Result of FASTA (ccds) for
pFN21AE2061
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2061, 705 aa
1>>>pF1KE2061 705 - 705 aa - 705 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 15.6978+/-0.00125; mu= -22.7751+/- 0.076
mean_var=805.5019+/-164.180, 0's: 0 Z-trim(117.9): 89 B-trim: 0 in 0/54
Lambda= 0.045190
statistics sampled from 18622 (18704) to 18622 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.575), width: 16
Scan time: 3.820
The best scores are: opt bits E(32554)
CCDS14280.1 SYN1 gene_id:6853|Hs108|chrX ( 705) 4884 333.7 5.5e-91
CCDS35233.1 SYN1 gene_id:6853|Hs108|chrX ( 669) 4601 315.3 1.9e-85
CCDS74900.1 SYN2 gene_id:6854|Hs108|chr3 ( 582) 2173 156.9 7.7e-38
CCDS74901.1 SYN2 gene_id:6854|Hs108|chr3 ( 478) 2072 150.2 6.5e-36
CCDS13908.1 SYN3 gene_id:8224|Hs108|chr22 ( 580) 1883 138.0 3.8e-32
>>CCDS14280.1 SYN1 gene_id:6853|Hs108|chrX (705 aa)
initn: 4884 init1: 4884 opt: 4884 Z-score: 1746.9 bits: 333.7 E(32554): 5.5e-91
Smith-Waterman score: 4884; 100.0% identity (100.0% similar) in 705 aa overlap (1-705:1-705)
10 20 30 40 50 60
pF1KE2 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 LQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 TRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQL
610 620 630 640 650 660
670 680 690 700
pF1KE2 NKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
:::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
670 680 690 700
>>CCDS35233.1 SYN1 gene_id:6853|Hs108|chrX (669 aa)
initn: 5020 init1: 4601 opt: 4601 Z-score: 1647.5 bits: 315.3 E(32554): 1.9e-85
Smith-Waterman score: 4601; 99.7% identity (99.8% similar) in 663 aa overlap (1-663:1-663)
10 20 30 40 50 60
pF1KE2 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 LQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 TRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 TRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQL
610 620 630 640 650 660
670 680 690 700
pF1KE2 NKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
. :
CCDS35 KASPAQAQP
>>CCDS74900.1 SYN2 gene_id:6854|Hs108|chr3 (582 aa)
initn: 1739 init1: 1739 opt: 2173 Z-score: 792.8 bits: 156.9 E(32554): 7.7e-38
Smith-Waterman score: 2252; 54.8% identity (69.7% similar) in 710 aa overlap (1-705:2-582)
10 20 30 40 50
pF1KE2 MNYLRRRLSDSNFMANLPNGYMTDLQRPQP----PPPPPGAHSPGATPGPGTATAERSS
::.::::::::.:.::::::::::::::.: :::::: . .:. .: ::.
CCDS74 MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 GVAPAASPAA-PSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASR
::..:: :.: : :..::::::.:::::.:.:. . .. . . .:.: ..
CCDS74 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLV---DAPAPAPAAAR---KAK
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 VLLVIDEPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKV
::::.::::.:::: :.:::. :. ::::::::::.:::::::.: ..:::.:::::.::
CCDS74 VLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 VRSLKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVR
:::..:::::::::::.::.: :.: :.::.::::.::.:::.:.::::::::::::.:
CCDS74 VRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 LHKKLGTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASV
..: :: :.::::.::.::::::::. :.:::::.::::::::::::.:..::::::::
CCDS74 IYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE2 VALTKTYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYK
::::.::::::::::.:::.::::::.:::::::::.:::::::::::::::::::::::
CCDS74 VALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYK
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE2 LWVDTCSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKM
::::::::.:::::::::.:.:::::.:.:.::. ::::::.:: ::.:::.:::..::
CCDS74 LWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKM
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE2 AQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGP
: : .: :: : : :. :.: . .. :: ::::::::: ::
CCDS74 NQLL--SRTPALSPQRPLTTQQPQSGTL----KDPDSSKTPP--QRPPPQGGPGQP----
420 430 440 450 460
480 490 500 510 520 530
pF1KE2 QRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSR
: . :: . :: ..: :: : :: :.:. .. .:..:: .:
CCDS74 QGMQPPGKVLPP----RRL----PP-GPSLP-----PSSSSSSSSSSSAP--------QR
470 480 490 500
540 550 560 570 580 590
pF1KE2 PVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKP
: ::: . : :.: : .: :: :. :::::
CCDS74 P--GGPTTHGDA--PSSSSSLAEAQPPLAA-------------------------PPQKP
510 520 530
600 610 620 630 640 650
pF1KE2 PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGG
CCDS74 Q-----------------------------------------------------------
660 670 680 690 700
pF1KE2 PPHPQLNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
:::::::::::::::.. : . : : ..::.::::::::::::::::::
CCDS74 -PHPQLNKSQSLTNAFSFSESSFFRSSANEDEAKAETIRSLRKSFASLFSD
540 550 560 570 580
>>CCDS74901.1 SYN2 gene_id:6854|Hs108|chr3 (478 aa)
initn: 1707 init1: 1707 opt: 2072 Z-score: 758.3 bits: 150.2 E(32554): 6.5e-36
Smith-Waterman score: 2072; 66.6% identity (84.5% similar) in 470 aa overlap (1-465:2-457)
10 20 30 40 50
pF1KE2 MNYLRRRLSDSNFMANLPNGYMTDLQRPQP----PPPPPGAHSPGATPGPGTATAERSS
::.::::::::.:.::::::::::::::.: :::::: . .:. .: ::.
CCDS74 MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 GVAPAASPAA-PSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASR
::..:: :.: : :..::::::.:::::.:.:. . .. . . .:.: ..
CCDS74 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLV---DAPAPAPAAAR---KAK
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 VLLVIDEPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKV
::::.::::.:::: :.:::. :. ::::::::::.:::::::.: ..:::.:::::.::
CCDS74 VLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 VRSLKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVR
:::..:::::::::::.::.: :.: :.::.::::.::.:::.:.::::::::::::.:
CCDS74 VRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 LHKKLGTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASV
..: :: :.::::.::.::::::::. :.:::::.::::::::::::.:..::::::::
CCDS74 IYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE2 VALTKTYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYK
::::.::::::::::.:::.::::::.:::::::::.:::::::::::::::::::::::
CCDS74 VALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYK
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE2 LWVDTCSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKM
::::::::.:::::::::.:.:::::.:.:.::. ::::::.:: ::.:::.:::..::
CCDS74 LWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKM
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE2 AQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGP
: : .: :: : : :. :.: . .. :: :::::::
CCDS74 NQLL--SRTPALSPQRPLTTQQPQSGTL----KDPDSSKTPP--QRPPPQGCLQYILDCN
420 430 440 450 460
480 490 500 510 520 530
pF1KE2 QRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSR
CCDS74 GIAVGPKQVQAS
470
>>CCDS13908.1 SYN3 gene_id:8224|Hs108|chr22 (580 aa)
initn: 1816 init1: 1274 opt: 1883 Z-score: 690.6 bits: 138.0 E(32554): 3.8e-32
Smith-Waterman score: 2090; 52.3% identity (68.9% similar) in 710 aa overlap (1-705:1-580)
10 20 30 40 50 60
pF1KE2 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA
::.::::::::.::::::::::::::::. ..: .:.. . :: :
CCDS13 MNFLRRRLSDSSFMANLPNGYMTDLQRPD-----------SSTSSPASPAMERRHPQPLA
10 20 30 40
70 80 90 100 110 120
pF1KE2 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID
:: . ::::: .:::::.:.::. :... . : : .. . : :.:::::
CCDS13 ASFS--SPGSS----LFSSLSSAMKQAPQATSGLM-EPPGPSTPIVQR----PRILLVID
50 60 70 80 90
130 140 150 160 170
pF1KE2 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVV-RSLK
. ::::.:::.:::..:::.:.:::::::.:::.:...:: :::.:.:::.::: ::.:
CCDS13 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 PDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKL
:::.:.::::.::: . :::::::::::.:.:.::::.::::::.:::::.:.... ..:
CCDS13 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE2 GTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTK
: :.:::..:::.:::: :... .:::::.::::.::::.::.:: :::::.::::..:
CCDS13 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE2 TYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDT
::::.: :::.:::.:.::::.:::::::::.:::::.:::::::::.::..::.::::.
CCDS13 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS
280 290 300 310 320 330
360 370 380 390 400 410
pF1KE2 CSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALP
:::.:::::::::.:.:.:::::.::::. :::::::.: .::.::...:::.::.: ::
CCDS13 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQ-LP
340 350 360 370 380 390
420 430 440 450 460 470
pF1KE2 RQRQRDASPGRGSHGQ---TPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQP-GPGPQ
:: : : . ::: :: : .: : : :::::::: : .: ::
CCDS13 MPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ----P--QPRPPPQGGPRQAQSPQPQ
400 410 420 430 440 450
480 490 500 510 520 530
pF1KE2 RQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP
:.: : ::: ::::: :: : .::: :: :
CCDS13 RSGSPSQQRLSPQGQQPLS---PQSGSPQQQRSP--------------------------
460 470 480
540 550 560 570 580 590
pF1KE2 VAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP
: :: .: .: : .: .:: ::
CCDS13 -----------------------GSPQLSRASS--GSSPNQAS--------------KP-
490 500
600 610 620 630 640 650
pF1KE2 GPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGP
: : ::: : : : :.:: . : .::. :
CCDS13 ---GAT-LASQPRP-PVQGRSTSQQGEES-------------KKPA-------------P
510 520 530
660 670 680 690 700
pF1KE2 PHPQLNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
:::.:::::::::... . . : . :.::.::::::.:::::::::::
CCDS13 PHPHLNKSQSLTNSLSTSDTSQ-RGTPSEDEAKAETIRNLRKSFASLFSD
540 550 560 570 580
705 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Jan 30 10:04:48 2017 done: Mon Jan 30 10:04:49 2017
Total Scan time: 3.820 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]