Result of FASTA (omim) for pF1KA0459
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0459, 398 aa
  1>>>pF1KA0459 398 - 398 aa - 398 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0574+/-0.000368; mu= 8.7979+/- 0.023
 mean_var=117.0512+/-22.719, 0's: 0 Z-trim(116.4): 48  B-trim: 0 in 0/50
 Lambda= 0.118546
 statistics sampled from 27572 (27620) to 27572 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.324), width:  16
 Scan time:  8.410

The best scores are:                                      opt bits E(85289)
NP_056022 (OMIM: 611758) OTU domain-containing pro ( 398) 2641 462.7 7.1e-130
XP_005245849 (OMIM: 611758) PREDICTED: OTU domain- ( 465) 2554 447.8 2.4e-125
XP_005245850 (OMIM: 611758) PREDICTED: OTU domain- ( 384) 1852 327.7 2.9e-89
XP_005245851 (OMIM: 611758) PREDICTED: OTU domain- ( 245) 1555 276.8 3.8e-74
XP_005263136 (OMIM: 611744) PREDICTED: OTU domain- (1114)  247 53.5   3e-06
XP_011530343 (OMIM: 611744) PREDICTED: OTU domain- (1120)  221 49.0 6.6e-05
XP_011530342 (OMIM: 611744) PREDICTED: OTU domain- (1121)  221 49.0 6.6e-05
NP_001311222 (OMIM: 300776,300884) putative bifunc ( 896)  200 45.4 0.00066
XP_016885339 (OMIM: 300776,300884) PREDICTED: puta ( 925)  200 45.4 0.00067
XP_016885338 (OMIM: 300776,300884) PREDICTED: puta ( 939)  200 45.4 0.00068
NP_001244166 (OMIM: 300776,300884) putative bifunc ( 954)  200 45.4 0.00069
NP_001244159 (OMIM: 300776,300884) putative bifunc ( 954)  200 45.4 0.00069
NP_001244163 (OMIM: 300776,300884) putative bifunc ( 954)  200 45.4 0.00069
XP_011529336 (OMIM: 300776,300884) PREDICTED: puta ( 958)  200 45.4 0.00069
XP_016885337 (OMIM: 300776,300884) PREDICTED: puta (1050)  200 45.4 0.00075
XP_011529334 (OMIM: 300776,300884) PREDICTED: puta (1057)  200 45.4 0.00075
XP_006724760 (OMIM: 300776,300884) PREDICTED: puta (1057)  200 45.4 0.00075
XP_006724761 (OMIM: 300776,300884) PREDICTED: puta (1057)  200 45.4 0.00075
XP_011529333 (OMIM: 300776,300884) PREDICTED: puta (1057)  200 45.4 0.00075
XP_011529335 (OMIM: 300776,300884) PREDICTED: puta (1057)  200 45.4 0.00075
NP_001311221 (OMIM: 300776,300884) putative bifunc (1058)  200 45.4 0.00075
NP_001244160 (OMIM: 300776,300884) putative bifunc (1059)  200 45.4 0.00075
XP_011529332 (OMIM: 300776,300884) PREDICTED: puta (1082)  200 45.4 0.00077
XP_006724756 (OMIM: 300776,300884) PREDICTED: puta (1124)  200 45.5 0.00079
NP_001093392 (OMIM: 300776,300884) putative bifunc (1137)  200 45.5  0.0008
XP_016885336 (OMIM: 300776,300884) PREDICTED: puta (1148)  200 45.5 0.00081
XP_016885335 (OMIM: 300776,300884) PREDICTED: puta (1153)  200 45.5 0.00081
XP_011529330 (OMIM: 300776,300884) PREDICTED: puta (1161)  200 45.5 0.00081
NP_001129629 (OMIM: 300713) OTU domain-containing  ( 566)  191 43.8  0.0013
NP_001129630 (OMIM: 300713) OTU domain-containing  ( 566)  191 43.8  0.0013
XP_016885117 (OMIM: 300713) PREDICTED: OTU domain- ( 567)  191 43.8  0.0013
XP_005272679 (OMIM: 300713) PREDICTED: OTU domain- ( 567)  191 43.8  0.0013
NP_001129631 (OMIM: 300713) OTU domain-containing  ( 349)  179 41.6  0.0036
XP_006724600 (OMIM: 300713) PREDICTED: OTU domain- ( 571)  181 42.0  0.0043
NP_060072 (OMIM: 300713) OTU domain-containing pro ( 571)  181 42.0  0.0043
XP_005278096 (OMIM: 300713) PREDICTED: OTU domain- ( 572)  181 42.0  0.0043
XP_011542234 (OMIM: 300713) PREDICTED: OTU domain- ( 572)  181 42.0  0.0043
NP_001138845 (OMIM: 612022) OTU domain-containing  ( 481)  179 41.7  0.0047
NP_057107 (OMIM: 612021) OTU domain-containing pro ( 323)  172 40.4  0.0077


>>NP_056022 (OMIM: 611758) OTU domain-containing protein  (398 aa)
 initn: 2641 init1: 2641 opt: 2641  Z-score: 2452.7  bits: 462.7 E(85289): 7.1e-130
Smith-Waterman score: 2641; 100.0% identity (100.0% similar) in 398 aa overlap (1-398:1-398)

               10        20        30        40        50        60
pF1KA0 MSRKQAAKSRPGSGSRKAEAERKRDERAARRALAKERRNRPESGGGGGCEEEFVSFANQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MSRKQAAKSRPGSGSRKAEAERKRDERAARRALAKERRNRPESGGGGGCEEEFVSFANQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 QALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 EKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRYG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EHYDSVRRINDNSEAPAHLQTDFQMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EHYDSVRRINDNSEAPAHLQTDFQMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 NATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 GGSGARIFGNQGLNEGRTENNKAQASPSEENKANKNQLAKVTNKQRREQQWMEKKKRQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GGSGARIFGNQGLNEGRTENNKAQASPSEENKANKNQLAKVTNKQRREQQWMEKKKRQEE
              310       320       330       340       350       360

              370       380       390        
pF1KA0 RHRHKALESRGSHRDNNRSEAEANTQVTLVKTFAALNI
       ::::::::::::::::::::::::::::::::::::::
NP_056 RHRHKALESRGSHRDNNRSEAEANTQVTLVKTFAALNI
              370       380       390        

>>XP_005245849 (OMIM: 611758) PREDICTED: OTU domain-cont  (465 aa)
 initn: 1591 init1: 1591 opt: 2554  Z-score: 2371.3  bits: 447.8 E(85289): 2.4e-125
Smith-Waterman score: 2554; 98.0% identity (98.0% similar) in 398 aa overlap (1-398:76-465)

                                             10        20        30
pF1KA0                               MSRKQAAKSRPGSGSRKAEAERKRDERAAR
                                     ::::::::::::::::::::::::::::::
XP_005 PRCFTFPTLEADAGGSCAFPSCRWGLQAKAMSRKQAAKSRPGSGSRKAEAERKRDERAAR
          50        60        70        80        90       100     

               40        50        60        70        80        90
pF1KA0 RALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSR
         110       120       130       140       150       160     

              100       110       120       130       140       150
pF1KA0 NHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNV
         170       180       190       200       210       220     

              160       170       180       190       200       210
pF1KA0 VIHQLNAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDFQMLHQDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VIHQLNAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDFQMLHQDE
         230       240       250       260       270       280     

              220       230       240       250       260       270
pF1KA0 SNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLIVQNLEAENYNIESAIIAVL
       ::::::::::::::::::::::::::::        ::::::::::::::::::::::::
XP_005 SNKREKIKTKGMDSEDDLRDEVEDAVQK--------DFNLIVQNLEAENYNIESAIIAVL
         290       300       310               320       330       

              280       290       300       310       320       330
pF1KA0 RMNQGKRNNAEENLEPSGRVLKQCGPLWEEGGSGARIFGNQGLNEGRTENNKAQASPSEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMNQGKRNNAEENLEPSGRVLKQCGPLWEEGGSGARIFGNQGLNEGRTENNKAQASPSEE
       340       350       360       370       380       390       

              340       350       360       370       380       390
pF1KA0 NKANKNQLAKVTNKQRREQQWMEKKKRQEERHRHKALESRGSHRDNNRSEAEANTQVTLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NKANKNQLAKVTNKQRREQQWMEKKKRQEERHRHKALESRGSHRDNNRSEAEANTQVTLV
       400       410       420       430       440       450       

               
pF1KA0 KTFAALNI
       ::::::::
XP_005 KTFAALNI
       460     

>>XP_005245850 (OMIM: 611758) PREDICTED: OTU domain-cont  (384 aa)
 initn: 1877 init1: 1852 opt: 1852  Z-score: 1723.6  bits: 327.7 E(85289): 2.9e-89
Smith-Waterman score: 1852; 98.6% identity (99.6% similar) in 282 aa overlap (1-282:76-357)

                                             10        20        30
pF1KA0                               MSRKQAAKSRPGSGSRKAEAERKRDERAAR
                                     ::::::::::::::::::::::::::::::
XP_005 PRCFTFPTLEADAGGSCAFPSCRWGLQAKAMSRKQAAKSRPGSGSRKAEAERKRDERAAR
          50        60        70        80        90       100     

               40        50        60        70        80        90
pF1KA0 RALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSR
         110       120       130       140       150       160     

              100       110       120       130       140       150
pF1KA0 NHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNV
         170       180       190       200       210       220     

              160       170       180       190       200       210
pF1KA0 VIHQLNAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDFQMLHQDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VIHQLNAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDFQMLHQDE
         230       240       250       260       270       280     

              220       230       240       250       260       270
pF1KA0 SNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLIVQNLEAENYNIESAIIAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLIVQNLEAENYNIESAIIAVL
         290       300       310       320       330       340     

              280       290       300       310       320       330
pF1KA0 RMNQGKRNNAEENLEPSGRVLKQCGPLWEEGGSGARIFGNQGLNEGRTENNKAQASPSEE
       ::::::::. ..                                                
XP_005 RMNQGKRNSHKQTEARTAVDGEEEAAGGEAPPQSPGEQR                     
         350       360       370       380                         

>>XP_005245851 (OMIM: 611758) PREDICTED: OTU domain-cont  (245 aa)
 initn: 1555 init1: 1555 opt: 1555  Z-score: 1452.1  bits: 276.8 E(85289): 3.8e-74
Smith-Waterman score: 1555; 100.0% identity (100.0% similar) in 237 aa overlap (162-398:9-245)

             140       150       160       170       180       190 
pF1KA0 TFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRIND
                                     ::::::::::::::::::::::::::::::
XP_005                       MTFLLRSMIRGTEKSSVRELHIAYRYGEHYDSVRRIND
                                     10        20        30        

             200       210       220       230       240       250 
pF1KA0 NSEAPAHLQTDFQMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSEAPAHLQTDFQMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLI
       40        50        60        70        80        90        

             260       270       280       290       300       310 
pF1KA0 VQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWEEGGSGARIFGNQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWEEGGSGARIFGNQ
      100       110       120       130       140       150        

             320       330       340       350       360       370 
pF1KA0 GLNEGRTENNKAQASPSEENKANKNQLAKVTNKQRREQQWMEKKKRQEERHRHKALESRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLNEGRTENNKAQASPSEENKANKNQLAKVTNKQRREQQWMEKKKRQEERHRHKALESRG
      160       170       180       190       200       210        

             380       390        
pF1KA0 SHRDNNRSEAEANTQVTLVKTFAALNI
       :::::::::::::::::::::::::::
XP_005 SHRDNNRSEAEANTQVTLVKTFAALNI
      220       230       240     

>>XP_005263136 (OMIM: 611744) PREDICTED: OTU domain-cont  (1114 aa)
 initn: 195 init1: 165 opt: 247  Z-score: 233.2  bits: 53.5 E(85289): 3e-06
Smith-Waterman score: 247; 28.6% identity (60.5% similar) in 220 aa overlap (41-249:8-221)

               20        30        40          50        60        
pF1KA0 PGSGSRKAEAERKRDERAARRALAKERRNRPESG--GGGGCEEEFVSFANQLQALGLKLR
                                     :..:  ::.: .:. . .   :. :::  .
XP_005                        MEAAVGVPDGGDQGGAGPREDATPMDAYLRKLGLYRK
                                      10        20        30       

       70        80         90       100       110       120       
pF1KA0 EVPGDGNCLFRALGDQ-LEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASL
        :  ::.:::::...: :...:: :.. :.  . :. ..:: :: :.: .  ::...  :
XP_005 LVAKDGSCLFRAVAEQVLHSQSR-HVEVRMACIHYLRENREKFEAFIEGS--FEEYLKRL
        40        50        60         70        80          90    

       130       140       150        160       170       180      
pF1KA0 AKPGTFAGNDAIVAFARNHQLNVVIHQL-NAPLWQIRGTEKSSVRELHIAYRYGEHYDSV
        .:  ..:.  : :..  .. . .:..  :.   :.  ::..  ... . .  :.::: :
XP_005 ENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQV--TENNFPEKVLLCFSNGNHYDIV
          100       110       120       130         140       150  

        190       200       210           220       230       240  
pF1KA0 RRINDNSEAPAHLQTDFQMLHQDESNKRE--KI--KTKGMDSEDDLRDEVEDAVQKVCN-
         :.  .:. :  :. .  :  ..  : .  ::  .   ..  :.  .:. :. .  :. 
XP_005 YPIK-YKESSAMCQSLLYELLYEKVFKTDVSKIVMELDTLEVADEDNSEISDSEDDSCKS
             160       170       180       190       200       210 

               250       260       270       280       290         
pF1KA0 --ATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWE
         :.. .: :                                                  
XP_005 KTAAAAADVNGFKPLSGNEQLKNNGNSTSLPLSRKVLKSLNPAVYRNVEYEIWLKSKQAQ
             220       230       240       250       260       270 

>>XP_011530343 (OMIM: 611744) PREDICTED: OTU domain-cont  (1120 aa)
 initn: 178 init1: 148 opt: 221  Z-score: 209.1  bits: 49.0 E(85289): 6.6e-05
Smith-Waterman score: 223; 27.8% identity (58.6% similar) in 227 aa overlap (41-249:8-228)

               20        30        40          50        60        
pF1KA0 PGSGSRKAEAERKRDERAARRALAKERRNRPESG--GGGGCEEEFVSFANQLQALGLKLR
                                     :..:  ::.: .:. . .   :. :::  .
XP_011                        MEAAVGVPDGGDQGGAGPREDATPMDAYLRKLGLYRK
                                      10        20        30       

       70        80         90       100       110              120
pF1KA0 EVPGDGNCLFRALGDQ-LEGHSRNHLKHRQETVDYMIKQREDFEP-------FVEDDIPF
        :  ::.:::::...: :...:: :.. :.  . :. ..:: ::        :.: .  :
XP_011 LVAKDGSCLFRAVAEQVLHSQSR-HVEVRMACIHYLRENREKFEAVTCNFKHFIEGS--F
        40        50        60         70        80        90      

              130       140       150        160       170         
pF1KA0 EKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQL-NAPLWQIRGTEKSSVRELHIAYRY
       :...  : .:  ..:.  : :..  .. . .:..  :.   :.  ::..  ... . .  
XP_011 EEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQV--TENNFPEKVLLCFSN
          100       110       120       130         140       150  

     180       190       200       210           220       230     
pF1KA0 GEHYDSVRRINDNSEAPAHLQTDFQMLHQDESNKRE--KI--KTKGMDSEDDLRDEVEDA
       :.::: :  :.  .:. :  :. .  :  ..  : .  ::  .   ..  :.  .:. :.
XP_011 GNHYDIVYPIK-YKESSAMCQSLLYELLYEKVFKTDVSKIVMELDTLEVADEDNSEISDS
            160        170       180       190       200       210 

         240          250       260       270       280       290  
pF1KA0 VQKVCN---ATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLK
        .  :.   :.. .: :                                           
XP_011 EDDSCKSKTAAAAADVNGFKPLSGNELKNNGNSTSLPLSRKVLKSLNPAVYRNVEYEIWL
             220       230       240       250       260       270 

>>XP_011530342 (OMIM: 611744) PREDICTED: OTU domain-cont  (1121 aa)
 initn: 178 init1: 148 opt: 221  Z-score: 209.1  bits: 49.0 E(85289): 6.6e-05
Smith-Waterman score: 223; 27.8% identity (58.6% similar) in 227 aa overlap (41-249:8-228)

               20        30        40          50        60        
pF1KA0 PGSGSRKAEAERKRDERAARRALAKERRNRPESG--GGGGCEEEFVSFANQLQALGLKLR
                                     :..:  ::.: .:. . .   :. :::  .
XP_011                        MEAAVGVPDGGDQGGAGPREDATPMDAYLRKLGLYRK
                                      10        20        30       

       70        80         90       100       110              120
pF1KA0 EVPGDGNCLFRALGDQ-LEGHSRNHLKHRQETVDYMIKQREDFEP-------FVEDDIPF
        :  ::.:::::...: :...:: :.. :.  . :. ..:: ::        :.: .  :
XP_011 LVAKDGSCLFRAVAEQVLHSQSR-HVEVRMACIHYLRENREKFEAVTCNFKHFIEGS--F
        40        50        60         70        80        90      

              130       140       150        160       170         
pF1KA0 EKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQL-NAPLWQIRGTEKSSVRELHIAYRY
       :...  : .:  ..:.  : :..  .. . .:..  :.   :.  ::..  ... . .  
XP_011 EEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQV--TENNFPEKVLLCFSN
          100       110       120       130         140       150  

     180       190       200       210           220       230     
pF1KA0 GEHYDSVRRINDNSEAPAHLQTDFQMLHQDESNKRE--KI--KTKGMDSEDDLRDEVEDA
       :.::: :  :.  .:. :  :. .  :  ..  : .  ::  .   ..  :.  .:. :.
XP_011 GNHYDIVYPIK-YKESSAMCQSLLYELLYEKVFKTDVSKIVMELDTLEVADEDNSEISDS
            160        170       180       190       200       210 

         240          250       260       270       280       290  
pF1KA0 VQKVCN---ATGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLK
        .  :.   :.. .: :                                           
XP_011 EDDSCKSKTAAAAADVNGFKPLSGNEQLKNNGNSTSLPLSRKVLKSLNPAVYRNVEYEIW
             220       230       240       250       260       270 

>>NP_001311222 (OMIM: 300776,300884) putative bifunction  (896 aa)
 initn: 134 init1: 134 opt: 200  Z-score: 191.2  bits: 45.4 E(85289): 0.00066
Smith-Waterman score: 200; 28.2% identity (62.2% similar) in 156 aa overlap (55-209:117-268)

           30        40        50        60        70        80    
pF1KA0 DERAARRALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQ
                                     :. . : .:::  . .  :..:::::...:
NP_001 AFFPLPLTPTLYKMHKGWKNYCSQKSLNEASMDEYLGSLGLFRKLTAKDASCLFRAISEQ
         90       100       110       120       130       140      

           90       100       110       120       130       140    
pF1KA0 LEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFAR
       :   . .::. :.  :.:: .... :: .:: .  :::..  :. :   ::.  : :.. 
NP_001 LFCSQVHHLEIRKACVSYMRENQQTFESYVEGS--FEKYLERLGDPKESAGQLEIRALSL
        150       160       170         180       190       200    

          150        160       170       180       190       200   
pF1KA0 NHQLNVVIHQL-NAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDF
        .. . ..... . :   .  :...   .. . :  . :::::   . .: : .   . .
NP_001 IYNRDFILYRFPGKPPTYV--TDNGYEDKILLCYSSSGHYDSVYSKQFQSSAAVCQAVLY
          210       220         230       240       250       260  

           210       220       230       240       250       260   
pF1KA0 QMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLIVQNLEAENYNIE
       ..:..:                                                      
NP_001 EILYKDVFVVDEEELKTAIKLFRSGSKKNRNNAVTGSEDAHTDYKSSNQNRMEEWGACYN
            270       280       290       300       310       320  

>>XP_016885339 (OMIM: 300776,300884) PREDICTED: putative  (925 aa)
 initn: 134 init1: 134 opt: 200  Z-score: 191.0  bits: 45.4 E(85289): 0.00067
Smith-Waterman score: 200; 28.2% identity (62.2% similar) in 156 aa overlap (55-209:221-372)

           30        40        50        60        70        80    
pF1KA0 DERAARRALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQ
                                     :. . : .:::  . .  :..:::::...:
XP_016 AFFPLPLTPTLYKMHKGWKNYCSQKSLNEASMDEYLGSLGLFRKLTAKDASCLFRAISEQ
              200       210       220       230       240       250

           90       100       110       120       130       140    
pF1KA0 LEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFAR
       :   . .::. :.  :.:: .... :: .:: .  :::..  :. :   ::.  : :.. 
XP_016 LFCSQVHHLEIRKACVSYMRENQQTFESYVEGS--FEKYLERLGDPKESAGQLEIRALSL
              260       270       280         290       300        

          150        160       170       180       190       200   
pF1KA0 NHQLNVVIHQL-NAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDF
        .. . ..... . :   .  :...   .. . :  . :::::   . .: : .   . .
XP_016 IYNRDFILYRFPGKPPTYV--TDNGYEDKILLCYSSSGHYDSVYSKQFQSSAAVCQAVLY
      310       320         330       340       350       360      

           210       220       230       240       250       260   
pF1KA0 QMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLIVQNLEAENYNIE
       ..:..:                                                      
XP_016 EILYKDVFVVDEEELKTAIKLFRSGSKKNRNNAVTGSEDAHTDYKSSNQNRMEEWGACYN
        370       380       390       400       410       420      

>>XP_016885338 (OMIM: 300776,300884) PREDICTED: putative  (939 aa)
 initn: 134 init1: 134 opt: 200  Z-score: 190.9  bits: 45.4 E(85289): 0.00068
Smith-Waterman score: 200; 28.2% identity (62.2% similar) in 156 aa overlap (55-209:221-372)

           30        40        50        60        70        80    
pF1KA0 DERAARRALAKERRNRPESGGGGGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQ
                                     :. . : .:::  . .  :..:::::...:
XP_016 AFFPLPLTPTLYKMHKGWKNYCSQKSLNEASMDEYLGSLGLFRKLTAKDASCLFRAISEQ
              200       210       220       230       240       250

           90       100       110       120       130       140    
pF1KA0 LEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFAR
       :   . .::. :.  :.:: .... :: .:: .  :::..  :. :   ::.  : :.. 
XP_016 LFCSQVHHLEIRKACVSYMRENQQTFESYVEGS--FEKYLERLGDPKESAGQLEIRALSL
              260       270       280         290       300        

          150        160       170       180       190       200   
pF1KA0 NHQLNVVIHQL-NAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDNSEAPAHLQTDF
        .. . ..... . :   .  :...   .. . :  . :::::   . .: : .   . .
XP_016 IYNRDFILYRFPGKPPTYV--TDNGYEDKILLCYSSSGHYDSVYSKQFQSSAAVCQAVLY
      310       320         330       340       350       360      

           210       220       230       240       250       260   
pF1KA0 QMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNATGCSDFNLIVQNLEAENYNIE
       ..:..:                                                      
XP_016 EILYKDVFVVDEEELKTAIKLFRSGSKKNRNNAVTGSEDAHTDYKSSNQNRMEEWGACYN
        370       380       390       400       410       420      




398 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 19:00:01 2016 done: Wed Nov  2 19:00:02 2016
 Total Scan time:  8.410 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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