GENSCAN 1.0	Date run:  2-Nov-116	Time: 17:53:47

Sequence gi568815576r:21823095_22046048 : 222954 bp : 48.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1585   1580    6                               1.05
 1.03 Term -  12496  12467   30  1  0  109   42    17 0.046  -2.95
 1.02 Intr -  20316  20287   30  0  0  111   81     8 0.060   0.73
 1.01 Init -  44346  44233  114  0  0  125   42   315 0.021  28.81
 1.00 Prom -  66486  66447   40                              -2.56

 2.09 PlyA -  68469  68464    6                               1.05
 2.08 Term - 100377  99998  380  1  2   95   43   459 0.946  37.05
 2.07 Intr - 102568 102475   94  1  1  116   89   102 0.973  12.64
 2.06 Intr - 108197 108054  144  2  0  129  110    29 0.854   9.68
 2.05 Intr - 110485 110297  189  1  0   76   78   287 0.987  26.28
 2.04 Intr - 111132 110771  362  1  2   66   65   261 0.678  16.54
 2.03 Intr - 116586 116438  149  2  2  140   76   209 0.999  24.78
 2.02 Intr - 123014 122749  266  2  2  100   96   230 0.632  21.31
 2.01 Init - 124017 123988   30  0  0   89   93     2 0.335   0.56
 2.00 Prom - 125661 125622   40                              -9.06

 3.00 Prom + 126757 126796   40                              -7.56
 3.01 Init + 128099 128122   24  1  0  105  103     2 0.797   3.03
 3.02 Intr + 129720 129899  180  2  0   74   54   252 0.858  20.46
 3.03 Intr + 129971 130052   82  1  1  112  119   -18 0.903   2.91
 3.04 Term + 130341 130366   26  1  2   70   52    14 0.395  -5.61
 3.05 PlyA + 131091 131096    6                              -0.45

 4.19 PlyA - 131231 131226    6                               1.05
 4.18 Term - 134501 134020  482  0  2   73   45   609 0.585  50.06
 4.17 Intr - 135599 135398  202  2  1   96  113   398 0.990  41.96
 4.16 Intr - 136138 136038  101  2  2  100   96   144 0.999  16.23
 4.15 Intr - 136642 136493  150  2  0   86   40   312 0.989  26.33
 4.14 Intr - 137355 137227  129  1  0   44   97   277 0.988  24.87
 4.13 Intr - 139508 139335  174  0  0   66   72   304 0.951  26.51
 4.12 Intr - 139799 139653  147  0  0   98   42   315 0.985  28.11
 4.11 Intr - 140934 140829  106  0  1  140   54   131 0.985  14.69
 4.10 Intr - 141221 141067  155  0  2  105  113   301 0.998  34.09
 4.09 Intr - 142281 142191   91  0  1  129   71   100 0.999  11.97
 4.08 Intr - 144622 144509  114  1  0  134   69    77 0.734  11.04
 4.07 Intr - 145681 145525  157  0  1  107   16   123 0.980   7.01
 4.06 Intr - 147312 147116  197  0  2   74   53   361 0.999  29.41
 4.05 Intr - 148208 148143   66  2  0   94   65    29 0.518   0.30
 4.04 Intr - 148857 148783   75  0  0   69  105   119 0.952  11.41
 4.03 Intr - 149624 149518  107  0  2   81   96   164 0.998  16.43
 4.02 Intr - 151394 151263  132  0  0  104   94   139 0.994  16.72
 4.01 Init - 152615 152546   70  2  1   80   75    84 0.752   7.51
 4.00 Prom - 152983 152944   40                              -7.46

 5.00 Prom + 159072 159111   40                              -4.16
 5.01 Init + 159576 159735  160  2  1   58   70   124 0.579   5.59
 5.02 Term + 159782 159960  179  0  2   53   38   115 0.562   0.85
 5.03 PlyA + 159964 159969    6                               1.05

 6.06 PlyA - 160088 160083    6                               1.05
 6.05 Term - 168660 168117  544  2  1  116   42   658 0.935  57.74
 6.04 Intr - 171437 171050  388  0  1  -20   68   257 0.193   6.75
 6.03 Intr - 171679 171621   59  0  2  129   48    43 0.364   2.93
 6.02 Intr - 172338 172039  300  2  0   86  110   127 0.944  10.55
 6.01 Init - 174883 174828   56  1  2   84   53    87 0.936   5.56
 6.00 Prom - 186562 186523   40                              -3.66

 7.00 Prom + 187399 187438   40                              -0.76
 7.01 Init + 202982 203027   46  1  1  109   62    81 0.974   6.45
 7.02 Term + 203156 203403  248  0  2  131   38   154 0.962  10.65
 7.03 PlyA + 204298 204303    6                               1.05

 8.00 Prom + 206678 206717   40                              -0.96
 8.01 Init + 207900 207948   49  2  1  100   71    71 0.999   5.72
 8.02 Term + 208069 208445  377  2  2   89   48   307 0.958  21.70
 8.03 PlyA + 212231 212236    6                               1.05

 9.03 PlyA - 213641 213636    6                               1.05
 9.02 Term - 214001 213928   74  0  2  110   44    22 0.019  -1.93
 9.01 Init - 220654 220588   67  1  1   94  109   117 0.867  15.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  44346  44228  119  0  2  125   89   317 0.977  33.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_1|57_aa
MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMESSALPFAEERVAASLCVL

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_1|174_bp
atggcggcggcggcggcggcgggcgcgggcccggagatggtccgcgggcaggtgttcgac
gtggggccgcgctacaccaacctctcgtacatcggcgagggcgcctacggcatggagagc
tcagccttaccctttgctgaagaacgtgtagcagccagcctctgtgtcctttaa

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_2|537_aa
MCLFPVREKPGEAWRPSCPGLAAGPRDALGMSSGAPQKSSPMASGAEETPGFLDTLLQDF
PALLNPEDPLPWKAPGTVLSQEEVEGELAELAMGFLGSRKAPPPLAAALAHEAVSQLLQT
DLSEFRKLPREEEEEEEDDDEEEKAPVTLLDAQSLAQSFFNRLWEVAGQWQKQVPLAARA
SQRQWLVSIHAIRNTRRKMEDRHVSLPSFNQLFGLSVSAPVQTLGTASEDRGEGGGPPGT
EKSCPPRLRQERHPSAPVLAQQETKKGNSDPVNRAYFAVFDGHGGVDAARYAAVHVHTNA
ARQPELPTDPEGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQV
ILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDVFQKPYV
SGEADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQGSGLRVAEELVAAA
RERGSHDNITVMVVFLRDPQELLEGGNQGEGDPQAEGRRQDLPSSLPEPETQAPPRS

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_2|1614_bp
atgtgcctctttccagtgagagagaagccgggtgaagcctggagaccctcttgccctggc
ctagctgcaggcccccgggatgctttgggcatgtcctctggagccccacagaagagcagc
ccaatggccagtggagctgaggagaccccaggcttcctggacacgctcctgcaagacttc
ccagccctgctgaacccagaggaccctctgccatggaaggccccagggacggtgctcagc
caggaggaggtggagggcgagctggctgagctggccatgggctttctgggcagcaggaag
gccccgccaccacttgctgctgctctggcccacgaagcagtttcacagctgctacagaca
gacctttccgaattcaggaagttgcccagggaggaagaagaagaggaggaggacgatgac
gaggaggaaaaggcccctgtgaccttgctggatgcccaaagcctggcacagagtttcttt
aaccgcctttgggaagtcgccggccagtggcagaagcaggtgccattggctgcccgggcc
tcacagcggcagtggctggtctccatccacgccatccggaacactcgccgcaagatggag
gaccggcacgtgtccctcccttccttcaaccagctcttcggcttgtctgtgagtgctccc
gtccagaccctggggacagcttcggaggaccggggcgagggtgggggccccccaggtacc
gagaagagctgcccaccaaggctgagacaggagagacacccgtcagcccctgtacttgcc
cagcaagagactaagaagggcaacagtgaccctgtgaaccgcgcctactttgctgtgttt
gatggtcacggaggcgtggatgctgcgaggtacgccgctgtccacgtgcacaccaacgct
gcccgccagccagagctgcccacagaccctgagggagccctcagagaagccttccggcgc
accgaccagatgtttctcaggaaagccaagcgagagcggctgcagagcggcaccacaggt
gtgtgtgcgctcattgcaggagcgaccctgcacgtcgcctggctcggggattcccaggtc
attttggtacagcagggacaggtggtgaagctgatggagccacacagaccagaacggcag
gatgagaaggcgcgcattgaagcattgggtggctttgtgtctcacatggactgctggaga
gtcaacgggaccctggccgtctccagagccatcggggatgtcttccagaagccctacgtg
tctggggaggccgatgcagcttcccgggcgctgacgggctccgaggactacctgctgctt
gcctgtgatggcttctttgacgtcgtaccccaccaggaagttgttggcctggtccagagc
cacctgaccaggcagcagggcagcgggctccgtgtcgccgaggagctggtggctgcggcc
cgggagcggggctcccacgacaacatcacggtcatggtggtcttcctcagggacccccaa
gagctgctggagggcgggaaccagggagaaggggacccccaggcagaagggaggaggcag
gacttgccctccagccttccagaacctgagacccaggctccaccaagaagctag

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_3|103_aa
MALCVQQVLSPRGSVSRKLLPAGPAHFPSLAAAGAAGAAQAQSGLQAGGAGPLLPPGGYV
DGDCGPLVLWVGGWMGKAIPRSQRPEIKQLLPSIAASKPAMAS

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_3|312_bp
atggccctttgtgtacagcaggtgctgtctcctcgcggctccgtgtcccgcaagctgctg
ccggccggccccgcccacttcccgtccctggccgccgcgggcgccgcgggcgccgcgcag
gcgcagtcgggcctccaggctggcggggccggacctctgctgccccctggcggctacgtg
gacggtgactgcggccctttagtgctttgggtgggcggctggatggggaaagcaatccct
aggtcacagcgcccagaaattaagcaacttctgccgtcaatagctgcctcgaagccagca
atggccagttga

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_4|884_aa
MKTVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDK
EGENICFETVVLWVAPVLLYPQLSPVAQELVLDAVLPVMNKAHGGEKTVFRARFSSITDT
DICNAMACLGEPDHNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQ
TPTLGFCVERHDKIQSFKPETYWVLQAKVNTDKDRSLLLDWDRVRVFDREIAQMFLNMTK
LEKEAQVEATSRKEKAKQRPLALNTVEMLRVASSSLGMGPQHAMQTAERLYTQGYISYPR
TETTHYPENFDLKGSLRQQANHPYWADTVKRLLAEGINRPRKGHDAGDHPPITPMKSATE
AELGGDAWRLYEYITRHFIATVSHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTEVMPW
QSVPLEESLPTCQRGDAFPVGEVKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHI
NNICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADY
RQVLGHTLDVFKRKFHYFVDSIAGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKP
SRLHCSHCDETYTLPQNGTIKLYKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFR
DMKKGMGCNECTHPSCQHSLSMLGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCF
ENAHRVRVSADTCSVCEAALLDVDFNKAKSPLPGDETQHMGCVFCDPVFQELVELKHAAS
CHPMHRGGPGRRQGRGRGRARRPPGKPNPRRPKDKMSALAAYFV

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_4|2655_bp
atgaagactgtgctcatggttgctgaaaagccgtccttggcacagtcaattgccaaaatc
ctctctagagggagcctgtcctcacacaaagggctgaacggggcctgctcagtccacgag
tacactgggacctttgctggccagccagtgcgcttcaagatgacgtctgtctgtggtcac
gtgatgaccctggatttcctgggaaaatacaacaaatgggacaaagtggaccccgcagaa
ctgttcagccaagctcccacggagaagaaagaagctaaccccaagctgaacatggtgaag
ttcctgcaggtggagggcagaggctgcgactacatcgtgctgtggctggactgcgacaag
gagggggagaacatctgctttgagactgttgttctatgggtcgcccccgtgctcctgtac
ccccagctctcacccgtggctcaagagctggttcttgatgctgttctgcccgtcatgaac
aaggcccatggtggcgagaagaccgtgttccgggccaggtttagctccatcacggacaca
gacatctgtaatgccatggcctgcctaggcgagcctgaccacaacgaggcgctctcagtg
gatgctcgccaggagctggacctgcgaatcggctgtgcattcaccaggtttcagactaaa
tatttccaggggaaatacggtgatttagacagctctctcatctcctttgggccgtgtcag
actccaaccctgggattctgtgtggagagacatgataaaatccagtccttcaaaccagag
acctactgggtgctgcaggccaaggttaacactgacaaagacagatctctccttttggac
tgggaccgagtaagagtgtttgaccgggagatcgcacagatgtttttaaacatgacaaag
ctggagaaggaagcccaggtggaggccacaagcaggaaagaaaaggccaagcagaggccc
ctggccctgaacactgtggagatgctgcgtgtggccagctcttctctgggcatggggccg
cagcacgccatgcagacggctgagcggctctacacgcaaggctacatcagctacccacgg
acagagaccacccactaccctgagaactttgacctgaagggctctctgcggcagcaggcc
aaccacccctactgggccgacacggtgaagcggttgttagcagaaggtatcaaccgcccg
cggaaaggccatgacgccggcgaccatccccccatcacccccatgaagtctgccacagag
gccgaattagggggtgacgcgtggcggctctatgagtacatcaccagacacttcatcgcc
acggtcagccatgactgcaagtacctgcagagcaccatctccttcagaattgggcccgag
ctcttcacctgctccgggaagaccgtcctctcaccaggcttcacggaggtcatgccctgg
cagagcgtgcccctggaggagagcctgcccacttgccagcggggtgatgccttccctgtg
ggcgaggtgaagatgctggagaagcagacgaacccacccgactacctgacggaggccgag
ctcatcacgctcatggagaagcatggcatcggcacggatgccagcatccctgtgcatatc
aacaacatctgccagcgcaactatgtcacggtggagagcgggcgccggctcaagcccacc
aacctcggcatcgtcctggtgcacggctactataagattgatgcagagctggtgctcccc
accatccgcagtgcagtggagaagcagctgaacctgatcgcccagggcaaggccgactac
cgccaggtcctgggccacaccctggacgtgttcaagaggaagttccactactttgtcgac
tccattgctggcatggatgagttgatggaggtgtctttctcgcccctggcggccacaggc
aagcccctctcacgctgtgggaagtgccaccgcttcatgaagtacatccaggccaagcca
agccgcctgcactgctcccactgcgatgagacctacacgctcccccagaacggcaccatc
aagctctacaaggagctccgctgccctctggatgacttcgagctggtcctgtggtcatca
ggctctcggggcaagagctacccgctgtgcccctactgctacaaccacccacccttccga
gacatgaagaaaggcatgggctgcaacgagtgtacgcacccctcctgccagcactcgctg
agcatgctgggcatcggccagtgcgtggaatgtgagagcggggtgctggtgctggacccc
acctcgggccccaagtggaaggtggcctgcaacaagtgcaacgtggtagcgcactgcttc
gagaacgcccaccgcgtgcgggtgtccgccgacacctgcagtgtctgtgaggccgccttg
cttgatgtggacttcaacaaggccaagtccccactcccgggcgatgagacgcagcacatg
ggctgcgtcttttgtgaccccgtcttccaggagctggtggagctgaagcatgcggcctcc
tgccaccccatgcaccgcggtggaccagggagaaggcagggtcgagggcggggccgggcc
aggaggccccctgggaagcccaaccccagacggcccaaggacaagatgtcagccctggcc
gcctactttgtatga

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_5|112_aa
MRALPAFLSRRARVPQPAAHPQPHRGSSSGPCSRGGYRQPLFPGPAASGVPASGSVARGF
REHPREWHLHAADRRDPQALHPDSSPPRRDNHDNYHYNDYENWHENIYAVNN

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_5|339_bp
atgcgtgcgcttcccgcctttctgagccgccgggcgagggtcccgcagcccgccgctcac
ccacagccgcaccgcggatccagctccggtccttgttcccggggcggctaccgacaaccc
ctatttccgggtccagccgcttctggcgtccccgcgtccggttccgtggctcgcggattc
cgggagcaccccagggagtggcacttgcacgccgcggaccgcagggatccccaagccctg
cacccagattcttccccgccacggagagacaatcatgacaattatcattacaatgattat
gaaaactggcatgaaaacatttatgctgttaataattaa

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_6|448_aa
METPLTYIAVFGEAELEGRSMEVNHPAPLSLLELAAHSLLSNEASVPLVLEQLTVNLFPP
LLTAAFAKGHRKALKALVQAWPFRFLHLGSLIVQWPNQDSLQAVVDGLEAFSAHRACPRK
SELRMLDFTLDSEQVFYCDKFLSDLLTKVEQSHGALHLCCRKLHIEKMAVDSLLRILKTL
RLDFIQELEVFYWCRDFLVLAEPNLSAIQLGRIFNLRSLKLFYYKWAFSSWVRRPSSYFF
SQLTMLGHLRKLHLSHSYLVGKLHYILSCLWVPLHSLEICNCKLLDTDITYLSRSHHTTC
LKKLDLSVNDLSYMIPGPLGTLLRAVSGTLQHLDLKHCWLKDAHLSALLPALCRCSHLSS
LSLSDNPISSACLLSLLEHTMGLMELKQVLYPIPVDCCIYLHGVCRGPVNEDKLCQLQAE
IQKQLQAMQQADMQWSPSTVFAYAAGAV

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_6|1347_bp
atggagaccccactgacctacatcgctgtgtttggtgaagcagaactggagggaaggtcc
atggaggtgaaccacccagcacccctcagcctcttggaacttgcagcccacagcctgctg
agcaatgaggcttcagttccactggtgttggaacagctcacagtgaaccttttcccgcca
ctactcactgctgcatttgccaaggggcacagaaaggctctgaaggccttggtgcaggcc
tggcccttccggtttctccatctgggctctctgatagtgcagtggcccaaccaagacagc
ctgcaagctgtggtggatgggctggaggccttttctgcccacagggcttgtcccaggaag
tcagaactgaggatgctggatttcaccctggactctgagcaagtcttttactgtgataag
ttcctctccgacctcctgacgaaagtggaacagagccacggggccctgcatctctgctgt
aggaagttgcacattgagaagatggccgtcgacagtctgctgaggatcctgaagacactc
aggctggatttcatccaggagctggaggtgttttactggtgtagagacttcttggtattg
gcagagccaaacctatctgccatacagctgggaaggatcttcaacctgcgcagcctcaag
ctcttctactacaagtgggccttctcctcatgggtcaggcggccctccagctacttcttc
tcccagctcaccatgctgggccacctccggaagctgcacctgtctcactcctacctcgta
ggcaaactacattacatactcagctgtctgtgggtcccactacattccctggagatctgc
aactgcaagcttctggacactgacatcacctacttgtcccggagccatcataccacctgc
ctgaagaagctggatctgagcgtcaacgacttgtcctacatgatccctgggcccttgggt
accctgctgagggcagtctcagggacactgcagcacctagacctgaaacactgctggctg
aaggatgcccacctcagtgccctcctgcccgccctgtgccgctgctcccacctcagttcc
ctgagcctctccgacaaccccatctccagtgcctgcctcctgagcctgctggagcacacc
atggggctgatggagctgaagcaggtactctatcccatcccagttgactgctgcatctac
ctgcatggcgtctgccggggtcctgtgaacgaggacaagctgtgccagttgcaggccgag
atacagaagcagctgcaagccatgcagcaggctgacatgcagtggagcccctccactgtc
tttgcttatgcagctggtgcagtttga

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_7|97_aa
MAWTPLLLQLLTLCSGSWAQSALTQEASVSGTVGQKVTLSCTGNSNNVGSYAVGWYQQIS
HGAPKTVMFGNSLPSGIPDRFSGSKSGTTASLTISGL

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_7|294_bp
atggcctggacccctctcctcctccagcttctcaccctctgctcagggtcctgggcacag
tctgcgctgacccaggaagcctcggtgtcagggaccgtgggacagaaggtcaccctctcc
tgtactggaaacagcaacaacgttggaagttatgctgtgggctggtaccaacagatttct
cacggtgctcccaaaactgtgatgtttggaaattctctgccctcagggatccctgaccgc
ttctctggctcaaagtctgggaccacagcctccctgactatctcgggcctctag

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_8|141_aa
MAWTPLLFLTLLLHCTGSLSQLVLTQSPSASASLGASVKLTCTLSSGHSSYAIAWHQQQP
EKGPRYLMKLNSDGSHSKGDGIPDRFSGSSSGAERYLTISSLQSEDEADYYCQTWGTGIH
TVTQADEEVGQKPQPAQGLVI

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_8|426_bp
atggcttggaccccactcctcttcctcaccctcctcctccactgcacagggtctctctcc
cagcttgtgctgactcaatcgccctctgcctctgcctccctgggagcctcggtcaagctc
acctgcactctgagcagtgggcacagcagctacgccatcgcatggcatcagcagcagcca
gagaagggccctcggtacttgatgaagcttaacagtgatggcagccacagcaagggggac
gggatccctgatcgcttctcaggctccagctctggggctgagcgctacctcaccatctcc
agcctccagtctgaggatgaggctgactattactgtcagacctggggcactggcattcac
acagtgacacaggcagatgaggaagtgggacagaaacctcagcctgctcagggtcttgtt
atatga

>gi568815576r:21823095_22046048|GENSCAN_predicted_peptide_9|46_aa
MALVLLRPDSSIFANIVAVPSAAQVHGDLGGAGQMRDQKATREGVF

>gi568815576r:21823095_22046048|GENSCAN_predicted_CDS_9|141_bp
atggccctggtgctgctgcggccagacagctccatctttgccaacattgttgctgtcccc
agtgcagctcaggttcatggagatctgggtggggctgggcagatgagggaccagaaggcc
actcgagagggggtgttctag