FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2517, 441 aa 1>>>pF1KE2517 441 - 441 aa - 441 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1240+/- 0.001; mu= 13.9966+/- 0.060 mean_var=104.4985+/-21.577, 0's: 0 Z-trim(106.5): 89 B-trim: 62 in 1/50 Lambda= 0.125464 statistics sampled from 8954 (9044) to 8954 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.278), width: 16 Scan time: 2.480 The best scores are: opt bits E(32554) CCDS8273.1 EED gene_id:8726|Hs108|chr11 ( 441) 3073 567.2 1.1e-161 CCDS76463.1 EED gene_id:8726|Hs108|chr11 ( 466) 2224 413.5 2.2e-115 CCDS81612.1 EED gene_id:8726|Hs108|chr11 ( 361) 1655 310.5 1.8e-84 >>CCDS8273.1 EED gene_id:8726|Hs108|chr11 (441 aa) initn: 3073 init1: 3073 opt: 3073 Z-score: 3015.9 bits: 567.2 E(32554): 1.1e-161 Smith-Waterman score: 3073; 100.0% identity (100.0% similar) in 441 aa overlap (1-441:1-441) 10 20 30 40 50 60 pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 370 380 390 400 410 420 430 440 pF1KE2 DSSILIAVCDDASIWRWDRLR ::::::::::::::::::::: CCDS82 DSSILIAVCDDASIWRWDRLR 430 440 >>CCDS76463.1 EED gene_id:8726|Hs108|chr11 (466 aa) initn: 2223 init1: 2223 opt: 2224 Z-score: 2185.1 bits: 413.5 E(32554): 2.2e-115 Smith-Waterman score: 3013; 94.6% identity (94.6% similar) in 466 aa overlap (1-441:1-466) 10 20 30 40 50 60 pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 250 260 270 280 290 300 310 320 330 pF1KE2 TRDIHRNYVDCVRWLGDLILSKS-------------------------CENAIVCWKPGK ::::::::::::::::::::::: :::::::::::: CCDS76 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 370 380 390 400 410 420 400 410 420 430 440 pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR :::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 430 440 450 460 >>CCDS81612.1 EED gene_id:8726|Hs108|chr11 (361 aa) initn: 1655 init1: 1655 opt: 1655 Z-score: 1630.0 bits: 310.5 E(32554): 1.8e-84 Smith-Waterman score: 2340; 81.9% identity (81.9% similar) in 441 aa overlap (1-441:1-361) 10 20 30 40 50 60 pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS :: CCDS81 SA---------------------------------------------------------- 310 320 330 340 350 360 pF1KE2 TRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ :::::::::::::::::::::::::::::::::::::: CCDS81 ----------------------SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 250 260 270 280 370 380 390 400 410 420 pF1KE2 CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 290 300 310 320 330 340 430 440 pF1KE2 DSSILIAVCDDASIWRWDRLR ::::::::::::::::::::: CCDS81 DSSILIAVCDDASIWRWDRLR 350 360 441 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 02:47:04 2016 done: Tue Nov 8 02:47:05 2016 Total Scan time: 2.480 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]