FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3896, 325 aa 1>>>pF1KE3896 325 - 325 aa - 325 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8355+/-0.000984; mu= 14.2338+/- 0.059 mean_var=89.1940+/-17.586, 0's: 0 Z-trim(106.7): 42 B-trim: 183 in 1/51 Lambda= 0.135802 statistics sampled from 9251 (9285) to 9251 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.278), width: 16 Scan time: 1.320 The best scores are: opt bits E(33420) CCDS13468.1 STX16 gene_id:8675|Hs109|chr20 ( 325) 2071 415.7 2.5e-116 CCDS46619.1 STX16 gene_id:8675|Hs109|chr20 ( 321) 2028 407.3 8.6e-114 CCDS46620.1 STX16 gene_id:8675|Hs109|chr20 ( 308) 1809 364.4 6.9e-101 CCDS13469.1 STX16 gene_id:8675|Hs109|chr20 ( 304) 1792 361.0 6.8e-100 CCDS56199.1 STX16 gene_id:8675|Hs109|chr20 ( 272) 1747 352.2 2.8e-97 CCDS310.1 STX12 gene_id:23673|Hs109|chr1 ( 276) 329 74.4 1.2e-13 CCDS5153.1 STX7 gene_id:8417|Hs109|chr6 ( 261) 318 72.2 5.2e-13 CCDS34655.1 STX1A gene_id:6804|Hs109|chr7 ( 288) 290 66.7 2.5e-11 >>CCDS13468.1 STX16 gene_id:8675|Hs109|chr20 (325 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 2202.0 bits: 415.7 E(33420): 2.5e-116 Smith-Waterman score: 2071; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KE3 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR 250 260 270 280 290 300 310 320 pF1KE3 KMLVILILFVIIIVLIVVLVGVKSR ::::::::::::::::::::::::: CCDS13 KMLVILILFVIIIVLIVVLVGVKSR 310 320 >>CCDS46619.1 STX16 gene_id:8675|Hs109|chr20 (321 aa) initn: 1780 init1: 1780 opt: 2028 Z-score: 2156.6 bits: 407.3 E(33420): 8.6e-114 Smith-Waterman score: 2028; 98.8% identity (98.8% similar) in 325 aa overlap (1-325:1-321) 10 20 30 40 50 60 pF1KE3 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI :::::::::::::::::::::::::::::::::::::::::::: :::::::::::: CCDS46 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAA----LADDRMALVSGI 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR 240 250 260 270 280 290 310 320 pF1KE3 KMLVILILFVIIIVLIVVLVGVKSR ::::::::::::::::::::::::: CCDS46 KMLVILILFVIIIVLIVVLVGVKSR 300 310 320 >>CCDS46620.1 STX16 gene_id:8675|Hs109|chr20 (308 aa) initn: 1955 init1: 1805 opt: 1809 Z-score: 1925.0 bits: 364.4 E(33420): 6.9e-101 Smith-Waterman score: 1925; 94.8% identity (94.8% similar) in 325 aa overlap (1-325:1-308) 10 20 30 40 50 60 pF1KE3 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI ::::::::::::::::::::::::::: :::::::::::::::: CCDS46 MATRRLTDAFLLLRNNSIQNRQLLAEQ-----------------ELDELADDRMALVSGI 10 20 30 40 70 80 90 100 110 120 pF1KE3 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR 230 240 250 260 270 280 310 320 pF1KE3 KMLVILILFVIIIVLIVVLVGVKSR ::::::::::::::::::::::::: CCDS46 KMLVILILFVIIIVLIVVLVGVKSR 290 300 >>CCDS13469.1 STX16 gene_id:8675|Hs109|chr20 (304 aa) initn: 1784 init1: 1784 opt: 1792 Z-score: 1907.0 bits: 361.0 E(33420): 6.8e-100 Smith-Waterman score: 1892; 93.5% identity (93.5% similar) in 325 aa overlap (1-325:1-304) 10 20 30 40 50 60 pF1KE3 MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI ::::::::::::::::::::::::::: :::::::::::: CCDS13 MATRRLTDAFLLLRNNSIQNRQLLAEQ---------------------LADDRMALVSGI 10 20 30 70 80 90 100 110 120 pF1KE3 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE3 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREI 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 RQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR 220 230 240 250 260 270 310 320 pF1KE3 KMLVILILFVIIIVLIVVLVGVKSR ::::::::::::::::::::::::: CCDS13 KMLVILILFVIIIVLIVVLVGVKSR 280 290 300 >>CCDS56199.1 STX16 gene_id:8675|Hs109|chr20 (272 aa) initn: 1747 init1: 1747 opt: 1747 Z-score: 1860.1 bits: 352.2 E(33420): 2.8e-97 Smith-Waterman score: 1747; 100.0% identity (100.0% similar) in 272 aa overlap (54-325:1-272) 30 40 50 60 70 80 pF1KE3 LAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVD :::::::::::::::::::::::::::::: CCDS56 MALVSGISLDPEAAIGVTKRPPPKWVDGVD 10 20 30 90 100 110 120 130 140 pF1KE3 EIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 EIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQAL 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 PSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 PSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVP 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 LMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVE 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 QGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 QGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVK 220 230 240 250 260 270 pF1KE3 SR :: CCDS56 SR >>CCDS310.1 STX12 gene_id:23673|Hs109|chr1 (276 aa) initn: 316 init1: 292 opt: 329 Z-score: 358.5 bits: 74.4 E(33420): 1.2e-13 Smith-Waterman score: 329; 29.3% identity (62.5% similar) in 256 aa overlap (76-320:17-268) 50 60 70 80 90 100 pF1KE3 LDELADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDK :. : . :: : :.. . :.... CCDS31 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNL 10 20 30 40 110 120 130 140 150 pF1KE3 HLNRPTLDDSS---EEEHAIEITTQEITQLFHRCQRAVQALP-----SRARACSEQEGRL . : .::: :. . .. .:..... .. . . .:: :. : :. :: CCDS31 MSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERL 50 60 70 80 90 100 160 170 180 190 200 210 pF1KE3 LGNVVASLA--QALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDD-NTLY ... :.: ::.:. .: .. .: : .: .. . .. .:. .. : . CCDS31 MNDFSAALNNFQAVQR-RVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQ 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE3 HRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN . ::.....::. ...::: :::. .: :.:.::.::. :: .:: ..: :. : CCDS31 SQ---EDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN 170 180 190 200 210 220 280 290 300 310 320 pF1KE3 VEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSR ::.: ...: . .::..: ::::.:: . ::.: . .:.::. :. CCDS31 VESSEVHVERATEQLQRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK 230 240 250 260 270 >>CCDS5153.1 STX7 gene_id:8417|Hs109|chr6 (261 aa) initn: 342 init1: 264 opt: 318 Z-score: 347.2 bits: 72.2 E(33420): 5.2e-13 Smith-Waterman score: 318; 30.8% identity (63.3% similar) in 237 aa overlap (94-320:23-255) 70 80 90 100 110 120 pF1KE3 PEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNR-PTLDDSSEEEHAI ::. . . .. ::. : .:: : .. . CCDS51 MSYTPGVGGDPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQL 10 20 30 40 50 130 140 150 160 170 180 pF1KE3 EITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGN--VVASLAQALQELSTSFRHAQ . : .:: .. .. .. . : . :::. : . . .:: .. .: :.:...: CCDS51 QQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSL----TNFQKVQ 60 70 80 90 100 190 200 210 220 230 pF1KE3 SGYLKRMKN--REERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLV-----LVEQNTLMV .: :. . :.. . : : .. . : . .. :. :. ..:.. .. CCDS51 RQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQPQVQVQDEEITEDDLRLI 110 120 130 140 150 160 240 250 260 270 280 290 pF1KE3 EEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAE .::: :::. .: :.::::.::: :: ::: :.: :. :::.. ...... .:: .: CCDS51 HERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAA 170 180 190 200 210 220 300 310 320 pF1KE3 QYQKKNRKMLVILILFVIIIVLIVVLVGVKSR .::.:.:: : :.::...: : :. :. CCDS51 DYQRKSRKTLCIIILILVIGVAIISLIIWGLNH 230 240 250 260 >>CCDS34655.1 STX1A gene_id:6804|Hs109|chr7 (288 aa) initn: 175 init1: 152 opt: 290 Z-score: 317.0 bits: 66.7 E(33420): 2.5e-11 Smith-Waterman score: 290; 25.1% identity (61.6% similar) in 271 aa overlap (63-321:17-284) 40 50 60 70 80 90 pF1KE3 TSSPLHSRSIAAELDELADDRMALVSGISLDPEAAIGVTK-RPPPKWVDGVDEIQYDVGR : ..:. : . : .. . :.::. . . CCDS34 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDK 10 20 30 40 100 110 120 130 140 pF1KE3 IKQKMKELASLHDKHLNRPTLDDSSEEE-----HAIEITTQEITQLFHRCQRAVQALPSR : ....:. :. : :. :....:: :. :.... . .. ..... . CCDS34 IAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGL 50 60 70 80 90 100 150 160 170 180 190 200 pF1KE3 ARACSEQEGRLLGNVVASLAQALQELSTSFRHAQSGYLKRMKNREERSQHFFD---TSVP :. .. . : . ..:.. . :. . . .:: : .: :.: .:. .. :: CCDS34 NRSSADLRIRKTQH--STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEE 110 120 130 140 150 160 210 220 230 240 250 260 pF1KE3 LMD--DGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMI : : .. . ... :. :. . .: .: :. :: .. .:: .:...: :.. .. CCDS34 LEDMLESGNPAIFASGIIMDSSI-SKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLV 170 180 190 200 210 220 270 280 290 300 310 320 pF1KE3 VEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNR-KMLVILILFVIIIVLIVVLV :: ..:::.::::.. .: .... .:: .::.: : : ..:.: ::. ..:. : CCDS34 ESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTV 230 240 250 260 270 280 pF1KE3 GVKSR : CCDS34 GGIFA 325 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Aug 4 20:31:56 2021 done: Wed Aug 4 20:31:56 2021 Total Scan time: 1.320 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]