FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2688, 1394 aa 1>>>pF1KE2688 1394 - 1394 aa - 1394 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5487+/-0.00123; mu= 22.4581+/- 0.074 mean_var=74.1266+/-14.756, 0's: 0 Z-trim(101.2): 33 B-trim: 0 in 0/49 Lambda= 0.148966 statistics sampled from 6427 (6439) to 6427 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.541), E-opt: 0.2 (0.198), width: 16 Scan time: 3.690 The best scores are: opt bits E(32554) CCDS33189.1 LRPPRC gene_id:10128|Hs108|chr2 (1394) 8978 1940.1 0 >>CCDS33189.1 LRPPRC gene_id:10128|Hs108|chr2 (1394 aa) initn: 8978 init1: 8978 opt: 8978 Z-score: 10417.7 bits: 1940.1 E(32554): 0 Smith-Waterman score: 8978; 100.0% identity (100.0% similar) in 1394 aa overlap (1-1394:1-1394) 10 20 30 40 50 60 pF1KE2 MAALLRSARWLLRAGAAPRLPLSLRLLPGGPGRLHAASYLPAARAGPVAGGLLSPARLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MAALLRSARWLLRAGAAPRLPLSLRLLPGGPGRLHAASYLPAARAGPVAGGLLSPARLYA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 IAAKEKDIQEESTFSSRKISNQFDWALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 IAAKEKDIQEESTFSSRKISNQFDWALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SHALLLLRSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SHALLLLRSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 PTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 PTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 MDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVTEKLEDVALQILLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVTEKLEDVALQILLA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 CPVSKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEVQMHSFPLQFTLHCALLANKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 CPVSKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEVQMHSFPLQFTLHCALLANKT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 DLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELGVHPDQETYTDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELGVHPDQETYTDY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 VIPCFDSVNSARAILQENGCLSDSDMFSQAGLRSEAANGNLDFVLSFLKSNTLPISLQSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 VIPCFDSVNSARAILQENGCLSDSDMFSQAGLRSEAANGNLDFVLSFLKSNTLPISLQSI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 RSSLLLGFRRSMNINLWSEITELLYKDGRYCQEPRGPTEAVGYFLYNLIDSMSDSEVQAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 RSSLLLGFRRSMNINLWSEITELLYKDGRYCQEPRGPTEAVGYFLYNLIDSMSDSEVQAK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 EEHLRQYFHQLEKMNVKIPENIYRGIRNLLESYHVPELIKDAHLLVESKNLDFQKTVQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 EEHLRQYFHQLEKMNVKIPENIYRGIRNLLESYHVPELIKDAHLLVESKNLDFQKTVQLT 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 SSELESTLETLKAENQPIRDVLKQLILVLCSEENMQKALELKAKYESDMVTGGYAALINL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SSELESTLETLKAENQPIRDVLKQLILVLCSEENMQKALELKAKYESDMVTGGYAALINL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 CCRHDKVEDALNLKEEFDRLDSSAVLDTGKYVGLVRVLAKHGKLQDAINILKEMKEKDVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 CCRHDKVEDALNLKEEFDRLDSSAVLDTGKYVGLVRVLAKHGKLQDAINILKEMKEKDVL 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 IKDTTALSFFHMLNGAALRGEIETVKQLHEAIVTLGLAEPSTNISFPLVTVHLEKGDLST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 IKDTTALSFFHMLNGAALRGEIETVKQLHEAIVTLGLAEPSTNISFPLVTVHLEKGDLST 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE2 ALEVAIDCYEKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEMVMLYDLFFAFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ALEVAIDCYEKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEMVMLYDLFFAFLQ 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE2 TGNYKEAKKIIETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQKLFECDRDQMYYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 TGNYKEAKKIIETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQKLFECDRDQMYYN 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE2 LLKLYKINGDWQRADAVWNKIQEENVIPREKTLRLLAEILREGNQEVPFDVPELWYEDEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LLKLYKINGDWQRADAVWNKIQEENVIPREKTLRLLAEILREGNQEVPFDVPELWYEDEK 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE2 HSLNSSSASTTEPDFQKDILIACRLNQKKGAYDIFLNAKEQNIVFNAETYSNLIKLLMSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 HSLNSSSASTTEPDFQKDILIACRLNQKKGAYDIFLNAKEQNIVFNAETYSNLIKLLMSE 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE2 DYFTQAMEVKAFAETHIKGFTLNDAANSRLIITQVRRDYLKEAVTTLKTVLDQQQTPSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DYFTQAMEVKAFAETHIKGFTLNDAANSRLIITQVRRDYLKEAVTTLKTVLDQQQTPSRL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE2 AVTRVIQALAMKGDVENIEVVQKMLNGLEDSIGLSKMVFINNIALAQIKNNNIDAAIENI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 AVTRVIQALAMKGDVENIEVVQKMLNGLEDSIGLSKMVFINNIALAQIKNNNIDAAIENI 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE2 ENMLTSENKVIEPQYFGLAYLFRKVIEEQLEPAVEKISIMAERLANQFAIYKPVTDFFLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ENMLTSENKVIEPQYFGLAYLFRKVIEEQLEPAVEKISIMAERLANQFAIYKPVTDFFLQ 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE2 LVDAGKVDDARALLQRCGAIAEQTPILLLFLLRNSRKQGKASTVKSVLELIPELNEKEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LVDAGKVDDARALLQRCGAIAEQTPILLLFLLRNSRKQGKASTVKSVLELIPELNEKEEA 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE2 YNSLMKSYVSEKDVTSAKALYEHLTAKNTKLDDLFLKRYASLLKYAGEPVPFIEPPESFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 YNSLMKSYVSEKDVTSAKALYEHLTAKNTKLDDLFLKRYASLLKYAGEPVPFIEPPESFE 1330 1340 1350 1360 1370 1380 1390 pF1KE2 FYAQQLRKLRENSS :::::::::::::: CCDS33 FYAQQLRKLRENSS 1390 1394 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu May 11 11:23:00 2017 done: Thu May 11 11:23:01 2017 Total Scan time: 3.690 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]