FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2702, 429 aa 1>>>pF1KE2702 429 - 429 aa - 429 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6015+/-0.00086; mu= 15.6531+/- 0.051 mean_var=64.1547+/-12.570, 0's: 0 Z-trim(106.0): 8 B-trim: 0 in 0/50 Lambda= 0.160125 statistics sampled from 8722 (8725) to 8722 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.268), width: 16 Scan time: 2.590 The best scores are: opt bits E(32554) CCDS32836.1 FECH gene_id:2235|Hs108|chr18 ( 429) 2909 680.8 7e-196 CCDS11964.1 FECH gene_id:2235|Hs108|chr18 ( 423) 2849 666.9 1e-191 >>CCDS32836.1 FECH gene_id:2235|Hs108|chr18 (429 aa) initn: 2909 init1: 2909 opt: 2909 Z-score: 3630.2 bits: 680.8 E(32554): 7e-196 Smith-Waterman score: 2909; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429) 10 20 30 40 50 60 pF1KE2 MRSLGANMAAALRAAGVLLRDPLASSSWRVCQPWRWKSGAAAAAVTTETAQHAQGAKPQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MRSLGANMAAALRAAGVLLRDPLASSSWRVCQPWRWKSGAAAAAVTTETAQHAQGAKPQV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QPQKRYESNIRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QPQKRYESNIRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 EEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 QCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 VLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRET 370 380 390 400 410 420 pF1KE2 KSFFTSQQL ::::::::: CCDS32 KSFFTSQQL >>CCDS11964.1 FECH gene_id:2235|Hs108|chr18 (423 aa) initn: 2441 init1: 2441 opt: 2849 Z-score: 3555.4 bits: 666.9 E(32554): 1e-191 Smith-Waterman score: 2849; 98.6% identity (98.6% similar) in 429 aa overlap (1-429:1-423) 10 20 30 40 50 60 pF1KE2 MRSLGANMAAALRAAGVLLRDPLASSSWRVCQPWRWKSGAAAAAVTTETAQHAQGAKPQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MRSLGANMAAALRAAGVLLRDPLASSSWRVCQPWRWKSGAAAAAVTTETAQHAQGAKPQV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QPQKRYESNIRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKR ::::: ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QPQKR------KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKR 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 RTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 EEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 EEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLI 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 QCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYC 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQ 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE2 VLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 VLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRET 360 370 380 390 400 410 pF1KE2 KSFFTSQQL ::::::::: CCDS11 KSFFTSQQL 420 429 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Sep 11 12:02:28 2017 done: Mon Sep 11 12:02:29 2017 Total Scan time: 2.590 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]