Result of FASTA (ccds) for
pFN21AE3892
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3892, 153 aa
1>>>pF1KE3892 153 - 153 aa - 153 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4618+/-0.000784; mu= 12.0146+/- 0.047
mean_var=116.3079+/-26.331, 0's: 0 Z-trim(111.5): 34 B-trim: 520 in 1/51
Lambda= 0.118924
statistics sampled from 12599 (12628) to 12599 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.378), width: 16
Scan time: 0.830
The best scores are: opt bits E(33420)
CCDS43934.1 SSX4 gene_id:6759|Hs109|chrX ( 153) 1072 193.9 3.3e-50
CCDS43935.1 SSX4B gene_id:548313|Hs109|chrX ( 153) 1072 193.9 3.3e-50
CCDS35240.1 SSX4 gene_id:6759|Hs109|chrX ( 188) 747 138.2 2.3e-33
CCDS35241.1 SSX4B gene_id:548313|Hs109|chrX ( 188) 747 138.2 2.3e-33
CCDS14289.1 SSX5 gene_id:6758|Hs109|chrX ( 188) 588 111.0 3.8e-25
CCDS14343.1 SSX7 gene_id:280658|Hs109|chrX ( 188) 575 108.7 1.8e-24
CCDS14290.1 SSX1 gene_id:6756|Hs109|chrX ( 188) 569 107.7 3.6e-24
CCDS14344.2 SSX2 gene_id:6757|Hs109|chrX ( 188) 562 106.5 8.4e-24
CCDS14291.1 SSX3 gene_id:10214|Hs109|chrX ( 188) 562 106.5 8.4e-24
CCDS48129.1 SSX2B gene_id:727837|Hs109|chrX ( 188) 562 106.5 8.4e-24
CCDS65267.1 SSX2B gene_id:727837|Hs109|chrX ( 223) 562 106.6 9.3e-24
CCDS14345.2 SSX2 gene_id:6757|Hs109|chrX ( 223) 562 106.6 9.3e-24
CCDS14288.1 SSX5 gene_id:6758|Hs109|chrX ( 229) 480 92.5 1.6e-19
>>CCDS43934.1 SSX4 gene_id:6759|Hs109|chrX (153 aa)
initn: 1072 init1: 1072 opt: 1072 Z-score: 1015.0 bits: 193.9 E(33420): 3.3e-50
Smith-Waterman score: 1072; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
:::::::::::::::::::::::::::::::::
CCDS43 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
130 140 150
>>CCDS43935.1 SSX4B gene_id:548313|Hs109|chrX (153 aa)
initn: 1072 init1: 1072 opt: 1072 Z-score: 1015.0 bits: 193.9 E(33420): 3.3e-50
Smith-Waterman score: 1072; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
:::::::::::::::::::::::::::::::::
CCDS43 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
130 140 150
>>CCDS35240.1 SSX4 gene_id:6759|Hs109|chrX (188 aa)
initn: 780 init1: 747 opt: 747 Z-score: 712.6 bits: 138.2 E(33420): 2.3e-33
Smith-Waterman score: 747; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
CCDS35 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI
130 140 150 160 170 180
>>CCDS35241.1 SSX4B gene_id:548313|Hs109|chrX (188 aa)
initn: 780 init1: 747 opt: 747 Z-score: 712.6 bits: 138.2 E(33420): 2.3e-33
Smith-Waterman score: 747; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
CCDS35 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI
130 140 150 160 170 180
>>CCDS14289.1 SSX5 gene_id:6758|Hs109|chrX (188 aa)
initn: 588 init1: 588 opt: 588 Z-score: 565.1 bits: 111.0 E(33420): 3.8e-25
Smith-Waterman score: 588; 78.2% identity (91.8% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
:::::::.:::: .:: ::..:::::::::::.:::::::.::::.::::: .::.:::
CCDS14 MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::.:::::::.::.:::.:::: :: :. ::::.:::::: :: ::::
CCDS14 LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEG
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
CCDS14 NDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEI
130 140 150 160 170 180
>>CCDS14343.1 SSX7 gene_id:280658|Hs109|chrX (188 aa)
initn: 588 init1: 575 opt: 575 Z-score: 553.1 bits: 108.7 E(33420): 1.8e-24
Smith-Waterman score: 575; 78.2% identity (89.1% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
:::::::::::: ::: ::..:.:::::::::::::::::: ::: ::::: .::.:::
CCDS14 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::.::::::.. :.:..:::: ::::. :::::::::: :::::::
CCDS14 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
CCDS14 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI
130 140 150 160 170 180
>>CCDS14290.1 SSX1 gene_id:6756|Hs109|chrX (188 aa)
initn: 569 init1: 569 opt: 569 Z-score: 547.5 bits: 107.7 E(33420): 3.6e-24
Smith-Waterman score: 569; 76.4% identity (90.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
:::::.::.::::::. ::: ::::::: :::::::.::: :::: ::::: ::..:::
CCDS14 MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::::::::: .:.:.::.:::: ::.:.: :::.:::::: :.::.::
CCDS14 LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDE
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
CCDS14 NDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEI
130 140 150 160 170 180
>>CCDS14344.2 SSX2 gene_id:6757|Hs109|chrX (188 aa)
initn: 576 init1: 560 opt: 562 Z-score: 541.0 bits: 106.5 E(33420): 8.4e-24
Smith-Waterman score: 562; 70.0% identity (80.8% similar) in 130 aa overlap (1-128:1-130)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
::::::::::: ::: ::..::::::::::::.::::::.:::: ::::: .::.:::
CCDS14 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKD-PKGGNMPG
::::.:::::: .::: ::.:::. :: :. ::::::::::: :: : :: :: :
CCDS14 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
70 80 90 100 110 120
120 130 140 150
pF1KE3 -PTDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
.. : :.:
CCDS14 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI
130 140 150 160 170 180
>>CCDS14291.1 SSX3 gene_id:10214|Hs109|chrX (188 aa)
initn: 576 init1: 562 opt: 562 Z-score: 541.0 bits: 106.5 E(33420): 8.4e-24
Smith-Waterman score: 562; 76.4% identity (88.2% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
:::::.::::: ::: ::..::::::::::::.:::::: :::::::::: .::.:::
CCDS14 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGP
::::. :: :::.::..::.:::: :: :. :::.::::::: :: ::::
CCDS14 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG
70 80 90 100 110 120
130 140 150
pF1KE3 TDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
CCDS14 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEI
130 140 150 160 170 180
>>CCDS48129.1 SSX2B gene_id:727837|Hs109|chrX (188 aa)
initn: 576 init1: 560 opt: 562 Z-score: 541.0 bits: 106.5 E(33420): 8.4e-24
Smith-Waterman score: 562; 70.0% identity (80.8% similar) in 130 aa overlap (1-128:1-130)
10 20 30 40 50 60
pF1KE3 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK
::::::::::: ::: ::..::::::::::::.::::::.:::: ::::: .::.:::
CCDS48 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKD-PKGGNMPG
::::.:::::: .::: ::.:::. :: :. ::::::::::: :: : :: :: :
CCDS48 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG
70 80 90 100 110 120
120 130 140 150
pF1KE3 -PTDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP
.. : :.:
CCDS48 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI
130 140 150 160 170 180
153 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Aug 4 20:43:16 2021 done: Wed Aug 4 20:43:17 2021
Total Scan time: 0.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]