GENSCAN 1.0	Date run:  2-Nov-116	Time: 18:10:32

Sequence gi568815575r:119529318_119775669 : 246352 bp : 46.04% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    328    323    6                               1.05
 1.07 Term -  10472  10410   63  2  0  106   41    66 0.780   1.59
 1.06 Intr -  12103  12011   93  1  0   95  105   148 0.998  17.36
 1.05 Intr -  13277  13188   90  2  0  109   87   180 0.996  20.19
 1.04 Intr -  15174  15036  139  2  1   68   86    99 0.998   8.17
 1.03 Intr -  16187  16146   42  1  0   90  106    46 0.939   3.96
 1.02 Intr -  31068  30951  118  1  1  100   94   129 0.874  14.22
 1.01 Init -  36038  35915  124  2  1   93   92   109 0.997  12.13
 1.00 Prom -  39964  39925   40                              -5.96

 2.20 PlyA -  40710  40705    6                               1.05
 2.19 Term -  42986  42916   71  0  2  114   50    32 0.076   0.10
 2.18 Intr -  47454  47419   36  1  0  125   98    11 0.126   4.03
 2.17 Intr -  61917  60169 1749  1  0   56   89  1194 0.498 103.62
 2.16 Intr -  63196  63066  131  0  2   43  101    73 0.130   4.44
 2.15 Intr -  76718  76414  305  2  2   14   94   248 0.204  13.39
 2.14 Intr -  77213  77084  130  1  1   75   77   110 0.365   9.30
 2.13 Intr - 100191 100001  191  0  2   69  106   313 0.942  29.58
 2.12 Intr - 104175 104043  133  2  1  -19   84   145 0.466   4.05
 2.11 Intr - 107878 107710  169  2  1   52   86   385 0.679  33.70
 2.10 Intr - 111471 111375   97  0  1  104   96   104 0.621  12.38
 2.09 Intr - 119331 119275   57  0  0   68   86    39 0.623   0.78
 2.08 Intr - 120781 120620  162  1  0  143   92   273 0.999  33.37
 2.07 Intr - 123723 123537  187  2  1  117   75   245 0.999  25.79
 2.06 Intr - 134360 134165  196  0  1   93  103   179 0.971  18.37
 2.05 Intr - 146351 146237  115  2  1   66   92   104 0.924   8.62
 2.04 Intr - 158772 158732   41  1  2   85   53    24 0.009  -3.46
 2.03 Intr - 163465 163316  150  2  0   54   20   136 0.077   3.53
 2.02 Intr - 163885 163759  127  1  1   36  103   102 0.425   6.75
 2.01 Init - 166266 166207   60  0  0   57  131    12 0.363   3.70
 2.00 Prom - 181023 180984   40                              -4.76

 3.00 Prom + 181685 181724   40                              -3.66
 3.01 Init + 211827 211833    7  2  1   99   83     0 0.380   1.69
 3.02 Intr + 221419 221694  276  2  0   75   68   144 0.593   8.59
 3.03 Term + 221787 221917  131  1  2   37   55    89 0.640  -1.16
 3.04 PlyA + 224636 224641    6                               1.05

 4.00 Prom + 226372 226411   40                              -7.06
 4.01 Sngl + 229351 230298  948  0  0   91   48  1042 0.987  95.08
 4.02 PlyA + 232248 232253    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 193366 193430   65  2  2  116   47    42 0.874   0.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:119529318_119775669|GENSCAN_predicted_peptide_1|222_aa
MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVID
AAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVV
KFGQGFGKTNIYTQKQEPPKKVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQ
NAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLIDNQFK

>gi568815575r:119529318_119775669|GENSCAN_predicted_CDS_1|669_bp
atgccgaaagtagtgtctcggtcagtagtctgctctgacactcgggaccgggaggaatat
gacgacggcgagaagcccctccatgtttactactgtttgtgcggccagatggtcctagtg
ctggactgccagttagagaaattgcccatgaggccccgggaccggtcccgtgtgattgat
gctgccaaacatgcccataagttttgtaacacagaagatgaggagactatgtatctgcgg
agacctgaaggcattgaacgacagtacaggaagaaatgtgcaaagtgtggactgccgctc
ttctaccaatcccagccaaagaatgctcctgttaccttcattgtggatggagcagtagtc
aagtttggccagggctttgggaaaacgaacatatatactcagaaacaagagcctcctaag
aaggtgatgatgaccaaacggaccaaagacatgggcaagttcagttctgtcaccgtgtct
accattgatgaagaggaagaggagattgaggctagggaagttgctgactcatatgcacag
aatgccaaagtgattgaaaaacagctggagcgcaaaggcatgagcaagaggcgactgcaa
gagctggctgaattggaagccaagaaagcgaaaatgaaggggaccttgattgacaaccag
ttcaaataa

>gi568815575r:119529318_119775669|GENSCAN_predicted_peptide_2|1368_aa
MGHMDETPRIPCSGAPSAGPCNTFSLSEELLCFLCSSSRCGGTRGSPGGRRSDGSDRYSS
PGAAAPRLGRCRMNGRRSRRALRVPGTLALPRPCARLPVVTRDRTGKEARGWAHIHWALI
GQAPCQGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFN
TKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDA
QFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIA
KADAISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAEINGTMNYTRDVFVITITILD
KSGSRAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIRVNMED
LREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQM
FVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAEL
LQSQGSQAGGSQTLKRDKEKKNASKARSRHWREKSTSREILRRDLEVREQPRRKRTGLTT
PDGTRSASSLGSLLGGGEDGWRTSAVGGRLPVAPPLPPLPPPPLPPLPPPPPEPVLEQWR
YSHESDWQWALRRSFICRHLHSYPGAALDQLLALSAAWTNHVFLGCRYSPRLMEKILQMA
EGIDIGEMPSYDLVLSKPSKGQKRHLSTCDASSSKDERQEDPYGPQTKEVNEQTHFASMP
RDIYQDYTQDSFSIQDGNSQYCDSSGFILTKDQPVTANMYFDSGNPAPSTTSQQANSQST
PEPSPSQTFPESVVAEKQYFIEKLTATIWKNLSNPEMTSGSDKINYTYMLTRCIQACKTN
PEYIYAPLKEIPPADIPKNKKLLTDGYACEVRCQNIYLTTGYAGSKNGSRDRATELAVKL
LQKRIEVRVVRRKFKHTFGEDLVVCQIGMSSYEFPPALKPPEDLVVLGKDASGQPIFNAS
AKHWTNFVITENANDAIGILNNSASFNKMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGT
KKTSKHAAADEALKILQKTQPTYPSVKSSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVC
TLNDTAQFNRMTVEYVYERMTGLRWKCKVILESEVIAEAVGVKKTVKYEAAGEAVKTLKK
TQPTVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSG
EGIREPISVKEQHKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDER
KQIHQIAQKYGLKTLKSNDIYPGGKDFGIICIIKVSGFGAFRILDFQI

>gi568815575r:119529318_119775669|GENSCAN_predicted_CDS_2|4107_bp
atggggcatatggatgagacaccaaggattccgtgctcaggtgcccccagcgctgggccg
tgtaacactttctctttgtcggaggagctcctctgtttcctgtgcagtagctcccgttgc
ggcggcacccgtggcagccctggcggacgcaggagcgatggcagcgaccgatatagctcg
ccaggtgctgcggccccacggctggggcgttgccgaatgaatggccgtaggagccgccga
gccctccgggtccctggcaccctggccttgccgcgcccctgcgcacggctgcccgttgtg
acccgggaccgcacaggcaaagaggcgcggggctgggcacatattcactgggcactgatc
ggccaggccccgtgccagggtgaaggttgccgaactgtccccctggctggacatgtgggg
tttgacagcttgcctgaccagctggtgaataagtccgtcagccagggcttctgcttcaac
atcctgtgcgtgggagagacaggtttgggcaagtccaccctcatggacaccctgttcaac
accaaattcgaaggggagccagccacccacacacagccgggtgtccagctccagtctaat
acctatgacctccaagagagcaacgtgaggctaaagctcacgatcgttagcacagttggc
tttggggaccagatcaacaaagaggacagctacaagcctatcgtggaattcatcgatgca
caattcgaggcctacctgcaggaagagctaaagatccgaagagtgctacacacctaccat
gactcccgaatccatgtctgcttgtatttcattgcccccacgggtcattccctgaagtct
ctggacctagtgactatgaagaagctggacagtaaggtgaacatcatccccatcattgcc
aaagcagatgccatttcgaagagtgagctaacaaagttcaaaatcaaaatcaccagcgag
cttgtcagcaacggagtccagatctatcagtttcctacagatgatgagtcggtggcagag
atcaatggaaccatgaactacacccgagatgtgtttgttatcaccatcaccatcttagac
aaatctggctcaagggcccacctgccgtttgctgtcattggcagcacagaagaactgaag
ataggcaacaagatgatgagggcgcggcagtatccttggggcactgtgcaggttgaaaac
gaggcccactgcgactttgtgaagctgcgggagatgctgattcgggtcaacatggaggat
ctgcgggagcagacccacacccggcactatgagctgtatcgccgctgtaagctggaggag
atgggcttcaaggacaccgaccctgacagcaaacccttcagtttacaggagacatatgag
gccaaaaggaacgagttcctaggggaactccagaaaaaagaagaggagatgagacagatg
ttcgtccagcgagtcaaagagaaagaagcggagctcaaagaggcagagaaagagctgcac
gagaagtttgaccgtctgaagaaactgcaccaggacgagaagaagaaactggaggataag
aagaaatccctggatgatgaagtgaatgctttcaagcaaagaaagacggcggctgagctg
ctccagtcccagggctcccaggctggaggctcacagactctgaagagagacaaagagaag
aaaaatgcgtcaaaggcccgtagtcgtcactggagggaaaaaagtacgtcgcgcgagatt
ctgcgacgggatttggaagttagggaacagccgcggcgcaagcgcactggcctcacaacc
ccggacggcacgcggtcggcttcgtccctggggtccctgcttgggggcggagaagatggc
tggaggacgtctgctgttggggggcgacttcctgtcgcgccgccgctgccccccctcccg
ccgccgccgctgccgcccctcccgccgcccccgcccgagccagtgctggagcagtggcgc
tatagccacgaaagtgactggcagtgggctctgcggcgcagcttcatctgtcggcacctg
cacagctatcccggggctgccctcgaccagctcctcgcgctctccgccgcctggaccaac
cacgtcttcctgggctgcaggtacagcccacgcttgatggaaaaaattctccaaatggct
gaaggtattgatattggggagatgccttcatatgatctggtgctgtccaaaccttccaaa
ggtcaaaaacgccacctctcaacatgtgatgctagtagttcaaaagatgaaagacaggaa
gatccttatggccctcaaacaaaagaggtaaatgaacaaacacattttgccagcatgcca
agagacatctaccaagattatactcaagactctttcagtatacaagatgggaattctcag
tattgtgattcatcaggattcattctcacaaaagaccagcctgtaacagccaacatgtat
tttgacagtgggaaccctgccccaagcaccacatcacagcaggcaaactctcagtcaact
cctgagccttcaccatcacagacatttcccgagtctgtggtagccgagaagcagtatttt
attgaaaaattaacggcgacaatctggaagaacctttctaatccagaaatgacttctgga
tctgataaaattaattatacatatatgttaactcgttgtattcaggcgtgtaagacaaat
cctgagtatatatatgctcctttaaaggaaattcctcctgccgacatccccaaaaataaa
aaacttctaactgatggctatgcttgtgaagttagatgccaaaatatctacttaactaca
ggttatgctggcagcaagaatgggtccagggatcgagctacagagctagctgtaaaactc
ttgcagaaacgtattgaagttagagttgtccggcggaaattcaagcatacatttggagag
gacctcgtggtgtgtcagattggcatgtcctcctatgaatttcctccagctctgaagcca
ccagaagacctggtggtgctgggtaaagatgcttccgggcagccaatttttaatgcttct
gccaaacactggaccaattttgtcattacagaaaatgcaaatgatgcaattggtatcctt
aacaattctgcctcattcaacaagatgtcaattgaatacaaatatgagatgatgccaaat
cgcacatggcgttgtcgagtgtttttacaagatcactgcttagctgaaggttatggaacc
aagaaaacaagtaaacatgcagctgccgacgaggctttgaaaattcttcaaaaaacacag
cccacttatccatctgtcaaaagttcacaatgccatacaggctcttcacccagaggatct
ggaaagaagaaagatataaaggatcttgtagtttatgagaattcttcaaatcccgtgtgc
acgctgaacgacacagctcagtttaaccgaatgacagttgagtatgtctatgaaaggatg
acaggcctccgctggaaatgcaaagtgattctagagagtgaagtaattgcagaagcagtt
ggggtgaagaaaactgtcaaatatgaagctgctggggaagctgtgaaaaccctcaaaaag
acccagccaactgtcattaacaacttgaagaaaggagctgttgaagatgtgatttcaaga
aatgaaattcagggccgctcagcagaggaggcttacaaacagcaaatcaaagaagataat
attggaaatcagctgctgagaaagatgggttggactggtggtggtttaggtaaatctggt
gagggcatacgggagcctatctcagtgaaagagcagcataagcgggaagggcttggtctg
gatgtagagagggtgaataaaattgccaagagagatattgaacagatcatcagaaactac
gcccgctccgagagccacacagatttgactttctctagagagctgactaatgatgaacgg
aagcaaatacatcagattgcccagaagtatggtcttaagaccctgaagagtaatgatatt
tacccagggggtaaagattttggaattatttgcattataaaagtttcaggttttggagca
tttcggattttagattttcagatttga

>gi568815575r:119529318_119775669|GENSCAN_predicted_peptide_3|137_aa
MKHSGAQLASPSGSRTGAAGGAACQSRAVCLHFSALGRSMGLGAVEQGVVLVGEAGAAQE
PMEWVGGSGMAGCRSRALPRGKAAKAQREIQHSAGPAGCSECGARQAHAHPELQLARKRC
AQPRFLLAPLPPHLPAS

>gi568815575r:119529318_119775669|GENSCAN_predicted_CDS_3|414_bp
atgaaacactcaggagcccagctggcttcacctagtggatcccgcactggggccgcaggt
ggagctgcctgccagtcccgtgccgtgtgcttgcacttctcagcccttgggcggtcgatg
ggactgggcgccgtggagcagggggtggtgctcgtcggggaggctggggccgcacaggag
cccatggagtgggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgc
gggaaggcagctaaggcccagcgagaaatccagcacagcgccgggccggccggctgctcc
gagtgcggggcccgccaagcccacgcccacccagaactccagctggcccgcaagcgctgc
gcgcagccccggttcctgctcgcgcctctccctccacacctccctgcaagctga

>gi568815575r:119529318_119775669|GENSCAN_predicted_peptide_4|315_aa
MAQLGGAANRAPTASLAPTSQSLRCAPQPRPSRADTGSLGRYWGKAAAAASREHPFPGTL
MHSAAGSGRRRGALRELLGLQRAAPAGWLSEERAEELGGPSGPGSSRLCLEPREHAWILA
AAEGRYEVLRELLEAEPELLLRGDPITGYSVLHWLAKHGRHEELILVHDFALRRGLRLDV
SAPGSGGLTPLHLAALQGHDMVIKVLVGALGADATRRDHSGHRACHYLRPDAPWRLRELS
GAEEWEMESGSGCTNLNNNSSGTTAWRAASAVGATAVETSRRVAASRTKAKDTAGSRVAQ
MHSLFRHLFPSFQDR

>gi568815575r:119529318_119775669|GENSCAN_predicted_CDS_4|948_bp
atggcccagctcggaggggccgcgaaccgggcacccacggcctctctcgcgccgacctcg
cagagcctgcggtgcgccccgcagccccgcccctcgagagcggacactggtagcctgggc
aggtactggggcaaagccgcagccgccgcctcccgggagcaccccttcccaggcacgctg
atgcactctgcagcgggctcagggcgccggcggggagcgctgcgggaactgctggggctg
cagcgggcggctcctgcggggtggctgtcggaggagcgcgccgaggagctgggcgggccg
agtgggccgggcagcagcaggctgtgcctggaaccgcgggagcacgcgtggattctggca
gccgccgagggccgctatgaggtgctgcgggagctgctggaggctgagccggagctgctg
ctgcggggcgacccgatcaccggctactcggttctgcactggctggccaagcacgggcgc
cacgaggagctcattctggtacacgatttcgccctacgccgggggctgaggctcgacgtg
agcgccccaggcagcggcggcctcacgcccctccacctggcggcccttcagggccacgac
atggtcatcaaggtgctggtgggcgccctgggtgctgacgctacgcgccgcgaccacagc
ggccaccgggcctgccactacctgcggcccgacgcgccttggaggttgcgggagctgtcg
ggagccgaggaatgggagatggagagcggcagcgggtgcaccaacctgaacaacaacagc
agtggcaccactgcgtggagggccgcgagcgcagtgggcgcgacggctgtggagacaagc
aggagagtggcagcgtcgcggaccaaggcgaaggacaccgcgggcagccgggtggcgcaa
atgcatagccttttccgccatctgttcccctcattccaggaccgttga