + 118931 119016   86  1  2  111   81    53 0.932   5.52
 4.06 Intr + 126940 127063  124  1  1  -10   59    98 0.105  -2.31
 4.07 Intr + 128949 129108  160  2  1   91   98   107 0.359  11.56
 4.08 Intr + 130113 130277  165  1  0   54  115    77 0.788   6.93
 4.09 Intr + 137330 137530  201  0  0   82   84   230 0.957  21.26
 4.10 Term + 139651 140003  353  2  2  109   44   765 0.902  68.85
 4.11 PlyA + 142493 142498    6                               1.05

 5.04 PlyA - 143763 143758    6                               1.05
 5.03 Term - 174629 174519  111  2  0   79   42   110 0.973   4.06
 5.02 Intr - 174933 174841   93  0  0   89  100    42 0.559   5.66
 5.01 Init - 182597 182541   57  2  0   85   42   121 0.444   6.51
 5.00 Prom - 185685 185646   40                              -5.46

 6.00 Prom + 186103 186142   40                              -2.66
 6.01 Init + 189683 189732   50  1  2   86   72    65 0.933   5.12
 6.02 Intr + 193596 193723  128  0  2   37   48   165 0.620   7.72
 6.03 Intr + 193945 194081  137  2  2   91   66    32 0.487   1.59
 6.04 Intr + 196747 196879  133  0  1   34   92    68 0.391   2.02
 6.05 Term + 198464 198630  167  0  2   67   43    59 0.444  -2.62
 6.06 PlyA + 199128 199133    6                               1.05

 7.02 PlyA - 199772 199767    6                               1.05
 7.01 Sngl - 213910 213047  864  1  0   36   42  1165 0.587 102.58
 7.00 Prom - 217174 217135   40                              -0.36

 8.00 Prom + 222266 222305   40                              -5.36
 8.01 Init + 223183 223322  140  0  2   78   65    71 0.060   3.41
 8.02 Term + 236273 236318   46  2  1  138   41    51 0.007   2.08
 8.03 PlyA + 238673 238678    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_1|144_aa
XHCQVVESTCWIVLATVDEPLIQPVPVMGLPMVSTALVSVLSSRLGTKGSDSHLPIGHCG
QSGPSKHSIDSGAPQLRAPGGSYLSFMIKSMPLTWPSAPFTGSHGKLWDLEAMNQLYLAG
KKSVTKSVVAFGLGKEKCRKELIQ

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_1|435_bp
ngccattgccaggtcgtagagagcacctgttggatcgtcttggccacagtggatgagccc
ctgattcaacctgtaccggtcatggggcttcccatggtgtccactgccctggtcagtgtg
cttagctcaaggttgggcactaaaggcagtgacagccatcttccaattggccactgtggc
cagagcggcccatcaaagcacagcattgactcaggagctccccagctcagggcccctggt
ggctcctacctctccttcatgatcaagtccatgcctctcacctggccctcagcgcctttc
acagggagtcatgggaagctatgggacctagaggccatgaatcagctttaccttgcaggc
aagaaaagtgttacaaagagtgtagtagccttcggtttgggaaaagaaaagtgccgaaaa
gaattaatacagtaa

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_2|47_aa
MVNIPEAQDEEGWGTDEIEDEGSALGGNWVEAVREPDVHLSPVSPQV

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_2|144_bp
atggtgaatatacctgaagcgcaggatgaggagggatggggaacagatgagattgaagac
gaaggcagtgctcttggtgggaactgggtggaggctgtcagagagcctgatgtacacctg
agccctgtcagccctcaggtgtga

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_3|116_aa
MTRNLSVEEFREGFLEEVTCKLAFRGEVGIIWVTSLAVCSTKMLAHKGQQLGKSEGQKAL
RDHRLQKLVGLEAEPVGSAIHWKVHGYWGSKKALVQEDGKSGPCFAPPAYLGCTSQ

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_3|351_bp
atgactcgcaacctcagtgtggaggaattcagggaaggcttcctggaggaggtgacatgt
aagctggcttttagaggagaagtgggcatcatctgggtcaccagcttggctgtatgctcc
accaagatgttggcccacaaggggcagcagctgggcaagtctgagggacagaaagcattg
agggaccacagattgcagaagttggtggggttagaggcagagcctgtgggatcagccatc
cactggaaggtgcacgggtactggggcagcaagaaagccctggtgcaagaggatggcaaa
agtggtccctgctttgctcctcctgcctacctggggtgcaccagccagtag

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_4|645_aa
MAKPFFRLQKFLRRTQFLLFFLTAAYLMTGSLLLLQRVRVALPQGPRAPGPLQTLPVAAV
ALGVGLLDSRALHDPRVSPELLLGVDMLQSPLTRPRPGPRWLRSRNSELRQLRRRWFHHF
MSDSQGPPALGPEAARPAIHSRGTYIGCFSDDGHERTLKGAVFYDLRKMTVSHCQDACAE
RSYVYAGLEAGAECYCGNRLPAVSVGLEECNHECKGEKGSVCGAVDRLSVYRVDELQPGS
RKRRTATYRGCFRLPENITHAFPSSLIQANVTVGTCSGFCSQKVYRVSWPPPDNTMCSEH
HDDLHLHIKGLSSAHSSQHGQRYLRHRWAAVCRGHPGCLFLLLPVMKVLVWNEEFPLAIL
RGWECYCAYPTPRFNLRDAMDSSVCGQDPEAQRLAEYCEVYQTPVQDTRCTDRRFLPNKS
KVFVALSSFPGAGNTWARHLIEHATGFYTGSYYFDGTLYNKGFKGEKDHWRSRRTICVKT
HESGRREIEMFDSAILLIRNPYRSLVAEFNRKCAGHLGYAADRNWKSKEWPDFVNSYASW
WSSHVLDWLKYGKRLLVVHYEELRRSLVPTLREMVAFLNVSVSEERLLCVENNKEGSFRR
RGRRSHDPEPFTPEMKDLINGYIRTVDQALRDHNWTGLPREYVPR

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_4|1938_bp
atggccaaacctttcttccgactccagaagtttctccgccgaacacagttcctgctgttc
ttcctcacggctgcctacctgatgaccggcagcctgctgctgctgcagcgggtccgcgtg
gctctcccacagggcccccgggcacccggccccctgcagaccttgccagtggccgccgtg
gcgctgggcgtgggcttgctggacagcagagccctgcacgaccctcgagtcagcccagag
ctgctgctgggtgtggacatgctgcagagccccctgacccggccccggcccggcccccgc
tggctccggagccgcaactcggagctgcgtcagttgcgtcgccgctggttccaccacttc
atgagtgactcccagggaccgcccgccctgggccccgaggctgccaggcccgccatccac
agccgaggcacctacattggatgcttcagtgacgatggccacgagaggactctgaaagga
gctgtgttttatgacttgagaaagatgactgtctcccactgccaggatgcgtgtgctgag
cggtcctatgtctacgccggcttggaggccggggcggagtgttactgcgggaaccggctg
ccagcggtgagcgtggggctggaagagtgtaaccatgagtgcaaaggcgagaagggctct
gtgtgcggggctgtggaccggctctccgtgtaccgtgtggacgagctgcagccgggctcc
aggaagcggcggaccgccacctaccgcggatgcttccgactgccagagaacatcacacat
gccttccccagctccctgatacaggccaatgtgaccgtggggacttgctcgggcttttgt
tcccagaaagtgtaccgagtgtcatggccacctccagataacaccatgtgttcagaacat
catgatgacctgcatttgcatattaaaggactaagttcagcccatagcagccagcatgga
cagaggtacctgagacacagatgggccgccgtgtgccgtggacatccgggctgcttgttt
ctgctgctccctgtgatgaaggtgttggtgtggaatgaggagttccccttggccattctc
aggggctgggaatgctactgtgcttaccctaccccccggttcaacctgcgggatgccatg
gacagctcagtatgtggccaggaccctgaggcacagaggctggcagaatactgtgaggtc
taccagacacctgtgcaagacactcgttgtacagacaggaggttcctgcctaacaaatcc
aaagtgtttgtggctttgtcaagcttcccaggagccgggaacacatgggcacggcacctc
attgagcatgccactggcttctatacagggagctactactttgatggaaccctctacaac
aaagggttcaagggcgaaaaggaccactggcggagccgacgcaccatctgtgtcaaaacc
cacgagagtggcaggagggagattgagatgtttgattcagccatcctgctaatccggaac
ccatacaggtccctggtggcagaattcaacagaaaatgtgccgggcacctgggatatgca
gctgaccgcaactggaagagcaaagagtggccggactttgtcaacagctacgcctcgtgg
tggtcctcgcacgtcctggactggctcaagtacgggaagcggctgctggtggtgcactac
gaggagctgcggcgcagcctggtgcccacgttacgggagatggtggccttcctcaacgtg
tctgtgagcgaggagcggctgctctgcgtggagaacaacaaggagggcagcttccggcgg
cgcggccggcgctcccacgaccctgagcccttcaccccggagatgaaagacttgatcaat
ggctacatccggacggtggaccaagccctgcgtgaccacaactggacggggctgcccagg
gagtatgtgcccagatga

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_5|86_aa
MAQAPLALCTLATVALLMAMKMQTWNFTEVTTTGNQFWEQKGSRQSLESKLRQSKYKRRK
RRRIIVLQAASSVEELSLHPLDDSHQ

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_5|261_bp
atggcccaggccccactggctctctgcacccttgccacggttgccctcctaatggctatg
aagatgcaaacttggaactttactgaggtgaccacaacaggcaaccaattctgggaacag
aagggcagcaggcagtctttggagagcaagctgaggcaatcgaagtataagagaaggaaa
aggaggaggattatcgtcctgcaagccgcctcctccgtggaggagctctcacttcaccct
ttggacgacagccaccaatga

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_6|204_aa
MVEGKEEQVTSYMDGSRPAGRGLCATPHSIPISWLKEAKRSGRGESRYSRHGSSNHSKPE
KREATRQAWIIPSLSTNLPTHLHLYPHSERCELAHVPVPVAVAATKKHIKIQPDFGLELL
GARTSSEEHLGQVMLSQVPAVCELEKRLPVSADVDGAAQNGHFIPSSEAPSCYSCKAKSQ
GHFLSDEDPLPDPVAGQLYNSAYS

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_6|615_bp
atggtggaaggcaaggaggagcaagtcacctcttacatggatggcagcagacctgctgga
cgtggcctgtgtgctacaccccacagtatccccatctcctggctgaaggaagcaaagagg
agtggtcggggtgagagccgctacagccgccacggcagcagcaaccacagcaaaccagag
aaaagagaagcaaccagacaagcctggatcatcccctctctctccacaaatcttccgact
cacctgcatctatacccacattctgaaagatgtgaattggcccatgtccctgtgcctgtg
gctgtggcagccacgaagaaacacattaaaatccagcctgactttggacttgagcttttg
ggtgctagaacatcttcagaagagcacctggggcaggtaatgctgtctcaggtccctgct
gtgtgtgaactggagaagcggcttccagtttctgctgacgtagatggtgctgctcagaat
ggccacttcatcccctcttctgaggccccttcctgttattcatgcaaagcaaaaagccag
ggtcacttccttagtgacgaggacccactgccagacccagtggcagggcagctatacaac
tctgcatattcataa

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_7|287_aa
MGLASLQRHQRMSWCSPWIGSILATITITITNSITTTSFATISITTTSITTTPITITPIT
TTPITITTTPITITPIITTPITTTTITTTSITTTPITTTTSITTTSITTTTTTSITTTSI
TTTPITTTTITTTSITTTPITTTTSTTTTSITTTSITITTISITTTPITTTTTTSISTTP
ITTISITTTSITITTTSITTTSITTTSITTTSITTTSITTTSITTTSNNTTSISSCLAEA
IFFLALNFCHGPIKDENRNFSPPGSVGTSFLPLSLPPRSFLPRGEVS

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_7|864_bp
atgggactggccagcctgcaaagacaccagaggatgtcttggtgtagcccgtggatagga
agcatccttgccaccatcaccatcaccatcaccaactccatcaccaccacctccttcgcc
accatctccatcaccaccacctccatcaccaccacccccatcaccatcacccccatcacc
accacccccatcaccatcaccaccacccccatcaccatcacccccatcatcaccaccccc
atcaccaccaccaccatcaccaccacctccatcaccaccacccccatcaccaccaccacc
tccatcaccaccacctccatcaccaccaccaccaccacctccatcaccaccacctccatc
accaccacccccatcaccaccaccaccatcaccaccacctccatcaccaccacccccatc
accaccaccacctccaccaccaccacctccatcaccaccacctccatcaccatcaccacc
atctccatcaccaccacccccatcaccaccaccaccaccacctccatcagcaccaccccc
atcaccaccatctccatcaccaccacctccatcaccatcaccaccacctccatcaccacc
acctccatcaccaccacctccatcaccaccacctccatcaccaccacctccatcaccacc
acctccatcaccaccacctccaacaacaccacctccatcagctcctgtctagcagaagcc
attttctttcttgccctaaatttctgccatggccccattaaagatgaaaataggaatttc
agccctcctggaagtgtgggcacatcgtttttacccttgtctctaccccctcgctcattc
ctccctaggggagaagtgtcttga

>gi568815581f:5980659_6220658|GENSCAN_predicted_peptide_8|61_aa
MENDRGDFAPETGALKTPSILSYSLDPWTTLFPELSKAWCCNVSLILDGTGKRLVTTILY
S

>gi568815581f:5980659_6220658|GENSCAN_predicted_CDS_8|186_bp
atggaaaatgaccggggtgactttgctcctgaaactggagccctgaaaacaccgtccatt
ctctcctactcactggatccttggacaactctctttcccgagctttccaaagcctggtgc
tgcaatgtatctttaattctagacggcactggcaaacgcttagttaccaccatcctatat
tcataa