FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3432, 808 aa 1>>>pF1KE3432 808 - 808 aa - 808 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.0982+/-0.000411; mu= -0.2937+/- 0.026 mean_var=262.4669+/-53.635, 0's: 0 Z-trim(120.4): 24 B-trim: 1658 in 1/57 Lambda= 0.079166 statistics sampled from 35497 (35521) to 35497 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.416), width: 16 Scan time: 11.420 The best scores are: opt bits E(85289) NP_006161 (OMIM: 164031) probable 28S rRNA (cytosi ( 808) 5328 622.2 2.7e-177 NP_001028886 (OMIM: 164031) probable 28S rRNA (cyt ( 808) 5328 622.2 2.7e-177 NP_001245237 (OMIM: 164031) probable 28S rRNA (cyt ( 812) 5310 620.2 1.1e-176 XP_005253748 (OMIM: 164031) PREDICTED: probable 28 ( 812) 5310 620.2 1.1e-176 NP_001245238 (OMIM: 164031) probable 28S rRNA (cyt ( 845) 4319 507.0 1.4e-142 NP_001245239 (OMIM: 164031) probable 28S rRNA (cyt ( 628) 3920 461.4 5.7e-129 NP_683759 (OMIM: 615732) probable 28S rRNA (cytosi ( 466) 380 57.0 2.3e-07 NP_001161819 (OMIM: 615732) probable 28S rRNA (cyt ( 470) 378 56.7 2.7e-07 NP_001161820 (OMIM: 615732) probable 28S rRNA (cyt ( 391) 371 55.9 4e-07 NP_060514 (OMIM: 615732) probable 28S rRNA (cytosi ( 429) 371 55.9 4.4e-07 NP_001243057 (OMIM: 615394) 5-methylcytosine rRNA ( 335) 262 43.4 0.002 NP_001243056 (OMIM: 615394) 5-methylcytosine rRNA ( 335) 262 43.4 0.002 NP_950245 (OMIM: 615394) 5-methylcytosine rRNA met ( 384) 262 43.4 0.0022 >>NP_006161 (OMIM: 164031) probable 28S rRNA (cytosine(4 (808 aa) initn: 5328 init1: 5328 opt: 5328 Z-score: 3304.0 bits: 622.2 E(85289): 2.7e-177 Smith-Waterman score: 5328; 99.9% identity (99.9% similar) in 808 aa overlap (1-808:1-808) 10 20 30 40 50 60 pF1KE3 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 APKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 APKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MVNHGDLWGSEDDADMVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEE ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: NP_006 MVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 TEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 TNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 PSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPPKGTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPPKGTD 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 TQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGPQPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGPQPPT 730 740 750 760 770 780 790 800 pF1KE3 VSPIRSSRPPPAKRKKSQSRGNSQLLLS :::::::::::::::::::::::::::: NP_006 VSPIRSSRPPPAKRKKSQSRGNSQLLLS 790 800 >>NP_001028886 (OMIM: 164031) probable 28S rRNA (cytosin (808 aa) initn: 5328 init1: 5328 opt: 5328 Z-score: 3304.0 bits: 622.2 E(85289): 2.7e-177 Smith-Waterman score: 5328; 99.9% identity (99.9% similar) in 808 aa overlap (1-808:1-808) 10 20 30 40 50 60 pF1KE3 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 APKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MVNHGDLWGSEDDADMVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEE ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: NP_001 MVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 TEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 TNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 PSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPPKGTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPPKGTD 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 TQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGPQPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGPQPPT 730 740 750 760 770 780 790 800 pF1KE3 VSPIRSSRPPPAKRKKSQSRGNSQLLLS :::::::::::::::::::::::::::: NP_001 VSPIRSSRPPPAKRKKSQSRGNSQLLLS 790 800 >>NP_001245237 (OMIM: 164031) probable 28S rRNA (cytosin (812 aa) initn: 4840 init1: 4840 opt: 5310 Z-score: 3292.9 bits: 620.2 E(85289): 1.1e-176 Smith-Waterman score: 5310; 99.4% identity (99.4% similar) in 812 aa overlap (1-808:1-812) 10 20 30 40 50 60 pF1KE3 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 APKTNKSPEAKPLPGKLPKG----AVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDS :::::::::::::::::::: :::::::::::::::::::::::::::::::::::: NP_001 APKTNKSPEAKPLPGKLPKGISAGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDS 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 EEDGMVNHGDLWGSEDDADMVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQW ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: NP_001 EEDGMVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQW 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 SEEETEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SEEETEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVH 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE3 KRIQDIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRIQDIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEF 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 LEANEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LEANEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPE 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE3 YLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAE 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE3 RLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKD 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE3 EKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLV 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE3 PTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSE 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE3 TATPTNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TATPTNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSE 610 620 630 640 650 660 660 670 680 690 700 710 pF1KE3 LSTVPSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSTVPSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPP 670 680 690 700 710 720 720 730 740 750 760 770 pF1KE3 KGTDTQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KGTDTQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGP 730 740 750 760 770 780 780 790 800 pF1KE3 QPPTVSPIRSSRPPPAKRKKSQSRGNSQLLLS :::::::::::::::::::::::::::::::: NP_001 QPPTVSPIRSSRPPPAKRKKSQSRGNSQLLLS 790 800 810 >>XP_005253748 (OMIM: 164031) PREDICTED: probable 28S rR (812 aa) initn: 4840 init1: 4840 opt: 5310 Z-score: 3292.9 bits: 620.2 E(85289): 1.1e-176 Smith-Waterman score: 5310; 99.4% identity (99.4% similar) in 812 aa overlap (1-808:1-812) 10 20 30 40 50 60 pF1KE3 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 APKTNKSPEAKPLPGKLPKG----AVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDS :::::::::::::::::::: :::::::::::::::::::::::::::::::::::: XP_005 APKTNKSPEAKPLPGKLPKGISAGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDS 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 EEDGMVNHGDLWGSEDDADMVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQW ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: XP_005 EEDGMVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQW 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 SEEETEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SEEETEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVH 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE3 KRIQDIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KRIQDIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEF 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 LEANEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LEANEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPE 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE3 YLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 YLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAE 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE3 RLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKD 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE3 EKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLV 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE3 PTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSE 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE3 TATPTNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TATPTNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSE 610 620 630 640 650 660 660 670 680 690 700 710 pF1KE3 LSTVPSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LSTVPSVTKTQASSSFQDSSQPAGKAEGIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPP 670 680 690 700 710 720 720 730 740 750 760 770 pF1KE3 KGTDTQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KGTDTQTPAVLSPSKTQATLKPKDHHQPLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGP 730 740 750 760 770 780 780 790 800 pF1KE3 QPPTVSPIRSSRPPPAKRKKSQSRGNSQLLLS :::::::::::::::::::::::::::::::: XP_005 QPPTVSPIRSSRPPPAKRKKSQSRGNSQLLLS 790 800 810 >>NP_001245238 (OMIM: 164031) probable 28S rRNA (cytosin (845 aa) initn: 4826 init1: 4309 opt: 4319 Z-score: 2680.9 bits: 507.0 E(85289): 1.4e-142 Smith-Waterman score: 5201; 95.5% identity (95.5% similar) in 840 aa overlap (6-808:6-845) 10 20 30 40 50 60 pF1KE3 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 APKTNKSPEAKPLPGKLPKG----AVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDS :::::::::::::::::::: :::::::::::::::::::::::::::::::::::: NP_001 APKTNKSPEAKPLPGKLPKGISAGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDS 70 80 90 100 110 120 120 130 140 150 pF1KE3 EEDGMVNHGDLWGSEDDADMVDDYGADSNSEDEEEGEA---------------------- ::::::::::::::::::: :::::::::::::::::: NP_001 EEDGMVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEAAGVQWLGLGSLQPPPPGFKQFS 130 140 150 160 170 180 160 170 180 190 200 pF1KE3 -----------LLPIERAARKQKAREAAAGIQWSEEETEDEEEEKEVTPESGPPKVEEAD ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CLSFPSSWDLQLLPIERAARKQKAREAAAGIQWSEEETEDEEEEKEVTPESGPPKVEEAD 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE3 GGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQDIVGILRDFGAQREEGRSRSEYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQDIVGILRDFGAQREEGRSRSEYL 250 260 270 280 290 300 270 280 290 300 310 320 pF1KE3 NRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQA 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE3 LINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHER 370 380 390 400 410 420 390 400 410 420 430 440 pF1KE3 ILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQF 430 440 450 460 470 480 450 460 470 480 490 500 pF1KE3 PKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSK 490 500 510 520 530 540 510 520 530 540 550 560 pF1KE3 TGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSLRSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSLRSTR 550 560 570 580 590 600 570 580 590 600 610 620 pF1KE3 RFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKSENSSQPAKKAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKSENSSQPAKKAK 610 620 630 640 650 660 630 640 650 660 670 680 pF1KE3 GAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVPSVTKTQASSSFQDSSQPAGKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVPSVTKTQASSSFQDSSQPAGKAE 670 680 690 700 710 720 690 700 710 720 730 740 pF1KE3 GIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPPKGTDTQTPAVLSPSKTQATLKPKDHHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIREPKVTGKLKQRSPKLQSSKKVAFLRQNAPPKGTDTQTPAVLSPSKTQATLKPKDHHQ 730 740 750 760 770 780 750 760 770 780 790 800 pF1KE3 PLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGPQPPTVSPIRSSRPPPAKRKKSQSRGNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLGRAKGVEKQQLPEQPFEKAAFQKQNDTPKGPQPPTVSPIRSSRPPPAKRKKSQSRGNS 790 800 810 820 830 840 pF1KE3 QLLLS ::::: NP_001 QLLLS >>NP_001245239 (OMIM: 164031) probable 28S rRNA (cytosin (628 aa) initn: 3920 init1: 3920 opt: 3920 Z-score: 2436.5 bits: 461.4 E(85289): 5.7e-129 Smith-Waterman score: 3920; 99.8% identity (99.8% similar) in 592 aa overlap (1-592:1-592) 10 20 30 40 50 60 pF1KE3 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 APKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MVNHGDLWGSEDDADMVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEE ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: NP_001 MVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 TEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATP :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTDGVLLCRS 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 TNVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTV NP_001 GWTAVVQSQLIATSTFQVQAILVPQTPK 610 620 >>NP_683759 (OMIM: 615732) probable 28S rRNA (cytosine-C (466 aa) initn: 276 init1: 232 opt: 380 Z-score: 253.3 bits: 57.0 E(85289): 2.3e-07 Smith-Waterman score: 395; 31.6% identity (55.4% similar) in 354 aa overlap (299-625:131-460) 270 280 290 300 310 320 pF1KE3 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG :...:: : :.::::: :... . .: NP_683 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG 110 120 130 140 150 330 340 350 360 370 pF1KE3 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP . :: : :: :.:. ... . : : ::: .:: .: :: NP_683 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP 160 170 180 190 200 210 380 390 400 410 420 430 pF1KE3 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN .: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::. NP_683 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC 220 230 240 250 260 270 440 450 460 470 480 pF1KE3 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC ... : : : . : .::: :::.:. :. .:.. : . . . NP_683 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL 280 290 300 310 320 330 490 500 510 520 530 540 pF1KE3 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD : .:.. : :. : . ::: :::. :::: :: ::.. ::.:. NP_683 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA 340 350 360 370 380 550 560 570 580 590 600 pF1KE3 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT . ..:.. : :. . : :.: .:::.: ... .:.: . ......: NP_683 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVE--VPSSAS-QAKASAPE 390 400 410 420 430 440 610 620 630 640 650 660 pF1KE3 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP . :. :: .. .: . : :: NP_683 RT--PSPAPKRKKRQQ--RAAAGACTPPCT 450 460 >>NP_001161819 (OMIM: 615732) probable 28S rRNA (cytosin (470 aa) initn: 276 init1: 232 opt: 378 Z-score: 252.0 bits: 56.7 E(85289): 2.7e-07 Smith-Waterman score: 380; 33.0% identity (54.9% similar) in 324 aa overlap (299-595:131-434) 270 280 290 300 310 320 pF1KE3 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG :...:: : :.::::: :... . .: NP_001 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG 110 120 130 140 150 330 340 350 360 370 pF1KE3 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP . :: : :: :.:. ... . : : ::: .:: .: :: NP_001 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP 160 170 180 190 200 210 380 390 400 410 420 430 pF1KE3 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN .: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::. NP_001 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC 220 230 240 250 260 270 440 450 460 470 480 pF1KE3 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC ... : : : . : .::: :::.:. :. .:.. : . . . NP_001 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL 280 290 300 310 320 330 490 500 510 520 530 540 pF1KE3 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD : .:.. : :. : . ::: :::. :::: :: ::.. ::.:. NP_001 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA 340 350 360 370 380 550 560 570 580 590 600 pF1KE3 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT . ..:.. : :. . : :.: .:::.: ... .: : ::.: NP_001 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERV--EVP-SLTGQSISTRTH 390 400 410 420 430 440 610 620 630 640 650 660 pF1KE3 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP NP_001 TQPSPKEKEETAKSRSRCLHTALHIAEAPG 450 460 470 >>NP_001161820 (OMIM: 615732) probable 28S rRNA (cytosin (391 aa) initn: 276 init1: 232 opt: 371 Z-score: 248.8 bits: 55.9 E(85289): 4e-07 Smith-Waterman score: 373; 32.8% identity (55.0% similar) in 311 aa overlap (299-582:93-386) 270 280 290 300 310 320 pF1KE3 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG :...:: : :.::::: :... . .: NP_001 EKKLRPHLAKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG 70 80 90 100 110 120 330 340 350 360 370 pF1KE3 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP . :: : :: :.:. ... . : : ::: .:: .: :: NP_001 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP 130 140 150 160 170 180 380 390 400 410 420 430 pF1KE3 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN .: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::. NP_001 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC 190 200 210 220 230 240 440 450 460 470 480 pF1KE3 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC ... : : : . : .::: :::.:. :. .:.. : . . . NP_001 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL 250 260 270 280 290 490 500 510 520 530 540 pF1KE3 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD : .:.. : :. : . ::: :::. :::: :: ::.. ::.:. NP_001 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA 300 310 320 330 340 350 550 560 570 580 590 600 pF1KE3 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT . ..:.. : :. . : :.: .:::.: ... NP_001 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVEVPR 360 370 380 390 610 620 630 640 650 660 pF1KE3 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP >>NP_060514 (OMIM: 615732) probable 28S rRNA (cytosine-C (429 aa) initn: 276 init1: 232 opt: 371 Z-score: 248.2 bits: 55.9 E(85289): 4.4e-07 Smith-Waterman score: 373; 32.8% identity (55.0% similar) in 311 aa overlap (299-582:131-424) 270 280 290 300 310 320 pF1KE3 DLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRG :...:: : :.::::: :... . .: NP_060 RLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFV--RVNTLKTCSDDVVDYFKRQG 110 120 130 140 150 330 340 350 360 370 pF1KE3 VN-------LDPL----GKWSKTG-----LVVYDSSVPIGATPEYLAGHYMLQGASSMLP . :: : :: :.:. ... . : : ::: .:: .: :: NP_060 FSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLP 160 170 180 190 200 210 380 390 400 410 420 430 pF1KE3 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTN .: : : ...: : :::.:::..: :.:: : :.: : .:.:: :.. : : ::. NP_060 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC 220 230 240 250 260 270 440 450 460 470 480 pF1KE3 TIISHYDGRQFPKVVGGFDR------VLLDAPCSGTGVISK---DPAVKTNKDEKDILRC ... : : : . : .::: :::.:. :. .:.. : . . . NP_060 CELAEED---FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHAL 280 290 300 310 320 330 490 500 510 520 530 540 pF1KE3 AHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKR--NVRLVPTGLD : .:.. : :. : . ::: :::. :::: :: ::.. ::.:. NP_060 AGFQQRALCHAL-----TFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA 340 350 360 370 380 550 560 570 580 590 600 pF1KE3 FGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPT . ..:.. : :. . : :.: .:::.: ... NP_060 WPHRGLSTF------PGAEHCLRASPETTLSSGFFVAVIERVEVPR 390 400 410 420 610 620 630 640 650 660 pF1KE3 NVDLPQVIPKSENSSQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELSTVP 808 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:37:01 2016 done: Sun Nov 6 01:37:03 2016 Total Scan time: 11.420 Total Display time: 0.200 Function used was FASTA [36.3.4 Apr, 2011]