FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2629, 950 aa 1>>>pF1KE2629 950 - 950 aa - 950 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6755+/-0.00071; mu= 20.3121+/- 0.043 mean_var=80.9054+/-16.159, 0's: 0 Z-trim(111.1): 13 B-trim: 106 in 1/50 Lambda= 0.142589 statistics sampled from 12103 (12112) to 12103 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.372), width: 16 Scan time: 5.420 The best scores are: opt bits E(32554) CCDS53667.1 CARNS1 gene_id:57571|Hs108|chr11 ( 950) 6487 1344.3 0 CCDS44658.1 CARNS1 gene_id:57571|Hs108|chr11 ( 827) 5584 1158.5 0 >>CCDS53667.1 CARNS1 gene_id:57571|Hs108|chr11 (950 aa) initn: 6487 init1: 6487 opt: 6487 Z-score: 7203.9 bits: 1344.3 E(32554): 0 Smith-Waterman score: 6487; 100.0% identity (100.0% similar) in 950 aa overlap (1-950:1-950) 10 20 30 40 50 60 pF1KE2 MLSLDPSGPEWDCPLGSKDLEEEGPWGGGSGLPPTGCFPGSWRQDVGLDCKGSPEGAEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MLSLDPSGPEWDCPLGSKDLEEEGPWGGGSGLPPTGCFPGSWRQDVGLDCKGSPEGAEAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AWTVYYYSLLQSCLQQAGLPETQDRGQVPRTGCPGAEVTLCVLGSPSTFLPVLLEGGVQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 AWTVYYYSLLQSCLQQAGLPETQDRGQVPRTGCPGAEVTLCVLGSPSTFLPVLLEGGVQS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PGNMLLCLSPAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 PGNMLLCLSPAWLMKVPAPGQPGEAALLVSKAVSFHPGGLTFLDDFVPPRRATYFLAGLG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LGPGRGREAAELARDLTCPTGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 LGPGRGREAAELARDLTCPTGASAELARLLEDRLLTRQLLAQQGGVAVPATLAFTYKPPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LLRGGDASLGLRLVELSGKEGQETLVKEEVEAFLRSEALGDILQVAVKLSGWRWRGRQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 LLRGGDASLGLRLVELSGKEGQETLVKEEVEAFLRSEALGDILQVAVKLSGWRWRGRQAW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RLHPRAELGAVVDTVLALLEKLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAVVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 RLHPRAELGAVVDTVLALLEKLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAVVC 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 RTQGDRPLLSKVVCGVGRGDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 RTQGDRPLLSKVVCGVGRGDRPLRHHNSLPRTLEVALAQCGLGEEAQVAAVRQRVKAAAE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 AALAAVLALEAGLSAEQRGGRRAHTDFLGVDFALTAAGGVLTPVALELNGGLCLEACGAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 AALAAVLALEAGLSAEQRGGRRAHTDFLGVDFALTAAGGVLTPVALELNGGLCLEACGAL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 EGLWAAPRLGPAADEAVAAPLVETMLRRSARCLMEGKQLLVVGAGGVSKKFVWEAARDYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 EGLWAAPRLGPAADEAVAAPLVETMLRRSARCLMEGKQLLVVGAGGVSKKFVWEAARDYG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LQLHLVESDPNHFASQLVQTFIHFDMTEHRRDEENARLLAELVRARGLKLDGCFSYWDDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 LQLHLVESDPNHFASQLVQTFIHFDMTEHRRDEENARLLAELVRARGLKLDGCFSYWDDC 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 LVLTALLCQELGLPCSSPAAMRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 LVLTALLCQELGLPCSSPAAMRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEAD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 VERAVHQVPLPGVMKLEFGAGAVGVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 VERAVHQVPLPGVMKLEFGAGAVGVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGN 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 AMLLMEFVEGTEHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 AMLLMEFVEGTEHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 QAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 QAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVM 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE2 VACGLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRLNLLEEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 VACGLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRLNLLEEAL 850 860 870 880 890 900 910 920 930 940 950 pF1KE2 VPGEYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 VPGEYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK 910 920 930 940 950 >>CCDS44658.1 CARNS1 gene_id:57571|Hs108|chr11 (827 aa) initn: 5584 init1: 5584 opt: 5584 Z-score: 6200.8 bits: 1158.5 E(32554): 0 Smith-Waterman score: 5584; 100.0% identity (100.0% similar) in 827 aa overlap (124-950:1-827) 100 110 120 130 140 150 pF1KE2 PGAEVTLCVLGSPSTFLPVLLEGGVQSPGNMLLCLSPAWLMKVPAPGQPGEAALLVSKAV :::::::::::::::::::::::::::::: CCDS44 MLLCLSPAWLMKVPAPGQPGEAALLVSKAV 10 20 30 160 170 180 190 200 210 pF1KE2 SFHPGGLTFLDDFVPPRRATYFLAGLGLGPGRGREAAELARDLTCPTGASAELARLLEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SFHPGGLTFLDDFVPPRRATYFLAGLGLGPGRGREAAELARDLTCPTGASAELARLLEDR 40 50 60 70 80 90 220 230 240 250 260 270 pF1KE2 LLTRQLLAQQGGVAVPATLAFTYKPPGLLRGGDASLGLRLVELSGKEGQETLVKEEVEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LLTRQLLAQQGGVAVPATLAFTYKPPGLLRGGDASLGLRLVELSGKEGQETLVKEEVEAF 100 110 120 130 140 150 280 290 300 310 320 330 pF1KE2 LRSEALGDILQVAVKLSGWRWRGRQAWRLHPRAELGAVVDTVLALLEKLEEEESVLVEAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LRSEALGDILQVAVKLSGWRWRGRQAWRLHPRAELGAVVDTVLALLEKLEEEESVLVEAV 160 170 180 190 200 210 340 350 360 370 380 390 pF1KE2 YPPAQLPCSDGPSPGPGLAVRICAVVCRTQGDRPLLSKVVCGVGRGDRPLRHHNSLPRTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 YPPAQLPCSDGPSPGPGLAVRICAVVCRTQGDRPLLSKVVCGVGRGDRPLRHHNSLPRTL 220 230 240 250 260 270 400 410 420 430 440 450 pF1KE2 EVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRGGRRAHTDFLGVDFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EVALAQCGLGEEAQVAAVRQRVKAAAEAALAAVLALEAGLSAEQRGGRRAHTDFLGVDFA 280 290 300 310 320 330 460 470 480 490 500 510 pF1KE2 LTAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LTAAGGVLTPVALELNGGLCLEACGALEGLWAAPRLGPAADEAVAAPLVETMLRRSARCL 340 350 360 370 380 390 520 530 540 550 560 570 pF1KE2 MEGKQLLVVGAGGVSKKFVWEAARDYGLQLHLVESDPNHFASQLVQTFIHFDMTEHRRDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MEGKQLLVVGAGGVSKKFVWEAARDYGLQLHLVESDPNHFASQLVQTFIHFDMTEHRRDE 400 410 420 430 440 450 580 590 600 610 620 630 pF1KE2 ENARLLAELVRARGLKLDGCFSYWDDCLVLTALLCQELGLPCSSPAAMRLAKQKSLTQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ENARLLAELVRARGLKLDGCFSYWDDCLVLTALLCQELGLPCSSPAAMRLAKQKSLTQLH 460 470 480 490 500 510 640 650 660 670 680 690 pF1KE2 LLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVPLPGVMKLEFGAGAVGVRLVEDAPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVPLPGVMKLEFGAGAVGVRLVEDAPQ 520 530 540 550 560 570 700 710 720 730 740 750 pF1KE2 CHEHFSRITRDLQGEADHPGIGLGWGNAMLLMEFVEGTEHDVDLVLFGGRLLAAFVSDNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 CHEHFSRITRDLQGEADHPGIGLGWGNAMLLMEFVEGTEHDVDLVLFGGRLLAAFVSDNG 580 590 600 610 620 630 760 770 780 790 800 810 pF1KE2 PTRLPGFTETAACMPTGLAPEQEAQMVQAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PTRLPGFTETAACMPTGLAPEQEAQMVQAAFRCCLGCGLLDGVFNVELKLTGAGPRLIEI 640 650 660 670 680 690 820 830 840 850 860 870 pF1KE2 NPRMGGFYLRDWILELYGVDLLLAAVMVACGLRPALPTRPRARGHLVGVMCLVSQHLQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 NPRMGGFYLRDWILELYGVDLLLAAVMVACGLRPALPTRPRARGHLVGVMCLVSQHLQAL 700 710 720 730 740 750 880 890 900 910 920 930 pF1KE2 SSTASRETLQALHDRGLLRLNLLEEALVPGEYEEPYCSVACAGPSPTEARLRLLGLCQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SSTASRETLQALHDRGLLRLNLLEEALVPGEYEEPYCSVACAGPSPTEARLRLLGLCQGL 760 770 780 790 800 810 940 950 pF1KE2 GIDGPSYPVAHFLSHFK ::::::::::::::::: CCDS44 GIDGPSYPVAHFLSHFK 820 950 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:46:35 2016 done: Sat Nov 5 22:46:36 2016 Total Scan time: 5.420 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]