Result of FASTA (ccds) for pFN21AE2786
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2786, 936 aa
  1>>>pF1KE2786     936 - 936 aa - 936 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5183+/-0.000768; mu= 13.4031+/- 0.047
 mean_var=181.4995+/-35.659, 0's: 0 Z-trim(115.7): 60  B-trim: 73 in 1/54
 Lambda= 0.095200
 statistics sampled from 16434 (16496) to 16434 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.494), width:  16
 Scan time:  2.420

The best scores are:                                      opt bits E(33420)
CCDS56225.1 ZNRF3 gene_id:84133|Hs109|chr22        ( 936) 6540 910.9       0
CCDS42999.1 ZNRF3 gene_id:84133|Hs109|chr22        ( 836) 5876 819.7       0
CCDS11607.1 RNF43 gene_id:54894|Hs109|chr17        ( 783)  746 115.1 5.6e-25
CCDS82172.1 RNF43 gene_id:54894|Hs109|chr17        ( 656)  507 82.2 3.8e-15


>>CCDS56225.1 ZNRF3 gene_id:84133|Hs109|chr22             (936 aa)
 initn: 6540 init1: 6540 opt: 6540  Z-score: 4861.8  bits: 910.9 E(33420):    0
Smith-Waterman score: 6540; 100.0% identity (100.0% similar) in 936 aa overlap (1-936:1-936)

               10        20        30        40        50        60
pF1KE2 MRPRSGGRPGATGRRRRRLRRRPRGLRCSRLPPPPPLPLLLGLLLAAAGPGAARAKETAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MRPRSGGRPGATGRRRRRLRRRPRGLRCSRLPPPPPLPLLLGLLLAAAGPGAARAKETAF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 VEVVLFESSPSGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VEVVLFESSPSGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 VGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 VYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 KLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKY
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 IDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQ
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 RVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 PLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 EQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE2 GYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE2 SRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVST
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE2 CSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSP
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE2 AGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCC
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE2 FYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDL
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KE2 GLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAV
              850       860       870       880       890       900

              910       920       930      
pF1KE2 RANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
       ::::::::::::::::::::::::::::::::::::
CCDS56 RANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
              910       920       930      

>>CCDS42999.1 ZNRF3 gene_id:84133|Hs109|chr22             (836 aa)
 initn: 5876 init1: 5876 opt: 5876  Z-score: 4369.6  bits: 819.7 E(33420):    0
Smith-Waterman score: 5876; 100.0% identity (100.0% similar) in 836 aa overlap (101-936:1-836)

               80        90       100       110       120       130
pF1KE2 SGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPE
                                     ::::::::::::::::::::::::::::::
CCDS42                               MHPLGLCNNNDEEDLYEYGWVGVVKLEQPE
                                             10        20        30

              140       150       160       170       180       190
pF1KE2 LDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIK
               40        50        60        70        80        90

              200       210       220       230       240       250
pF1KE2 LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNS
              100       110       120       130       140       150

              260       270       280       290       300       310
pF1KE2 MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIP
              160       170       180       190       200       210

              320       330       340       350       360       370
pF1KE2 CTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPG
              220       230       240       250       260       270

              380       390       400       410       420       430
pF1KE2 RVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAA
              280       290       300       310       320       330

              440       450       460       470       480       490
pF1KE2 HRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
              340       350       360       370       380       390

              500       510       520       530       540       550
pF1KE2 APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSD
              400       410       420       430       440       450

              560       570       580       590       600       610
pF1KE2 SSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEA
              460       470       480       490       500       510

              620       630       640       650       660       670
pF1KE2 GGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSN
              520       530       540       550       560       570

              680       690       700       710       720       730
pF1KE2 SSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSPAGPSAGAAGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSPAGPSAGAAGS
              580       590       600       610       620       630

              740       750       760       770       780       790
pF1KE2 STLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCCFYEEKQVARG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 STLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCCFYEEKQVARG
              640       650       660       670       680       690

              800       810       820       830       840       850
pF1KE2 GGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDLGLPSDCQGTH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDLGLPSDCQGTH
              700       710       720       730       740       750

              860       870       880       890       900       910
pF1KE2 SLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
              760       770       780       790       800       810

              920       930      
pF1KE2 TQESSTTATEAAGPRSHSADSSSPGA
       ::::::::::::::::::::::::::
CCDS42 TQESSTTATEAAGPRSHSADSSSPGA
              820       830      

>>CCDS11607.1 RNF43 gene_id:54894|Hs109|chr17             (783 aa)
 initn: 873 init1: 266 opt: 746  Z-score: 562.1  bits: 115.1 E(33420): 5.6e-25
Smith-Waterman score: 1003; 31.6% identity (53.5% similar) in 883 aa overlap (42-884:29-782)

              20        30        40        50        60        70 
pF1KE2 TGRRRRRLRRRPRGLRCSRLPPPPPLPLLLGLLLAAAGPGAARAKETAFVEVVLFESSPS
                                     ::.::::  .   :.. :...:. .. .:.
CCDS11   MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPT
                 10        20        30        40        50        

              80        90       100       110       120       130 
pF1KE2 GDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPEL
       :  .     : : :. ..    :::...: ::: ::: .:...: : :....::::.:. 
CCDS11 GKLNLT---LEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNL-EPGFISIVKLESPRR
       60           70        80        90        100       110    

             140       150       160       170       180       190 
pF1KE2 DPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKL
        :.:::.. .::. : .:::.::.::..:.  : .::.:     :  ::: . : :: ::
CCDS11 APRPCLSLASKARMAGERGASAVLFDITEDRAAAEQLQQPL--GLTWPVVLIWGNDAEKL
          120       130       140       150         160       170  

             200        210       220       230       240          
pF1KE2 MNIVNKQKVARARIQHR-PPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQ-N
       :..: :.. :..::. . ::  :   .:. :...   .. .. :  ...:. . :.:. .
CCDS11 MEFVYKNQKAHVRIELKEPPAWPD--YDVWILMTVVGTIFVIILASVLRIRCRPRHSRPD
            180       190         200       210       220       230

     250       260       270       280        290        300       
pF1KE2 SMNRLAVQALEKMETRKFNSKSKGRREGSCGAL-DTLSSSSTSD-CAICLEKYIDGEELR
        ... .. :. .. ::..... .  :    :   :. :: :..  ::::::.. .:.:::
CCDS11 PLQQRTAWAISQLATRRYQASCRQAR----GEWPDSGSSCSSAPVCAICLEEFSEGQELR
              240       250           260       270       280      

       310       320       330       340       350       360       
pF1KE2 VIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVH
       :: : :.:::.:::::: ::.::: :  :: :  .  ...    :    ::  :. :  .
CCDS11 VISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQSLGPSRSYQEPGR--RLHLIRQ
        290       300       310       320       330         340    

       370       380           390       400       410       420   
pF1KE2 YPGRVHRTNAIPAY----PTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLH
       .::..:    .::     :.:...     :               .:  :.   .. : :
CCDS11 HPGHAHYH--LPAAYLLGPSRSAVARPPRP---------------GPFLPSQEPGMGPRH
          350         360       370                      380       

           430       440       450       460       470         480 
pF1KE2 LDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQG--LSYPE
              ::     ::  :  : .. .:.:                :: : ::  ::. .
CCDS11 -------HRFP---RAAHPRAPGEQQRLAGA---------------QHPYAQGWGLSHLQ
              390          400                      410       420  

             490       500       510       520       530       540 
pF1KE2 QEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSG
       . .: : .  :    :: ::..:::                 : .     :  .:   ::
CCDS11 STSQHPAA-CPVPLRRARPPDSSGS-----------------GES-----YCTER---SG
            430        440                             450         

             550       560       570       580       590       600 
pF1KE2 YLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRS
       :::: :.:::    ::: :: :::::::.::..: :::.:: ::: ::::::.::..: :
CCDS11 YLADGPASDS----SSGPCHGSSSDSVVNCTDISLQGVHGSSSTFCSSLSSDFDPLVYCS
        460           470       480       490       500       510  

               610            620       630       640         650  
pF1KE2 RS--PCRASEAGGSGSSGRG-----PALCFEGSPPPEELPAVHSHGAGRGEPWPG--PAS
        .  : :..   .  :  :.     :.   . :   .     : :   : . : :  :. 
CCDS11 PKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSSHVHYHRHRHHHYKKRFQ-WHGRKPGP
            520       530       540       550       560        570 

            660       670       680       690       700       710  
pF1KE2 PSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCAC
        .:   :   .     .. . :  .:......     : .:::. : .       :.:  
CCDS11 ETGVPQSRPPIP---RTQPQPEPPSPDQQVTR-----SNSAAPSGRLSN------PQCPR
             580          590       600            610             

             720       730                740       750       760  
pF1KE2 CC-EPQPSPAGPSAGAAGSSTLF------LG---PHLYEGSGPAGGEPQSGSSQGLYGLH
          :: :.:.  :.   ..:.::      :.   :.  . .::.  ::  ::      .:
CCDS11 ALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQRKRRGGPS--EPTPGSRPQDATVH
       620       630       640       650       660         670     

               770       780       790       800       810         
pF1KE2 P--DHLPR-TDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCY
       :  . .:. : .: :   :    : . .  :  : .           .  : : : : ::
CCDS11 PACQIFPHYTPSVAYPWSP----EAHPLICGPPGLD-----------KRLLPETPGP-CY
         680       690           700                  710          

     820           830       840       850       860        870    
pF1KE2 PGARD----LSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPH-RGLGA--
        ...     :. : :. :.        :..  :    .:   ..:   : :: . :.:  
CCDS11 SNSQPVWLCLTPRQPLEPHP-------PGE--GPSEWSS-DTAEGRPCPYPHCQVLSAQP
     720       730              740          750       760         

             880       890       900       910       920       930 
pF1KE2 -TREEERALCCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADS
        ..:: . :: ::                                               
CCDS11 GSEEELEELCEQAV                                              
     770       780                                                 

>>CCDS82172.1 RNF43 gene_id:54894|Hs109|chr17             (656 aa)
 initn: 709 init1: 266 opt: 507  Z-score: 385.7  bits: 82.2 E(33420): 3.8e-15
Smith-Waterman score: 764; 30.8% identity (51.2% similar) in 779 aa overlap (146-884:2-655)

         120       130       140       150       160       170     
pF1KE2 YEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDP
                                     : .:::.::.::..:.  : .::.:     
CCDS82                              MAGERGASAVLFDITEDRAAAEQLQQ--PLG
                                            10        20           

         180       190       200        210       220       230    
pF1KE2 LKRPVVYVKGADAIKLMNIVNKQKVARARIQHR-PPRQPTEYFDMGIFLAFFVVVSLVCL
       :  ::: . : :: :::..: :.. :..::. . ::  :   .:. :...   .. .. :
CCDS82 LTWPVVLIWGNDAEKLMEFVYKNQKAHVRIELKEPPAWPD--YDVWILMTVVGTIFVIIL
      30        40        50        60          70        80       

          240        250       260       270       280        290  
pF1KE2 ILLVKIKLKQRRSQ-NSMNRLAVQALEKMETRKFNSKSKGRREGSCGAL-DTLSSSSTSD
         ...:. . :.:. . ... .. :. .. ::..... .  :    :   :. :: :.. 
CCDS82 ASVLRIRCRPRHSRPDPLQQRTAWAISQLATRRYQASCRQAR----GEWPDSGSSCSSAP
        90       100       110       120           130       140   

             300       310       320       330       340       350 
pF1KE2 -CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET
        ::::::.. .:.::::: : :.:::.:::::: ::.::: :  :: :  .  ...    
CCDS82 VCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQSLGPSR
           150       160       170       180       190       200   

             360       370       380           390       400       
pF1KE2 SNLSRGRQQRVTLPVHYPGRVHRTNAIPAY----PTRTSMDSHGNPVTLLTMDRHGEQSL
       :    ::  :. :  ..::..:    .::     :.:...     :              
CCDS82 SYQEPGR--RLHLIRQHPGHAHYH--LPAAYLLGPSRSAVARPPRP--------------
           210         220         230       240                   

       410       420       430       440       450       460       
pF1KE2 YSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYET
        .:  :.   .. : :       ::     ::  :  : .. .:.:              
CCDS82 -GPFLPSQEPGMGPRH-------HRFP---RAAHPRAPGEQQRLAGA-------------
          250       260                 270       280              

       470         480       490       500       510       520     
pF1KE2 MYQHYYFQG--LSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGS
         :: : ::  ::. .. .: : .  :    :: ::..:::                 : 
CCDS82 --QHPYAQGWGLSHLQSTSQHPAA-CPVPLRRARPPDSSGS-----------------GE
               290       300        310                        320 

         530       540       550       560       570       580     
pF1KE2 TSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCST
       .     :  .::   ::::: :.:::    ::: :: :::::::.::..: :::.:: ::
CCDS82 S-----YCTERS---GYLADGPASDS----SSGPCHGSSSDSVVNCTDISLQGVHGSSST
                     330           340       350       360         

         590       600         610            620       630        
pF1KE2 FRSSLSSDYDPFIYRSRS--PCRASEAGGSGSSGRG-----PALCFEGSPPPEELPAVHS
       : ::::::.::..: : .  : :..   .  :  :.     :.   . :   .     : 
CCDS82 FCSSLSSDFDPLVYCSPKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSSHVHYHRHRHH
     370       380       390       400       410       420         

      640         650       660       670       680       690      
pF1KE2 HGAGRGEPWPG--PASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPD
       :   : . : :  :.  .:   :   .     .. . :  .:......     : .:::.
CCDS82 HYKKRFQ-WHGRKPGPETGVPQSRPPIP---RTQPQPEPPSPDQQVTR-----SNSAAPS
     430        440       450          460       470            480

        700       710        720       730                740      
pF1KE2 LRRTWKGGHELPSCACCC-EPQPSPAGPSAGAAGSSTLF------LG---PHLYEGSGPA
        : .       :.:     :: :.:.  :.   ..:.::      :.   :.  . .::.
CCDS82 GRLSN------PQCPRALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQRKRRGGPS
                    490       500       510       520       530    

        750       760          770       780       790       800   
pF1KE2 GGEPQSGSSQGLYGLHP--DHLPR-TDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYS
         ::  ::      .::  . .:. : .: :   :    : . .  :  : .        
CCDS82 --EPTPGSRPQDATVHPACQIFPHYTPSVAYPWSP----EAHPLICGPPGLD--------
            540       550       560           570       580        

           810       820           830       840       850         
pF1KE2 VSVQYTLTEEPPPGCYPGARD----LSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTR
          .  : : : : :: ...     :. : :. :.        :.  .:    .:   ..
CCDS82 ---KRLLPETPGP-CYSNSQPVWLCLTPRQPLEPHP-------PG--EGPSEWSS-DTAE
                 590        600       610                620       

     860        870          880       890       900       910     
pF1KE2 GPDTPRPH-RGLGA---TREEERALCCQARALLRPGCPPEEAGAVRANFPSALQDTQESS
       :   : :: . :.:   ..:: . :: ::                               
CCDS82 GRPCPYPHCQVLSAQPGSEEELEELCEQAV                              
        630       640       650                                    




936 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Feb 19 20:43:56 2021 done: Fri Feb 19 20:43:57 2021
 Total Scan time:  2.420 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com